Basic Information

Insect: Drosophila atripex
Gene Symbol: -
Assembly: GCA_035045925.1
Location: JAWNOP010000042.1:786424-791281[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0077 0.59 10.7 2.2 1 23 206 228 206 228 0.97

2 25 0.032 2.5 8.8 1.4 1 23 234 256 234 256 0.97

3 25 3.7 2.8e+02 2.3 2.0 2 23 290 311 289 311 0.95

4 25 0.015 1.1 9.8 0.8 1 23 384 407 384 407 0.93

5 25 0.76 59 4.4 1.3 1 23 448 470 448 470 0.96

6 25 0.99 77 4.1 0.1 3 23 480 500 478 500 0.92

7 25 0.025 2 9.1 2.2 1 23 577 600 577 600 0.97

8 25 0.031 2.4 8.8 1.1 1 22 609 630 609 630 0.96

9 25 0.46 36 5.1 5.5 1 23 639 661 639 662 0.94

10 25 0.0013 0.097 13.2 2.3 2 23 686 707 685 707 0.97

11 25 1.3e-06 0.0001 22.5 7.7 1 23 713 735 713 735 0.99

12 25 0.022 1.7 9.3 4.6 1 23 875 898 875 898 0.94

13 25 0.6 46 4.8 1.4 3 22 907 926 905 926 0.93

14 25 0.02 1.6 9.4 1.2 1 23 935 958 935 958 0.95

15 25 0.0023 0.18 12.4 3.2 2 23 979 1000 978 1000 0.95

16 25 0.00017 0.013 15.9 0.5 1 23 1007 1029 1007 1029 0.98

17 25 7.6 5.9e+02 1.3 0.1 2 21 1056 1075 1055 1076 0.91

18 25 0.0034 0.26 11.8 2.2 1 23 1122 1145 1122 1145 0.96

19 25 0.019 1.5 9.5 0.9 1 23 1182 1205 1182 1205 0.96

20 25 8.2e-05 0.0063 16.9 1.5 1 23 1232 1255 1232 1255 0.98

21 25 5e-06 0.00039 20.7 0.2 2 23 1278 1299 1277 1299 0.95

22 25 4.1e-05 0.0031 17.9 2.9 1 23 1305 1327 1305 1327 0.99

23 25 2e-06 0.00015 22.0 2.0 1 23 1333 1355 1333 1355 0.97

24 25 1.8e-07 1.4e-05 25.3 2.4 1 23 1361 1383 1361 1383 0.99

25 25 0.0098 0.76 10.4 0.2 1 23 1389 1411 1389 1411 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0077	0.59	10.7	2.2	1	23	206	228	206	228	0.97
2	25	0.032	2.5	8.8	1.4	1	23	234	256	234	256	0.97
3	25	3.7	2.8e+02	2.3	2.0	2	23	290	311	289	311	0.95
4	25	0.015	1.1	9.8	0.8	1	23	384	407	384	407	0.93
5	25	0.76	59	4.4	1.3	1	23	448	470	448	470	0.96
6	25	0.99	77	4.1	0.1	3	23	480	500	478	500	0.92
7	25	0.025	2	9.1	2.2	1	23	577	600	577	600	0.97
8	25	0.031	2.4	8.8	1.1	1	22	609	630	609	630	0.96
9	25	0.46	36	5.1	5.5	1	23	639	661	639	662	0.94
10	25	0.0013	0.097	13.2	2.3	2	23	686	707	685	707	0.97
11	25	1.3e-06	0.0001	22.5	7.7	1	23	713	735	713	735	0.99
12	25	0.022	1.7	9.3	4.6	1	23	875	898	875	898	0.94
13	25	0.6	46	4.8	1.4	3	22	907	926	905	926	0.93
14	25	0.02	1.6	9.4	1.2	1	23	935	958	935	958	0.95
15	25	0.0023	0.18	12.4	3.2	2	23	979	1000	978	1000	0.95
16	25	0.00017	0.013	15.9	0.5	1	23	1007	1029	1007	1029	0.98
17	25	7.6	5.9e+02	1.3	0.1	2	21	1056	1075	1055	1076	0.91
18	25	0.0034	0.26	11.8	2.2	1	23	1122	1145	1122	1145	0.96
19	25	0.019	1.5	9.5	0.9	1	23	1182	1205	1182	1205	0.96
20	25	8.2e-05	0.0063	16.9	1.5	1	23	1232	1255	1232	1255	0.98
21	25	5e-06	0.00039	20.7	0.2	2	23	1278	1299	1277	1299	0.95
22	25	4.1e-05	0.0031	17.9	2.9	1	23	1305	1327	1305	1327	0.99
23	25	2e-06	0.00015	22.0	2.0	1	23	1333	1355	1333	1355	0.97
24	25	1.8e-07	1.4e-05	25.3	2.4	1	23	1361	1383	1361	1383	0.99
25	25	0.0098	0.76	10.4	0.2	1	23	1389	1411	1389	1411	0.97

