Basic Information

Insect: Drosophila atripex
Gene Symbol: BCL11A
Assembly: GCA_035045925.1
Location: JAWNOP010000008.1:1961504-1974241[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.022 1.7 9.3 2.4 1 23 246 269 246 269 0.95

2 6 2.2e-06 0.00017 21.9 1.0 1 23 703 725 703 725 0.97

3 6 0.01 0.79 10.3 4.7 1 23 731 753 731 753 0.99

4 6 9.5e-07 7.3e-05 23.0 3.2 2 23 1013 1034 1012 1034 0.97

5 6 1.2e-05 0.00096 19.5 3.3 1 23 1040 1062 1040 1062 0.99

6 6 2.3e-05 0.0018 18.7 0.4 1 22 1070 1091 1070 1091 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.022	1.7	9.3	2.4	1	23	246	269	246	269	0.95
2	6	2.2e-06	0.00017	21.9	1.0	1	23	703	725	703	725	0.97
3	6	0.01	0.79	10.3	4.7	1	23	731	753	731	753	0.99
4	6	9.5e-07	7.3e-05	23.0	3.2	2	23	1013	1034	1012	1034	0.97
5	6	1.2e-05	0.00096	19.5	3.3	1	23	1040	1062	1040	1062	0.99
6	6	2.3e-05	0.0018	18.7	0.4	1	22	1070	1091	1070	1091	0.97

Sequence Information

Coding Sequence: ATGTACAACAAAATGCTGTCGATCAGTGAGGATCATGGATTCCGTTCGCTGAGCCATTCCGACTCGACGGAGAACGATGCCGTGGCCACGCAGGACATCCTCACTTGTGGCGCCTGCCAGAAGGCGTTCGCCCTCTCCGACATCGTCAAGTTCATCCAGCACAAGGTCCTGCAGTGCAACAAGGAGAACTACGGCCAGTGCGCCACCCAGAACCCTCAAATGGATCGCGACGCCGAGGAGGGGCGTCCACTGAGTCTCGTCAATCGCCGGCCCTCGATTTCCGCCCCCATTTCGGGTCGCAAgtcgtcctcctcTGGCTCAAGGATACACACACCACCACCCAGTCCGGCGGATTTGTTGGCGGACGGAGCCAGCAGCACGCCCAAACGGCTGGTAGATGAAAACGACAACACCACGCCCAAGGACATCGAGACAGCCGCCACCACACTGGACAAGGACACAGCCGCTCCCGGCAGTCCCCTGGCCAGCCAGAAGCAGCGCCGATCCTCCAGCCGCGACAGCAGTAGCGAGCTGGACCACGACCAAGACGCCGAACAGCCCGCCAAGGTCAAGGAGGAGCCGTTCGAGGACGAAACCACCGCCCCCCAAAATGCCgaccaggaggaggaggatgaacaggagcaggaggaggagcaggagcagtcGCTGGCAAAGCGACCGAAAATGGAGCTGGTCGATGCCGAGGCCAACACAGTGCACACAGAACCCAGCAACTACACCTGCTCCACGTGCAAGACCCGCTACACCTCCGCCTGGCGGCTCATCCAGCACGTCCAGCACTCGCACGGCGTCAAGATCTACGTGGAGAGCCCGGGATCCGTTGGGGGCGCCACCCTCACCGTGGCCACACCCGCCGCCCTCAACAGCAGCGCCCTGGCCCTGGCTGCGGCCGCGGCGGCAGCCTCTTCGGCGTCTGCCGTGTCCGGTTCCGGTTCCGGTTCCGgttccatttccgtttccggcaACCAACTCGCCAGCTCTCCGCCCCCGACGACGATCAGCCCCAGTCCGGCCGGGAAGCGGAGCAGCCCGCTGGCCGCCAATCTGTCCGCCAGCTCCTCCGTTTGCTCCTCCTCCAACTCCCTGGTGAACAGCAGCACCTCCAGCCTGGGCTccccgcagcagcagcagcagcagcagcagcaacagttgcagctgcaacagcaacagcagcagcagcagcaacagcagcgagtacagcagcagcagcgcgaGAGCCTGGCCACTGCCATGGCGGCTGGGATGCGGCACCATCCGCTCCTGCCGCCACCGGAGGCCATGCACCCAAATCCCTTCCAGCTGCTGAGAATGCCGCTGCCCCCGGCCCTGGCCCAGGCCGGAAACGTAGTTCCTACAGTGGGCCCACTGTTCGGACGGCCCGGGGACCACTACCGCATGGAGCAGCTGGTCAGCGAGCAGTTCCGCCACCACGGCTTCAACctggcggcagcggcggcggccgcCCAGGCGGCCCAGTTCAACGGCCAGGACGGCCGACCGCCCTCCtccagcagcagtggcagccaGCGCGGATCCGTCCCGCCGGCAGCCCTGCCCCCACCATCGCTCAgctcccagcagcagcagcagcagcagcaacagcaacaacagcagcagcaacaacagcagcaacagtcgcaacagcaacagtcgcagcaacagcagcagcaacagcaacagcaacagcagcaggggAACGGCAACAATCCGTTGAAATTGGAACCGCAGCAGATGGATTTTTACTCGCAGCGATTGCGTCAGCTTGCGGGCACAACAAGCCCTGGAGCTGGCAGCACTGTTAACTCGAGCTCGCCGAGTCCTCGACAGAAACAATCGCCGCACTTTGCGAGCCCATCCCcctcccagcagcagcagcatcagcagcagcagcatcagcagcagcagcaacaaggcCAGCAGCAGGCTCCTCTCCAAAGACCACACTCGCTGACGCCGCCCGAGAAGATGAGCGTTGAGAACTCGACCGAGAACGGCAATTTGGGACTGATCCTGGCCAGCACTCCGCGATCGGCCAGCACGCCGCCCTCGAAGACGGGGGAGATCAGCAGCTCGCAGGACAACTGCTTCGCCTGCGGCTACTGCGACAAGAAGTTCCGGTTCGAGAACAACCTGATCATCCACCAGAGGACCCACACCGGGGAGAAGCCGTACAAGTGCACCGCCTGCGACTTCGAGTGCTCCCACATCCAGAAGCTGATGAAGCACATGCGCGTCCACCGCTCCCCGCCCGCGGAGGACAACCAGGACGAGGGCAGCAACGCCGATTCGCTGGAGACCAACGAGGCCGATCACGACGAGGATCCCAATCCCGAGGACTCCGAGGAGGAGCTGAACGATGTCGACGGTGAGGCGGATCTTGacggcgaggaggaggacgacctCGACGAGATGGAGGAGTGCGAGGAGATGGACTACAAGGCCGAGGACCTCTCGGTGAGCAACCGGCTGGACGGCAAGAGCCAGAGTCCCAAGACCACCAGCTCCGGCGCCACCTCCCTGGTCGGCGAGCTGATGGACAAGTTCGGCCTCTCCAACATCGCCCAGTACAGCGAGGCCTACAAGCAGGCGCTCCAGGAGTCCGGGCGCAAGGAGGCAGCGgccgcagccgccgccgcagcagccgccgccgtGGACAACAACAACCGAGGTCCTGGCAGCGTGGCTGGCGGGGCGGCGGGTCCCGACAAGCTCAACGGCCTGCCGGTGGCCGCTCTCCGTTTACGCGACGAGTTCGCCAAGAACTGCAACATGttccagcagccgcaggacgGCGGCGCCCCCACCCAGGTGCCCCTCTTCAATCCATTCCCCAATCCCTTCGAGCTGACCAAGCGCATCAAGATGGACGGCGGCGACTGGTGGGGCATGTCCCAGGCCCTCCACCGCAACGAGGCGCTCTTCGAGAACCTGAAGCTGAAGCCTCTGGGTCTGGGCGGGGCCAACTCGCTGATCCAGGGTCCGCTGCTGAAGAAGGAGAGCCGGCAGCGGAACGACACCTGCGAGTTCTGCGGCAAGGTGTTCAAGAACTGCTCCAATCTCACCGTGCACCGGCGCAGCCACACCGGCGAGAAGCCGTACAAGTGCGAGCTCTGCTCCTACGCCTGCGCCCAGAGCTCCAAGCTGACCCGCCACATGAAGACCCACGGCCGGACCGGCAAGGACGTCTACCGCTGCCGCTTCTGCGACATGCCCTTCAGCGTCCCCTCCACCCTCGAGAAGCACATGCGCAAGTGCGTCGTCAACCAAGGCAAGGCCGCTGCGGCCGCCAATGCCGTGGCGGCTGCCCAAGCGGCCCAAGCGGCCGCCCAGCAACTCCAGGCGGCGGCCGCCGTCCAGGCCGCccaacagcaccagcaacagcaccagcaccagcagcaccaacagcagcagcagcaacaggcccAGGGTCAGGTAACCCAGTCGGGCCAGGCCCAGGGCCAGCAACTGTCGCCCCTCGGGGTCGTCGGCTACGCCCCCGCCTTCGTCGGCGGACACAACATCTCACTGCCGGGCAGTGTGAGCGGCGACAACGATTCGAATGCCTCCTCCAGCCTCACCGGCGTCCATCCCATCTCCCTCAAGGAGGAGGCATGA
Protein Sequence: MYNKMLSISEDHGFRSLSHSDSTENDAVATQDILTCGACQKAFALSDIVKFIQHKVLQCNKENYGQCATQNPQMDRDAEEGRPLSLVNRRPSISAPISGRKSSSSGSRIHTPPPSPADLLADGASSTPKRLVDENDNTTPKDIETAATTLDKDTAAPGSPLASQKQRRSSSRDSSSELDHDQDAEQPAKVKEEPFEDETTAPQNADQEEEDEQEQEEEQEQSLAKRPKMELVDAEANTVHTEPSNYTCSTCKTRYTSAWRLIQHVQHSHGVKIYVESPGSVGGATLTVATPAALNSSALALAAAAAAASSASAVSGSGSGSGSISVSGNQLASSPPPTTISPSPAGKRSSPLAANLSASSSVCSSSNSLVNSSTSSLGSPQQQQQQQQQQLQLQQQQQQQQQQQRVQQQQRESLATAMAAGMRHHPLLPPPEAMHPNPFQLLRMPLPPALAQAGNVVPTVGPLFGRPGDHYRMEQLVSEQFRHHGFNLAAAAAAAQAAQFNGQDGRPPSSSSSGSQRGSVPPAALPPPSLSSQQQQQQQQQQQQQQQQQQQQSQQQQSQQQQQQQQQQQQQGNGNNPLKLEPQQMDFYSQRLRQLAGTTSPGAGSTVNSSSPSPRQKQSPHFASPSPSQQQQHQQQQHQQQQQQGQQQAPLQRPHSLTPPEKMSVENSTENGNLGLILASTPRSASTPPSKTGEISSSQDNCFACGYCDKKFRFENNLIIHQRTHTGEKPYKCTACDFECSHIQKLMKHMRVHRSPPAEDNQDEGSNADSLETNEADHDEDPNPEDSEEELNDVDGEADLDGEEEDDLDEMEECEEMDYKAEDLSVSNRLDGKSQSPKTTSSGATSLVGELMDKFGLSNIAQYSEAYKQALQESGRKEAAAAAAAAAAAAVDNNNRGPGSVAGGAAGPDKLNGLPVAALRLRDEFAKNCNMFQQPQDGGAPTQVPLFNPFPNPFELTKRIKMDGGDWWGMSQALHRNEALFENLKLKPLGLGGANSLIQGPLLKKESRQRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRTGKDVYRCRFCDMPFSVPSTLEKHMRKCVVNQGKAAAAANAVAAAQAAQAAAQQLQAAAAVQAAQQHQQQHQHQQHQQQQQQQAQGQVTQSGQAQGQQLSPLGVVGYAPAFVGGHNISLPGSVSGDNDSNASSSLTGVHPISLKEEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00615125;
90% Identity: iTF_00550473;
80% Identity: -