Basic Information

Gene Symbol
osa
Assembly
GCA_035041605.1
Location
JAWNLA010000091.1:11849656-11871162[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7 1.2e+04 -3.3 0.1 16 46 792 825 787 827 0.79
2 2 2.2e-24 3.7e-21 75.2 0.0 3 89 1038 1124 1036 1124 0.91

Sequence Information

Coding Sequence
atgaatgaaaaaataaaatcgccCTCGGCTGGTGGCGCTGGTGGTGTTGGCGGTGCAGCTAATGCGGCCGCAACGGTTGCAGCCAGCGCTGCttctggtggtggtggcgtcACACCGCCCACGTCGGGCCCGCCCACGCCAAACAACGGCAACGATCCCaacatacagcaacaacagcagcagcaacaacaacaacagcagcagcaacaacaacaacaaggtgGTCCCTTGCCCCATCCCTATGGCGGGCCACCAGCGCCAGGTGCACCAAATGATCCGGCCGCTGCAGCCATGTCCCACTATCACCATctacatcaacagcaacaacaacagcagcagcatccacaagGCCCACCAATGCCGCCACATATGCAGCATCATGGTggaccaccgccgccgccgccacagggaccactgccgctgccgccagAGCATGCGGCCGGTGTCAAGGATGAATATGGATCCTCGGGACAtttgccaccaccaccgccgcatGCACATCCCGCCTATGCGCGTTATCACTCCGCCGATCCCAATATGGATCCCTATCGCTATCAGCCACCGCCTGGCGGCAAACCGccgcaccagcaacaacaacagccacaaggTGGTGCACCGGGAGGCTCACCAAATCGACCgccgccacagcaacagcagcaacgctaTATACCGGGACAGCCGCCTCAGGGTCCAACGCCCACATTGAATTCACTGCTGCAATCGTCGAATCCGCCGCCTCTGCCGCAACATCGATACGCCAACAACTACGActcgcagcagcaggcggccaatgcagctgcagcagcggcagcagcagcccaacaacagcagcaacaacagcagcagcaacaacaacagcatcaacaaaatgcacaacagcagcagcaaccggtCGGACCACCAGGCGGACCACCAATTCCCGGCCATggtccaccgccgccgccgccacaaCATCAGCCATACGGTGCGCAACAGGGCGGCTGGGCACCACCACCAAGGCCCTACAGTCCACAGCTGGGCTCCGCGTATAGGACACCGCCACCGTCAAATACATCCAGAGGTCAATCACCATATCCGCCAGCTCACAGTCAAAACTCAGGTTCCTATCCAAGTTcgccccaacaacaacaacaacagcagcaggcccaacaacaacaacagcaggcggGACAACAGTCCGGTGGAGTTGGCGCACCCGGAGCGCCGGCGCCACCACCCGGCcccacacagcaacaacaacagcagcagcaaaacacacCGCCCACTTCTCAATATTCGCCGTACCCGCAAAGATACCCAACACCACCAGGTCTACCGGCGACCGGGCCCAATCATCGAACTGCCTACACAACGCACCAGTATCCCGAACCAAATCGACCGTGGCCGGGCGGCTCATCGCCAAGTCCTGGTCCTGGCCATCCATTGCCGCCTGCCTCACCGCATCATGCACCGCTACAGCAACCGCCAACGCCACATGCCGCTGGTGGTGGTCCGCCACCCAGCAGCAGTCCGGGTCATGCACCGAGTCCATCGCCGCAGCCCTCGCAGGCATCACCATCGCCGCATcagGAGCTGATTGGACAGAATAGTAACGATAGTTCAAGTGGCGGAGCACACAGTGGCATGGGCTCTGGTCCGCCCGGCACGCCAAATCCACAGCAAGTGATGAGGCCAACACCCTCGCCAACTGGCTCCTCGGGCTCCAGATCAATGTCTCCTGCAGTGGCACAAAATCATCCAATCTCGCGACCGGCGAGTAATCAGTCAAGTAGTGGCGGTCCaatgcagcagccaacagtGGTTGGTGGCCCGCCACCGATGCCACCACACGGTCTACCAGGTGGGCCACCATCTCAGCAACaatctcagcagcagcaacaggcatcAAATTCAGCATCGTCGGCGAGTAATTCGCCGCAACAGACGCCTCCGCCAGCACCGCCGccaaatcaaaatgttaacAATATGGCAACGCCACCACCGCCCCCACAGGGGGCAACAGGTGGCTATCCCATGCCGCAGCATATGCATGCCGGCTACAAAATGGGCATGCCCGGCCAAAATCCCGGCGCACAAGGATATCCACCACAGCAATATCCTCAAGgCAACTATCCGCCACGTCCTCCGTATCCGTCGGGTGCGTATGGAACGGGGCCACCACCGCCTCCGGGCAGTCAACCGGCTGGCGGTGCGAACAGCATGCCATCCAGCGCACAAGCTGGCTACCCACGATCCATGCCCAATCACAGCGGTGGCAGTCCACATCCGCAGTATCCGCCATATCAGTGGGTGCCGCAATCCCCCCAACAATCGGTGCCGGGCGGCGGTGCAGCGGGACAAATTGGACCAGCGATGGGCAACCATGTGCAGGGCAAGGGTACACCACCACCGGTGGGGCCACCGCCTCCCCAAGGCAGTGGTTCGCCACGCCCACTCAACTATCTGAAACAGCATTTACAACACAAAGGTGGATACGGTGCCAATCCAGCTGGTGGTCCGCAGCCCCAGGGCTATGGCAATGGGCCAACTGGCATGCACCCCTCAATGCCAATGGGCCCGCCCCATCATATGGGTCCGCCGCAGAGTATGGGGCCACCGACCAGCACACCGCCACAGTCAATGCTGGGCGTTCCGCCTGGCAGTGACAGCGGCACGGAGCATATATCCCAGGACAATGGCATCAGTTCGTCGGGCTCGTCACCAGCGACGGGTTTGCATGCGGTGACCGCTGTGGTCACGACTGGACCGGATGGCACCCCATTGGATGATGTTAGTCAACAGAGCACGCTCTCAAATGCATCGGCTGCATCGGGCGAAGATCCACAATGTACTACACCAAAGTCGCGCAAACTTGATCCGTATAGCCAAAGCCATTTAGCTCCACCGAGCACTTCGCCACATCCAGTTGTAATGCATGGAGGCGGCGGTGGTCCAACTGGCGAGGAGTACGAAATGAATTCTCCCCCAAACTGGCCACGCCCAGCTGCAAGTTCGCAGGTGTTCAACAGTCATGTTCCTGTTCAACAAGAACCATTTCGTAGCACGATTACGACCACTAAGAAATCCGATTCGCTGTGCAAACTGTACGAGATGGATGACAATCCGGATAGGCGTGGATGGTTGGACAAGCTGCGGGCTTTTATGGAGGAGCGTCGGACACCGATTACCGCGTGTCCGACCATCTCAAAACAGCCACTCGATTTATATaggttatatatttatgtaaaagaACGTGGCGGATTCGTCGAGGTATGCAAGGTGACCAAGAGCAAGACCTGGAAGGATATTGCCGGTCTGCTGGGGATCGGcgcaagcagcagcgctgcGTACACCCTGCGCAAGCACTACACCAAGAATCTGTTGACATTCGAGTGCCACTTTGATCGGGGCGACATCGATCCCCTGCCCATCATTCAGCAGGTGGAGGCGGGCAGCAAGAAAAAGACAACGAAGGCAGCCTCGGTGCCATCACCAGGATCATCGAACTCGCAGGATTCTTTCCCAGCGCCACCGGGCGGCGGTgcaccaaacacaaacatcGATGGCTACACGGGTTATACGGGCGGTGGTGCATATCCACCAACGGCTGGACCACAGCCAGATTATGCTGCAGCGGGACAAATGCCAAGGCCGCCATCGCAAAACAATCCGCAGGCACCGCATCCAGGCACACAAAATCAAgccgctggcgctgctgctgttgttgccggtgATAACATAAATGTGAGCAATCCCTTTGAAGATCCAATTGCTGGCGGTGTGGCcgctggtggtggtgttgctgctgttgcaaatgctgctgccgctgctgctgctgcggcggctgctgctgcaactgcagttggTGGTGCTGCGTCGTCACACGGTGCTCCACCACCGCCCCCACATTCACCGCACACAAACGCGCCACAAACGGCCAatcaacaccaccaacaagtCGGCATTCCAACGCAATTGCCATCGCCGTCACAGCAACCACCGGTGCCaccaccacagcagcaacatggtCCGCCATCGTCGCAGCATGCGCGCCCACCACCAACTGGAGTACCTTATCCACCAGGTAGCTCTGGGTATCCAACGCCTGTGTCTAGAACGCCAGGCTCACCGTATCCAACACAACCCGGTGCTTATGGCCAATATGGTTCTGGCGATCAGTATAATGCCGCTGGCCCGCCCGGCCAGCCATTCGGACCAAATCAGGGACAATATCCGCCGCAGAATCGCAATATGTACCCTCCCTATGGGCCCGAAGGGGAAGCTCCTCCCGCTGGTGCTAATCAGTATGGTCCGTATGGAAATCGACCCTATAGTCAAGCGCCGCCCGGCGGGCCACAGCCACCAGCACAAGCCGTTGCGGGCGGACCACCAACTAGTGGAGCGCCAGTAGCACCACCAAATAGTGGTTATGTACCAACCACTCCCAACCAGCAGGATTACTACAGGCCGCCAGATCAAAGTCCTCAGCCGCGACGACATCCTGACTTTATAAAAGATCCACAATCCTATCCCGGATACGCTGCGCGGCCTCAAATTTACGGTGGTTGGCAAGGCGGCAACCAGCAGTATCGTCCTCAATATCCCACAGCGTCAGCGCCACAATCGTGGGGCAATGGACCACCACGAGGCGCTGCACCACCTGGGGGACCGCATGGTCCGCAcggtcagcagcagccaggtgTGGCACAGTGGGAACAACATCGTTATCCACCGCAACAGCCTCCACCAccgccgcagcaacaacagccgcccTACCAGCAGGCAGGACAGCCGCCTGGGCAGcccccacagcagcagcaacaacagcagcagcagcagcaacaacagcagcagcagcaacaacagcagcagcagcaacagcagcagccggcaccACCACAATGGGCGCAAATCAATGCAGTTCAGGGGCCACCACCGGGAGCGAATATACCGCAGCCGGGCGCATCACTGCGTCCGCCAATGGGCgccgcacaacaacagcagcagcagcaacaacaacagcgcatGCCCAGTGGAGTCCCAGTGATGCCGCCACTGCAGCAGCCCGGTGGTCCGCCGGGTGCAGTGCCACAAGTGCCACACGGAGGTGTACCGCCAGCAGGTATGCCGCCGGTTGCCGGTGGTATGGTGAAGCCACCATATGCGATGCCACCGCCGTCGCAGGCGGGCGGCACCTCGCCCGGTGTGGTGGGCCCAATGGTAGTGGGCAATCCGCCCGGCGCCATGATACCGCAAAAGCAACCGCCCATCGTTGGACCGCAGCAGGGTATGCtgcagcaagtgcaacagcagccgcaacaccAGCCGCCACACCAGCAGCTGGCCCCCAATCAGCAGCAGGTGCCACACCAGCAGCTGCCACCCAATCAGCAGCCGAACTATGCGCCGGTGCAAGTGCCGCCAGGTGCTGCAGGTGCGCAACTGGTGAAGAAGGAGCTGATCTTTCCCCACGACAGTGTGGAGTCGACAACACCGATGCTCTATCGACGCAAACGCCTGACCAAAGTGGATGTCTGTCCCGTGGATCCGTGGCGAATATTTATGGCGATGCGTTCGGGCCTGCTGACGGAGTGCACCTGGGCATTGGATGTGCTGAATGTGTTGCTGTTTGACGACACCACCGTACAGTTCTTTGGCATATCGAATTTGCCGGGCCTGCtaacgctgctgctggagcacTTCCAGAAGAATCTCGCCGAAATGTTCGACGAGCGTTGCGAGGATGCCACAAACAATGACGAAGCGGCCAATaacaatgatgacgatgcGGACAGCGGCACCGTCATGTCCCTGCAGATGGATGACAAACTGaatcagcgacagcagcagcagcgacaggcGGCGACGCGCTGTGTGCGCAGCATCTGCAGCTATAATCGGAAGCGACACTATGAGAACATGGATGTGAAGCAGCAGCGGGAGGATTCCGATGATGCGGACGAGGGCATTGATCTCGGGCAGGTGCGCGTTCAGCCAAATCCCGAGGAGCGTTCACTTCTGCTTTCATTCACGCCCAATTATACGCTGGTCACGCGCAAAGGTGTCCCGGTCCGCATCCAGACTGCTGATCACGACATCTTTGTGGATGAACGCCAAAAGGCCTGGGATATCGATACGAATAAATTGTATGAACAACTGGAGCCGGTGGGCAGCAATGCCTGGACATATGGCTTTACGGAACCGGATCCACTTGATGGCATCATCGATGTGTTTAAATCAGAGATTGTTAACATTCCATTTGCGCGATACGTGcgctcctcctcatcctcctacTCTTCGTACTCAAAGCACAAGGGCGGCAAACCCGAAATCGCACAGAaaaccaccagcaacagcaacaacagcagtagccaCCTGCGGGCAGAGGATATATCGACGGTGCTGATCAAGCAGGAGGACACcacgagcagcagcaccgaAGACAGCAGCTTACTCCAGCAGacgtacaacaaaaaacgacgACTCGTCAGCAGTagtggtggaggtggtggtgaCACCAAGAAATCCAAACTGGGCGACGATGAATTCGCCCAGCCCACGGTGGAGGTGAAAAAGGAGGCGCCCGATGGTGATAATCTGAACGTAGACAGTGATTGTCGTGCCATCGATATGGAAATTGAAtcgccgcaacagcagcagcgactcaCGAATGGAGTTGCCTCACAGCCGAAGGGATTCGATCCAAAGTCAACTGTACGCGATGTAGCGCAAGTGTTGCAACGTCGTCGCGATTCCAGCTATGAGGATGAGTGTTATACGCGCGACGAGGCCTCACTGTATCTGGTGAATGATAGCCAGGACTCGTTGGCTCGCCGCTGCATCGCCCTCTCGAATATCTTTCGCAATCTGACTTTTGTGCCCGGCAACGAAACGGTGCTGGCGAAATCGACCAGATTTCTGGCGGTACTCGGACGCCTGCTGCTCCTCAATCACGATCATTTGCGGCGCACGCCCAAGACGCGCAACTATGACAGGGAGGAGGACACAGACTTTACCGACTCGTGCAGCTCGCTGCAGGGCGAGCGGGAATGGTGGTGGGAATACTTGATAACCATACGCGAGAATATGCTGGTGGCCATGGCGAATATCGCTGGACACTTGGAGCTGTCACGCTACGATGAATTGATTGCCCGTCCACTCATCGATGGCCTGCTCCATTGGGCGGTCTGTCCCAGTGCGCACGGCCAGGATCCGTTTCCGTCGTGCGGTCCCCATTCGGCGCTATCGCCGCAACGTCTCGCCCTCGAGGCACTGTGCAAGCTGTGCGTGACCGATGCGAATGTAGATTTGGTGATAGCGACGCCGCCGTTCTCGCGACTGGAGAAATTGTGTGCGGTGCTGACGCGTCACTTGTGCCGCAATGAAGATCAGGTGTTGCGTGAATTCTCCGTCAATTTGCTGCATTATCTGGCCGCGGCAGACAGTGCAATGGCCCGAACGGTGGCCCTACAATCGCCGTGCATCTCGTATCTGGTGGCATTCATTGAGCAGGCGGAGCAAACGGCGCTGGGCGTTGCCAATCAGAGTGGCATCAATTATCTGCGCGAGAATCCCGACTCGATGGGCACCAGCCTGGACATGTTGCGACGAGCAGCCGGCACCTTACTTCATTTGGCCAAGCATCCCGACAATCGTTCGCTGTTCatgcaacaggagcagcgtCTGCTTGGCCTGGTCATGTCGCACATACTGGACCAGCAGGTGGCATTGATTATATCGCGGGTGCTCTATCAAGTGTCTCGTGGCACTGGACCAATGCATTCGGTTGAATACagattgctgcagcagcgacaacagcaacagcagctacaacaacatcagcagcagcaacaacaacaacagcagcagcaacaacagcggcccagttcggcgacaacaacaataacagctgaGAAGCAGCAAAGTGCGTCCATAAGAACTGAACCCGAACAATCATTGGATGTAAAAGCTTGCAGTGGtaatgcagctgccacaaatgcaacatcaacaacaacagcagcagcggcggcaacaacaacaaccacaacatcaAACGCTGTTatcaacgacgacaacagcaatagcagtcAACAATTGCCACCGGCTGCCACATTCAACGATgtaagcaacagcagcacgaacagcagcagttgcggCACTGTCAGCAGCAATcagacaaacagcagcagcatgggcagcagcagtcagacGGCAACGCTAAACAATTTGATAACGCCgagcgaacagcagcagcagcaagtggtTAAAATGTCAACTGCCTCCCCCTCGTCAGCGACGTCATCTTCCGCATTAACAGCGAACACGTTGAGCAACataaatgcagcagcagccacatcgaattcaacacaacaacaacaagcaacagcacaacagcaacaagcggcggcggcggcagcagcagcagcagcggtggcacAACAAACGGCTGCACCACCGCCAACAAACGCGAATACAACCGCCGCCGTTGCGTAG
Protein Sequence
MNEKIKSPSAGGAGGVGGAANAAATVAASAASGGGGVTPPTSGPPTPNNGNDPNIQQQQQQQQQQQQQQQQQQGGPLPHPYGGPPAPGAPNDPAAAAMSHYHHLHQQQQQQQQHPQGPPMPPHMQHHGGPPPPPPQGPLPLPPEHAAGVKDEYGSSGHLPPPPPHAHPAYARYHSADPNMDPYRYQPPPGGKPPHQQQQQPQGGAPGGSPNRPPPQQQQQRYIPGQPPQGPTPTLNSLLQSSNPPPLPQHRYANNYDSQQQAANAAAAAAAAAQQQQQQQQQQQQQHQQNAQQQQQPVGPPGGPPIPGHGPPPPPPQHQPYGAQQGGWAPPPRPYSPQLGSAYRTPPPSNTSRGQSPYPPAHSQNSGSYPSSPQQQQQQQQAQQQQQQAGQQSGGVGAPGAPAPPPGPTQQQQQQQQNTPPTSQYSPYPQRYPTPPGLPATGPNHRTAYTTHQYPEPNRPWPGGSSPSPGPGHPLPPASPHHAPLQQPPTPHAAGGGPPPSSSPGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHSGMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPTVVGGPPPMPPHGLPGGPPSQQQSQQQQQASNSASSASNSPQQTPPPAPPPNQNVNNMATPPPPPQGATGGYPMPQHMHAGYKMGMPGQNPGAQGYPPQQYPQGNYPPRPPYPSGAYGTGPPPPPGSQPAGGANSMPSSAQAGYPRSMPNHSGGSPHPQYPPYQWVPQSPQQSVPGGGAAGQIGPAMGNHVQGKGTPPPVGPPPPQGSGSPRPLNYLKQHLQHKGGYGANPAGGPQPQGYGNGPTGMHPSMPMGPPHHMGPPQSMGPPTSTPPQSMLGVPPGSDSGTEHISQDNGISSSGSSPATGLHAVTAVVTTGPDGTPLDDVSQQSTLSNASAASGEDPQCTTPKSRKLDPYSQSHLAPPSTSPHPVVMHGGGGGPTGEEYEMNSPPNWPRPAASSQVFNSHVPVQQEPFRSTITTTKKSDSLCKLYEMDDNPDRRGWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLTFECHFDRGDIDPLPIIQQVEAGSKKKTTKAASVPSPGSSNSQDSFPAPPGGGAPNTNIDGYTGYTGGGAYPPTAGPQPDYAAAGQMPRPPSQNNPQAPHPGTQNQAAGAAAVVAGDNINVSNPFEDPIAGGVAAGGGVAAVANAAAAAAAAAAAAATAVGGAASSHGAPPPPPHSPHTNAPQTANQHHQQVGIPTQLPSPSQQPPVPPPQQQHGPPSSQHARPPPTGVPYPPGSSGYPTPVSRTPGSPYPTQPGAYGQYGSGDQYNAAGPPGQPFGPNQGQYPPQNRNMYPPYGPEGEAPPAGANQYGPYGNRPYSQAPPGGPQPPAQAVAGGPPTSGAPVAPPNSGYVPTTPNQQDYYRPPDQSPQPRRHPDFIKDPQSYPGYAARPQIYGGWQGGNQQYRPQYPTASAPQSWGNGPPRGAAPPGGPHGPHGQQQPGVAQWEQHRYPPQQPPPPPQQQQPPYQQAGQPPGQPPQQQQQQQQQQQQQQQQQQQQQQQQQQPAPPQWAQINAVQGPPPGANIPQPGASLRPPMGAAQQQQQQQQQQRMPSGVPVMPPLQQPGGPPGAVPQVPHGGVPPAGMPPVAGGMVKPPYAMPPPSQAGGTSPGVVGPMVVGNPPGAMIPQKQPPIVGPQQGMLQQVQQQPQHQPPHQQLAPNQQQVPHQQLPPNQQPNYAPVQVPPGAAGAQLVKKELIFPHDSVESTTPMLYRRKRLTKVDVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDTTVQFFGISNLPGLLTLLLEHFQKNLAEMFDERCEDATNNDEAANNNDDDADSGTVMSLQMDDKLNQRQQQQRQAATRCVRSICSYNRKRHYENMDVKQQREDSDDADEGIDLGQVRVQPNPEERSLLLSFTPNYTLVTRKGVPVRIQTADHDIFVDERQKAWDIDTNKLYEQLEPVGSNAWTYGFTEPDPLDGIIDVFKSEIVNIPFARYVRSSSSSYSSYSKHKGGKPEIAQKTTSNSNNSSSHLRAEDISTVLIKQEDTTSSSTEDSSLLQQTYNKKRRLVSSSGGGGGDTKKSKLGDDEFAQPTVEVKKEAPDGDNLNVDSDCRAIDMEIESPQQQQRLTNGVASQPKGFDPKSTVRDVAQVLQRRRDSSYEDECYTRDEASLYLVNDSQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHDHLRRTPKTRNYDREEDTDFTDSCSSLQGEREWWWEYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPHSALSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQSGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSRGTGPMHSVEYRLLQQRQQQQQLQQHQQQQQQQQQQQQQRPSSATTTITAEKQQSASIRTEPEQSLDVKACSGNAAATNATSTTTAAAAATTTTTTSNAVINDDNSNSSQQLPPAATFNDVSNSSTNSSSCGTVSSNQTNSSSMGSSSQTATLNNLITPSEQQQQQVVKMSTASPSSATSSSALTANTLSNINAAAATSNSTQQQQATAQQQQAAAAAAAAAAVAQQTAAPPPTNANTTAAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00500087;
90% Identity
iTF_00516775;
80% Identity
-