Datr003180.1
Basic Information
- Insect
- Drosophila atripex
- Gene Symbol
- ttk_1
- Assembly
- GCA_035045925.1
- Location
- JAWNOP010000012.1:14948140-14951636[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-19 9.1e-16 57.3 0.0 2 45 566 610 565 610 0.97
Sequence Information
- Coding Sequence
- ATGTCCGTGCAGCAGTTCTGCCTGCGCTGGAACAACCACCAGCCCAACTTCATCTCGGTCTGCTCGTCGCTACTGCACAATGGTACTCTGGTGGACGTTACCCTGGCAGCCGAGGGACGCCAGCTGCAGGCGCACAAGATCGTTCTATCCGCCTGCAGTTCGTACTTTCAGGCACTGTTCACGACAAATCCGTGCCAACATCCCATCGTCATACTAAAGGACGTGCAATACGATGACCTCAAGACCATGGTTGACTTCATGTACTACGGCGAGGTGAATGTGTCGCAGGAACAGCTGCCGCACATCCTCAAGACCGCCGAGATGCTCAAAATCAAGGGCCTGGCGGAGATGCCAACGGACCCGGCCAATCTCACCAAGTCCGACAGCAAGTCCTCCAGCGATGGCACAGAGCTGGTGGGCGGCGGGTCGGGAGTGGGCGCTGGGCCGGGTACCTCGGCGGGCAGCTTGGGTGCTGCGAGCGGTAGCAGTGTGGGGGACTCGCTGTGGAGCAGTAGCGAAGCGCAGCagttccagcagcagcagcaacaacagcagcaggcccaacaacagcagcaacagcaacaccatcaccaccagcaacaacaacagctccagcagcagcagcaacaacaggcgcagcagcagcagcaacagcagcaccatcaccaccaccagcaacaggCACAGACGACGCaagcccaccaccaccagatgAGGCGGACACCCTCGCCCCTGAGTGCTGGCACCTCGCCAGCCACGCGGCGTAAGCGATTGCGGAAATCCTCGAATAACGGCTCTGGCGAACGGAACAATGTGGCGGAGGAGCACAACAGCTCGTTGGAGGCTGGCGCCGGGAACACGGGCCTAAGTCTCGCCCAGATGAGTCAGATGTCGTTTGGGGCTGGCGGCGGCCTGGCCGGGCACTCACTGCACGCCGCTAAGCTGCTGAAGGAGTCGGCGGCCGCCGAACTGGAACAACAGCCGCAGGACTCTGACCTGGACGACGGACACGGACACATTCACATGCAAATTAAGCCCGAGGTGGACATTGGAGGAGTCAACCAAGCGATGCCCCTGGACATCTCTGGAGCCACAACCCCATCGGAGCACGACGCGCCAATCTCTCAGTCCTCGCACTCGGGTCTGCAATGGACGGTTGTCGATTCCAACTATCCGCGCTTTTCCTTGCCCGCCTGCCAGTCCAATCTTCTAGGCaatggtggcggtggcggcggctcCGGCAGCCAGAGCAGTGGGGCAAATAGCGCGAATAGCGATCAGCGTCAGCAGCAGCACGAAGCCCAGCAACAGGCGGCAgccaaccagcagcagcagcaacagcacctgCAGCAACTGCactaccagcagcagcagcagcagcaacaacaacagcagcagcaggagcaggccTCCGCCTCGGCCACCGCCGGACAGGCGTACTCCTCGCAAATCATCACAGTGAACAACTTGGTCAGCGGCTATGCGACGGCGGCGCAGAACCTCTCGCCCACATCTCCCAACGAATCCAATATGGTGCAATCGGTCTACAGCCAGGGTCCCACGCCCACCCAATCGCCCGTGCACGCGGGCactggcggcggcagcggaggAACCGGCAATGCCACAGGAAACGGCGGCACAGCCGGAGCGGCCAGCCAGGTGGTGAAGCGAAAGCGTTCGGTGAACCCCCAGGGCGATGAGAACTTCATCCGAGCCCTGGAAGCAGTGCGCACGGGAGGAATAGGCTTTTGCAAGGCGGCACGCTTGTACGGAGTGAACAACCGCACCCTGTGGCTGGAGTACAAGAAGAGGGGCTATCCCGTTTCGCGGCCGAGCATCAAGGCACGCGTGGTCAAGCAGGAGCCGAACCTGTCGCCATCGCCCACACCCTCCACGAACCCGGGCGACGACAACACCAACGAGACGCTCAGCATGCAGATTCCACCCCAAGCGGAGACACCGACGCCCTCGCTGATGTGCACGCCGCATCACACGGGCATCGGAAGTGCGGCTGGCAGTCTGCCGGGCAGCGGAAACTCCCACCCGGCCATCGGTGTGATGAGCCTGTTCGACCCGCGGTACATGGACTCGCCCGGCAATGTGCACTCGATGACGCGGCAGCGGTACATCGACAGCGGAGCAGGGGCTGGGGCGGGGGGTGCGGCCACTGGAGCGGGAACCGGCACCATCAATGTGAACCCTAGCACCGCCATGAATCTGCAGAGTATTAACTTCAACTCGATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSSDGTELVGGGSGVGAGPGTSAGSLGAASGSSVGDSLWSSSEAQQFQQQQQQQQQAQQQQQQQHHHHQQQQQLQQQQQQQAQQQQQQQHHHHHQQQAQTTQAHHHQMRRTPSPLSAGTSPATRRKRLRKSSNNGSGERNNVAEEHNSSLEAGAGNTGLSLAQMSQMSFGAGGGLAGHSLHAAKLLKESAAAELEQQPQDSDLDDGHGHIHMQIKPEVDIGGVNQAMPLDISGATTPSEHDAPISQSSHSGLQWTVVDSNYPRFSLPACQSNLLGNGGGGGGSGSQSSGANSANSDQRQQQHEAQQQAAANQQQQQQHLQQLHYQQQQQQQQQQQQQEQASASATAGQAYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHAGTGGGSGGTGNATGNGGTAGAASQVVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDNTNETLSMQIPPQAETPTPSLMCTPHHTGIGSAAGSLPGSGNSHPAIGVMSLFDPRYMDSPGNVHSMTRQRYIDSGAGAGAGGAATGAGTGTINVNPSTAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00477402;
- 90% Identity
- iTF_00481609; iTF_00614829; iTF_00550318; iTF_00550179; iTF_00546035; iTF_00545889; iTF_00477402; iTF_00477264;
- 80% Identity
- iTF_00481609;