Sequence Information

Coding Sequence: ATGCTACCACCAAACACTTGCCGAACTTGCGCTCTGCAAAACCCCGACTTGCAGCCGCTGTCTGCTTGCTTGGAAAAAGACGCCAATAAGAGTTTCTACGAAGTGCTCCACGAGCTAACGCAAATCGATCCCCTCCAGGAAGGCTTGGACTCCAACCTACCTCAGCATTTGTGCAACGAATGCTTGAACAGATTGGAGAATGCCTACTCTTTTGTGCAGCAGGCCAGAAAAGTTAACGGAGAACTCTTGGTTCGGTTGAGGGAATGTCTTGATGAAACGCCCATAGACATACCCcaggaacaaaaaataaaaacggaaCTTGCAGCTGATCCTGAAGCAGGAAATGAGGATAAGGAAGCCTTGGACATTCCAACAGTGGAATGCAAGTGGGATGCGGACAGTGACACGGATATGAGGGAAAATCCAGTCACTGCCAGCGATACggaGGAAGTCGATGAAAAGCCGTATCAACTACGGAGGAGTGCCCGGAAAGTCAGGCAACCAACAGAAAGTGAAAATGAGGACGTTAACATCAGCGAGAAATCGCCGGTAAAACGCCGACGGGGTCGACCTCCTGGCAAGGCCAAGAGCCAATCGTTGACCGCCGATGGTCGGTATGCCTGCCATGCGTGCGGAAAGAGTTTCTCCTGGTACCGTGACATGCAGCGCCATTCGCGGAGCCATTTCGATAAGAACAGCTTCGTGTGTAGAACATGTGGGAAGGGATTTCTGCGAAAGGACAATTACGTGTTTCATCTTCGCAGCCACGACAAAAAAGTGGCTAAACAGGAGTCGGACTCCTTGAAGCTGGGCAGCGAGTGGCTCTTTGCCGAGCGCTTATACTCCTCCAGCAACCTTAAAAAAATCGAGTGCAAGCTATGCAACGATAAGTTTGAACGAATCAAGGATCTCAGATGTCATTTGGACACTCACATAAGCACAGACAGTCTTCACGCCTTATTGCCGGAGAGCGACGTGGTTCGAGAGCATTACCAAACACTGTCTGGCGACTTGGAGGGCGTCAAGCAAATGATCATAGCAGATATAGCCAAGGGAATTCTGGAGAAGTTCGCATCGGTAGTCAATTTCCATGGCTATGAACTGGACATCAATGACTCCGATGAGGAAAGCCCTCTAGGGGATGGCAAATACGTTTGCGACATGTGCAATGTGGGATTTTCGCGCAAGCACCGTATAGTGAGGCACACCCTGGAGGAGCACGCCCAGACATCGACAGAGGAGCTTCCTTGGCAACGTTGCAGTTTCTGCAAAATCAGTTTTCTGTGCTCCACCGTCTACAATCAGCATTTGCAGTACCAGTGCCACAACAGGCTGAAGAAGTATAACTGTCGAAAGTGTCCTGGAAAATTTATGTGGCTGGACAATCTGGAAAGGCACGCTTGCTCTCATCGGACGAACCTGGAACGTCAGATCTTCTGTACTTTGTGCGACGCTCAAATACCCACTCTATCGAAGCTACGCATCCACCTCGTTGGCCAccaaaaagatttaaaagatTTCAATCCTGACCTCCAGTCCATGTTTTTTAAATCCTTCTATCCCAGGGGCTTGGAATGCACTCCCGCAGAACTGGGTGCTCGTATTATTGAGGACTTTGAAGTCCAAGATTTTGACCGCTATTACAACGCTGCTACCTCCAGTGGGCGCGAGTTGGATATCTTCGATTCAGAAACTGAGGAATCGGAAGCAGATGACGAATCACCGCATCATACATGCGTTCTTTGCGGAAAAATGTCAAAGAGGCTACAGGTCCTACTTCAACACCAGAAAAGTTTTCATTCTGAGAAATTAGGGGCCTTGCCCTTCTCTTGTGAAGACTGTGAAGAAGGATTTGTTTGCAACACACTACTTCAAAGGCATCGCCGGCGATGCAGTTCAAAAAGGGGTTCAAAGTTCCATTGCCCAGACtgcaatcaacattttttgtggCAGAGCAACTACGAGCGGCACTTAAAAGCGCACCATGACCAGGAGACGAGTCCGGAGACGGAAGAAAGTCGTTCATCGAGACCATGCTCCTCGGCATCCAAGCTGCAGTGTGATGAGTGCGAAAAgACTTTTATTTGGCACAAGGACCTTACCCGCCATAAGCGGATGCATCAGGCGGATGTGAAGTATAAGTGCACCCACTGCGATCGCAAGTTCCACCGCAAGGATAATCTGAAGTCTCATATGCGGGTGCATTCGACAGAGCAACAATTGGATCAATCGGCAGAGCACGCATTGAATGATGCAGATACTGCTTCTTCCATTTTGGCCCATCTATGTCGCCCACATGGCTGCAAGCAGATCCAATGCATGATCTGCCTCTCCCGTCACTCCAAAATTTCAGATCTTCGGACACACCTCGCCTCTCACAAGTACTCAGTGACCTTCTCCGACTATCGAGATATTACCAGCGCCTCAAAGTCTATGTACCCAGAATTGCCGGCCCCTTTAGACAGGCCCCAATTGGCAGAAAGAATAATGGCTGATGTTGATAAAGGATGCAACCTGGACAGATTTGTTTCCATCGCCAACGAAGCAGGCTTGGAGCTGACTCTAGATAGCAGCGAGACTGATACTGAGTCGGACCAAGAAGAGAATCATTCCACTCGTACTTATACCTGTCATATTTGTGGAATGCAGGTACATCGAAAATACCAGCTGTATGCCCACCACTTGGCGAGGCACAAGGGAGAAGAGAGTACTCTCTTTTGCTCACATTGCCAGGCAAGGTTCCTTGATAAGGCTCTGCTAGAACACCACTCCCGAACTCTTTGCCGAAACTCCCAGAAACGGTTCCAGTGCCGCAAGTGTCCGCTTCGATTTCGTTGGCGGGAGAACTTAAAATTACACAGCAACGTGAGCCACCAGCAGGATGAGACTCCAGCTGAAGGAAAAGCAGTTTCTCCCCAAGGCGACGGCGATCTGCACTGTGGACAATGCCAGCGAAGCTTTAAGATGCAGAAGGATCTTACGCGGCACAATTTGATGCATAACCAGGAATCGAATATATATCGGTGTCGGTGGTGTGCCCGCCGCTTCTACCGTTGGGCTAATCTCCTTCAGCATATAGTCCGCCACGGGATCCGGGCCAACCAACTGCCCTATGCTGAGGCTCTTCTAGACTCATATGGACATCCCGGAGGTAACAAAATCATCGAATGCCGCGTTTGCTGTGTGAGTTTCCCTACAATTGCTGCCCTGCGTCTGCATCTTGAAACCAGCCCGGTGGGCAGTCACCATGAGCTCCTGTCGCTCCAAAACTACTCTATAACAAATCAGATGGGCTACGAACTAACACTGGAGGATTCTGATACAGATGACGAGGGCTGTAAACCACCAGGAGCTCCGGCCTTTTATACGTGCGGCATGTGCCAACTGCGGTGTGTTCGGAAATTCGAGCTTCAACAACATCAGCAGGCCATGCACCGAATAGAGAAGATTGCGGACGGCTGCGACAAGTGCATCTTCAAGAGTGTGTGCCCAGAACTGATTGCCCATCATGTGAGGACGCAGTGTGGCAACCAGCAAAAACATTTCACCTGCACGCGATGCGGTTTTAAGTTTATGTGGGAATCCAATCTGTTGCTTcacatgcaactgcaacacgaCAAAAAAGAAGATTTAGGGCAGGATCCTGCCATCCCGGAATCGCCTGATGAACCGTACAAAGCTACATGTCAAATCTTTCAATGTGGTCTCTGTCCCCGAAAGTATAACCGCAAGGACCGACTGACGGCGCACATTAAAAAGTTTCATGGGCCCAATGTGGAGAAGACACCCATCCGGCCACCGATCTCAGAGCCCAAGGAGCCAAAACGATTTTTATGCGCATTTTGTGGCAAGGCCGTTAGCTCGTCCTCAAACCTAATCATCCATATGAGGCGCCATACCGGTGAGAAGCCCTTCAAGTGCGACTATTGCGATATGGCTTTCCCTCGATCCTCAGATCTCCAGTGCCATCGAAGGACGCATACTGGGGAGAGGCCGCACGTGTGCACAGTATGCCAGAAAGGATTCGCCCGATCTTACAAACTGCAGCAGCATATGCGTATCCACAGCGGCGAGAGGCCCTATAAGTGCACCTACTGCGAGAAGAGCTTTACGCAGTCCAACGACTTGACCCTTCACATCCGGCGGCACACAGGTGAACGCCCCTACCAGTGCGGCGTCTGTGGGGATCGCTTTATCCAGGGTACCGCTTTAAAAAATCATCGCCTCCAACACGGCCACCATGAGAATAGTGCCACTGCCCAGGGCTCCGTACCAGGAGAAACAGCAAGGCATACGGTCCTAGAAAAGTTTGCTGCTTAA
Protein Sequence: MLPPNTCRTCALQNPDLQPLSACLEKDANKSFYEVLHELTQIDPLQEGLDSNLPQHLCNECLNRLENAYSFVQQARKVNGELLVRLRECLDETPIDIPQEQKIKTELAADPEAGNEDKEALDIPTVECKWDADSDTDMRENPVTASDTEEVDEKPYQLRRSARKVRQPTESENEDVNISEKSPVKRRRGRPPGKAKSQSLTADGRYACHACGKSFSWYRDMQRHSRSHFDKNSFVCRTCGKGFLRKDNYVFHLRSHDKKVAKQESDSLKLGSEWLFAERLYSSSNLKKIECKLCNDKFERIKDLRCHLDTHISTDSLHALLPESDVVREHYQTLSGDLEGVKQMIIADIAKGILEKFASVVNFHGYELDINDSDEESPLGDGKYVCDMCNVGFSRKHRIVRHTLEEHAQTSTEELPWQRCSFCKISFLCSTVYNQHLQYQCHNRLKKYNCRKCPGKFMWLDNLERHACSHRTNLERQIFCTLCDAQIPTLSKLRIHLVGHQKDLKDFNPDLQSMFFKSFYPRGLECTPAELGARIIEDFEVQDFDRYYNAATSSGRELDIFDSETEESEADDESPHHTCVLCGKMSKRLQVLLQHQKSFHSEKLGALPFSCEDCEEGFVCNTLLQRHRRRCSSKRGSKFHCPDCNQHFLWQSNYERHLKAHHDQETSPETEESRSSRPCSSASKLQCDECEKTFIWHKDLTRHKRMHQADVKYKCTHCDRKFHRKDNLKSHMRVHSTEQQLDQSAEHALNDADTASSILAHLCRPHGCKQIQCMICLSRHSKISDLRTHLASHKYSVTFSDYRDITSASKSMYPELPAPLDRPQLAERIMADVDKGCNLDRFVSIANEAGLELTLDSSETDTESDQEENHSTRTYTCHICGMQVHRKYQLYAHHLARHKGEESTLFCSHCQARFLDKALLEHHSRTLCRNSQKRFQCRKCPLRFRWRENLKLHSNVSHQQDETPAEGKAVSPQGDGDLHCGQCQRSFKMQKDLTRHNLMHNQESNIYRCRWCARRFYRWANLLQHIVRHGIRANQLPYAEALLDSYGHPGGNKIIECRVCCVSFPTIAALRLHLETSPVGSHHELLSLQNYSITNQMGYELTLEDSDTDDEGCKPPGAPAFYTCGMCQLRCVRKFELQQHQQAMHRIEKIADGCDKCIFKSVCPELIAHHVRTQCGNQQKHFTCTRCGFKFMWESNLLLHMQLQHDKKEDLGQDPAIPESPDEPYKATCQIFQCGLCPRKYNRKDRLTAHIKKFHGPNVEKTPIRPPISEPKEPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHSGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGVCGDRFIQGTALKNHRLQHGHHENSATAQGSVPGETARHTVLEKFAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00550383;
90% Identity: iTF_00477468;
80% Identity: -