Basic Information

Insect: Drosophila atripex
Gene Symbol: -
Assembly: GCA_035045925.1
Location: JAWNOP010000069.1:10695386-10705303[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.15 11 6.7 1.5 1 23 1149 1171 1149 1172 0.93

2 8 0.0054 0.42 11.2 0.1 1 23 1177 1200 1177 1200 0.98

3 8 0.0012 0.092 13.3 2.5 2 23 1449 1471 1448 1471 0.95

4 8 0.00058 0.045 14.2 1.3 1 23 1479 1501 1479 1501 0.98

5 8 5.8e-05 0.0045 17.4 0.3 1 23 1508 1531 1508 1531 0.97

6 8 5.1e-05 0.0039 17.6 1.4 1 23 1537 1559 1537 1559 0.96

7 8 5.3e-07 4.1e-05 23.8 2.0 1 23 1564 1586 1564 1586 0.99

8 8 0.00015 0.011 16.1 2.8 1 23 1591 1613 1591 1613 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.15	11	6.7	1.5	1	23	1149	1171	1149	1172	0.93
2	8	0.0054	0.42	11.2	0.1	1	23	1177	1200	1177	1200	0.98
3	8	0.0012	0.092	13.3	2.5	2	23	1449	1471	1448	1471	0.95
4	8	0.00058	0.045	14.2	1.3	1	23	1479	1501	1479	1501	0.98
5	8	5.8e-05	0.0045	17.4	0.3	1	23	1508	1531	1508	1531	0.97
6	8	5.1e-05	0.0039	17.6	1.4	1	23	1537	1559	1537	1559	0.96
7	8	5.3e-07	4.1e-05	23.8	2.0	1	23	1564	1586	1564	1586	0.99
8	8	0.00015	0.011	16.1	2.8	1	23	1591	1613	1591	1613	0.99

Sequence Information

Coding Sequence: ATGGGTGCAATTGTCTCTGCCAAAAAGCAAATAAATCGCGACGATGGACTGCCCCAAGAAATCTGCCGTCAGTGCATGGCTCAGTTTCTGATGGTGGCCAAGTTCCGGCGGAAATGCGTACGGATGCAGCAGCGCCTGCAGGACTTTGCCCAGGAAGTATCTGACCGTCAGGCGGCCAGGCAGGCCAAGCGCgaccagaagcagaagcagctggAAAAGGAGCGAGAGAAGCAAAGGCAGCGACAAAGGGCGGAAGCAGGAGAAGCGACAGAAGCGAGAGAATCGAGagaagcggaaacggaaacggaatcGGAAGTCGAGCAAAAGGTAGCCCAGGAAGCAGAGGAGAAGCCAGTGTCCGTGCCAGTGACTGAGAGAAAGCGCCGCCTGGTCTCTGAGTCGGAGGGTGGGACCAAGTACGAAATCGACAACGAAAGCGAAGATCTGCCGCCGCCAAAGACAAGGCGACTCCAGCTGCGCCTGCGTAAGCTCCGCAGCGTCTCCACCGGCTCCGACGTGGACCAGCAAACGGGTGCCGGCAGCATCGACGCCAGCAGCATGCCCTGGAAGACGAAGGCCGCCCGCAAGGAGATATCCGAGCTGTGGTCCGCCAGCCCCTGCACCACCGAACACTcctcgccgccgccgcccagcACCGGCTCCGATTCGGAAGCCCccagcaccaacagcagcgACCTCAGCGAACTGTCGGTGGGTCCCTGCTGTGGCTTCGCCTCCGACCACCATCCCACCTCCCCCTCCATTTCATCCTTCGGCTCTGGGGACACGATGTCCACCGGTTGTCTGGAGTTCCCACGCACCGTGCCCGTTGAGTTAATGCCGCGCCGGGGCAGGCGGCCGAGAAACGCTCCCATCTACACGTCGGCCAAGAGGGCCAGGCGATCCTTCGCCAAGAAGTCGATGGCGGTTGGCCCTTCGGTGGCCGAAGAGAACACAAAGTCTGATGAAGTACAGGATGGTCTGGCAATGGCAGTGGAGAAGTCCAGTGATCTGGAAGATGAGCTGCCGGAGATGAGGGAGGAAATGCCATTGCTGGAAGAGCAAGCAGAATCAAAGGACTCCAGCGAGGAGAGCTCCAATCCACTGCCAAAAACCGAAGATAGAGACGAAGATGATACTCCTGTGGTACAAAATGGCAAGGAACCAGTTAACATAATCCCTGAAACGAGACTGTCTAATTTATCCGAAAGTAGTACTGAAATTATTCCAAAGACGAGCCCAGAAGATAGAACACCTGAAACAGAGTCAGGTTCCAGTGAGGAGCCTCTGCAATCGGAGGAGCTGACTTCCTCCACCGAATCGGCCGAGAAGGAGCCGAAATCCCCCGAGCAGCCGGGCATCATTGTGAGCATTCCGCTGCATGCTCTGAACGAGGACCTGCACCGCCGCCTCTGCACAGAgccggaggcggaggaggactCGGAGACCCGGGAGACGGCAACGGCCACTCCCAAGTCCGATGATGTCAACAACAATGCGAATGGTGAAAATTTTTGCCAGAGTGCTACAGCAGATAGCTTCAATTCTGCTGTGGCACTCCGAACAGACGACATTGAAGCAGCAACCCCCGACTGTGAACCGGAAGCTGGCGGGCATTTCCGGGCGGATGGAATTCAAAGTGTTGCGGAAACCCCGCCGGACAAAGCCGAAGAGGAGGAAGTGCAGACGGTGCGATCGGGCCACACGCCCATGGACTTTATGGCCGAGTTCGCCAAGCACTGCGAGAGCGGAGTGGAGCAGCTGAAGgccaccactccggcaccgtCGCCGACACCCACCGCCCTGGCACTGCCTCTCCACGATCTCGAGAGCAAGCAACAGCTCGAGGTGGAGATGAACGATGTGGAGAACACGCTGAACGGGATTCTCAACGAGATGCAGGACCAGCACATGTACACCCCGACCTGCTCCCACATCGACGAGTTTCTGACGCCCGCCGACTATGCCCCGCTGACCGAACAGGAGCCCTCCGTCTCGCCACCGAATCCGAATCCCTTCGACCAGAACATGGTGGCCACAACGCCGACGAAAGCCACCCAGAACCAGAACGTGAACCCCTTCGACAACAGCAACTTCAGCAATGAACTGATCGGATTCCAGAACGACATACCTTGTTTTGAGAACATCGCGTCGTCGCCGGAATCCGACCAGAGCTTGCACCTGGAGTTGACGCAGTTCCTCAAGGAGCTGCAGCCGTCGAAGGAGGACTGCAAGACGGAGCCCCAAGTGGAGATCCGTGAGGTGGAGAGTCAAGCGGAGCGCGTCACCGACAACCATACTGAACCACTTGCGCAGCCCCCTATACCGGATCAGATCCAAATCGAATCTCGTGAAGATACCCAAATTGAGTCTCAGTCCCAGATGTTCGTCCAGACGCAGGTGTTTGCGGAACAGAACTCGTCGGAAAATCAGTTCCAGATGCAGTCTGAGGTACAGGCTGATGGCCAGGCCGAGAGTCCGCCACAAGCGATTCAGATCGTGCCGCACATTCAGCCGCAAGTGCAccagcaactgcagctgcaGAAGCAGTCGCAGGACACCACCACGACCGTCACCTACGAGCAGATCTATGAGCAGCACATTGTCCAGCAAACAGTGAAGCAGTCCTCCAACAAGGTCCAGCTTATCTCCCTGCCGGAGGCGAGGCAGTGGCAGGCACAGcagcagcagcagcagcaacagctgcagTGGTCGTCGGTAGGCGGACTGGAGGCGGTGCGCAGTACACCCATGGAGAGTGTGATGGCAGCCACACCCACAACCACCACCTACTATATAAGCACCAGTGATCTTTATCCGCAGCAGCAGACTGAAACATATGCGATGCTGCAGCCCGCATCTCTGGACTCCAACGATAACTATATGgtggagcagcaacagcaccaccaccaccaccagcgcATTCAGTACCAGCGCCAGCACCCACAATCCCACCAGCAGGTccagcaacagcggcagcaacgCCAGCCCATCATGATACTCATACAGCCGCCGGATATTCAGCGTCCGGTGGCCTCCGCCAGTAATCCGCAACAGGCTCCGTTGCACATCTATGGTACTCCTGCGATTCGGAACGAGGTGCAGCATCTGCAACACATTCAGCGACAAAGAttgcagcagcatcagcagcagcaacatcatcatcagcagcagcagcagcaacagttgcagcaacagcgtcaccagcaactgcaacagcaactgccaCATAAGCAGCTACAGAGCCGACTGATACGAAGCCATCCGGTGGTTGGGATGCCGGGAGCAGCTTCCATCTCGACCAAAGTGACGCCCATGCCGGCCACCACGCCGGGCGGCCGGGCCCTGACACTGAAGTGCCGGTTCTGCCAGAACGGGCCGAGGTTCTCCAACAGCCTGGAATACAGTCGGCACATCATCGACCTGCATCCGGCCGTGGCGCCCTTCAACTGCCCGCACTGTCCGCTGGCATTCGCCGGACGGAATAAGCGGTCCCAGCACATACTCGACCACCATGTGGTGCAGCAGTACCAGTGCGGTCAGTGTTCGCAGGTGTTCCCCGCCCAGCGGGCCCTCGACGTCCACATTCAGCGGTTCCACATCTCTTCGAAGACCAGCCCGGCCGAGGGGGCTGGTGGGAACGGGAGTGAAGGGGGTGTCCGGGTGGAGGAGGTCCAGCTTCAAATAGCGAacgaacagcagcagcatcaggcacagcagttgcagcagcaacagctccagcagcagcagcgcgaGGAGCGAATGCAactgttgcagcaacagcagttgcagcaacaacagcaactgcagcagcaactggaGCAGCAGCTAGAGCACCaggaacagcaacaacagcaacagctgccGATGGTGCAGCAACCACAGTCGCCGCATCCTTCAACCATGGATGTGGCGGCGAGCACTACGACGCCACGGAAGATTCTGTGCTGCCCGGACTGTGAGGATTGCTCTTCTGGCCACAGCCACTTCGAGGAGCTGACAACTCTGCAAGCTCCACCCACTGTGCCCACCCCCCCGGCGACCATCGTGTCGGCCGCGTCGCCGCAACCCATGATGAGCATGCCGCACATAACGATGCCGTCGCCAGAGCAGTCGGAGCCCGATTCCACCACCACGTTGCGACAGTTTCGTAAGCGAGGCGTTATTGTGGGACCACATGGACCGCTGCACTTGGCCACGCCCGTGGCATCACCATCGGCATCGCCCTCGTCGTCGCCCTCGTCCTCCACCGTGGACGTGGTGGCACCCCCCGCCTCGCCGGCACCGCCCCAGTCGCCGGCCACGCCCAGCCCATTGCCGGCGAACGAGCTGCGGGCCAACCAGCAGTGTCAGTACTGCGAGGAGCGTTTCACCAACGAAATGACCCTGAAGAAGCACCACCAGCTAGCCCATGGCTCCACCACCACGATGCCGTTCGTGTGTGGCATCTGCAAGCGCGGCTACCGAATGCGTACGGCCCTCCACAGGCACATGGAGTCGCACGATGTCGAGGGCAGGCCGTACGAGTGCAATCTGTGCAAGGTGCGCTTCCCACGTCCCTCGCAGCTGACGCTGCACAAGATTACCGTCCACCTGCTAACCAAGCCGCACACCTGCGACGAGTGCGGCAAGCAATTTGGTACGGAGAGCGCCCTGAAGACGCACGTTAAGTTTCACGGTGAGCTCGGTTACCAGTGCGACGAATGCGATAAATCGTTTGAATATCTAAGAGAATTGCGAAAACACCGACGCACCCACACTAAGCTGTTTTACAAATGCGATATATGCCCCCGCGATTTCATGCACTTTCAGAGTTTTCGCGCTCACATGAACACCCATTTGCCGTTGGGCGTGTTTCTCAACGATGATGCCGCTGCCACAAAGTCCAACACCAATAGAGGAAAACAACTGACCACAATATGCGATAATCTGGAGAGTCCATCCACACCGATAGAGGAGCCCATCACACCGCTGACGCCGATGAGCAAcagtggcggtggtggcgctTACCACAACAGCACCACAGATGAATACCCGAACTCAGTCGAGAGCAGTGCTCTGGAGTCGATCGCCCCGACGCCATAA
Protein Sequence: MGAIVSAKKQINRDDGLPQEICRQCMAQFLMVAKFRRKCVRMQQRLQDFAQEVSDRQAARQAKRDQKQKQLEKEREKQRQRQRAEAGEATEARESREAETETESEVEQKVAQEAEEKPVSVPVTERKRRLVSESEGGTKYEIDNESEDLPPPKTRRLQLRLRKLRSVSTGSDVDQQTGAGSIDASSMPWKTKAARKEISELWSASPCTTEHSSPPPPSTGSDSEAPSTNSSDLSELSVGPCCGFASDHHPTSPSISSFGSGDTMSTGCLEFPRTVPVELMPRRGRRPRNAPIYTSAKRARRSFAKKSMAVGPSVAEENTKSDEVQDGLAMAVEKSSDLEDELPEMREEMPLLEEQAESKDSSEESSNPLPKTEDRDEDDTPVVQNGKEPVNIIPETRLSNLSESSTEIIPKTSPEDRTPETESGSSEEPLQSEELTSSTESAEKEPKSPEQPGIIVSIPLHALNEDLHRRLCTEPEAEEDSETRETATATPKSDDVNNNANGENFCQSATADSFNSAVALRTDDIEAATPDCEPEAGGHFRADGIQSVAETPPDKAEEEEVQTVRSGHTPMDFMAEFAKHCESGVEQLKATTPAPSPTPTALALPLHDLESKQQLEVEMNDVENTLNGILNEMQDQHMYTPTCSHIDEFLTPADYAPLTEQEPSVSPPNPNPFDQNMVATTPTKATQNQNVNPFDNSNFSNELIGFQNDIPCFENIASSPESDQSLHLELTQFLKELQPSKEDCKTEPQVEIREVESQAERVTDNHTEPLAQPPIPDQIQIESREDTQIESQSQMFVQTQVFAEQNSSENQFQMQSEVQADGQAESPPQAIQIVPHIQPQVHQQLQLQKQSQDTTTTVTYEQIYEQHIVQQTVKQSSNKVQLISLPEARQWQAQQQQQQQQLQWSSVGGLEAVRSTPMESVMAATPTTTTYYISTSDLYPQQQTETYAMLQPASLDSNDNYMVEQQQHHHHHQRIQYQRQHPQSHQQVQQQRQQRQPIMILIQPPDIQRPVASASNPQQAPLHIYGTPAIRNEVQHLQHIQRQRLQQHQQQQHHHQQQQQQQLQQQRHQQLQQQLPHKQLQSRLIRSHPVVGMPGAASISTKVTPMPATTPGGRALTLKCRFCQNGPRFSNSLEYSRHIIDLHPAVAPFNCPHCPLAFAGRNKRSQHILDHHVVQQYQCGQCSQVFPAQRALDVHIQRFHISSKTSPAEGAGGNGSEGGVRVEEVQLQIANEQQQHQAQQLQQQQLQQQQREERMQLLQQQQLQQQQQLQQQLEQQLEHQEQQQQQQLPMVQQPQSPHPSTMDVAASTTTPRKILCCPDCEDCSSGHSHFEELTTLQAPPTVPTPPATIVSAASPQPMMSMPHITMPSPEQSEPDSTTTLRQFRKRGVIVGPHGPLHLATPVASPSASPSSSPSSSTVDVVAPPASPAPPQSPATPSPLPANELRANQQCQYCEERFTNEMTLKKHHQLAHGSTTTMPFVCGICKRGYRMRTALHRHMESHDVEGRPYECNLCKVRFPRPSQLTLHKITVHLLTKPHTCDECGKQFGTESALKTHVKFHGELGYQCDECDKSFEYLRELRKHRRTHTKLFYKCDICPRDFMHFQSFRAHMNTHLPLGVFLNDDAAATKSNTNRGKQLTTICDNLESPSTPIEEPITPLTPMSNSGGGGAYHNSTTDEYPNSVESSALESIAPTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00550554; iTF_00477563;
90% Identity: -
80% Identity: -