Basic Information

Insect: Drosophila athabasca
Gene Symbol: jing
Assembly: GCA_008121215.1
Location: VMQQ01000020.1:201565-211804[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00067 0.045 14.0 2.0 1 23 759 781 759 781 0.98

2 8 0.00016 0.011 15.9 1.4 1 23 813 835 813 835 0.97

3 8 0.16 11 6.5 0.4 1 19 843 860 843 866 0.81

4 8 0.00024 0.016 15.4 0.1 3 23 873 894 872 894 0.96

5 8 0.00022 0.015 15.5 3.5 1 23 900 922 900 922 0.97

6 8 0.014 0.98 9.8 0.2 1 23 929 952 929 952 0.95

7 8 0.00028 0.019 15.2 2.2 2 20 959 977 958 980 0.91

8 8 0.033 2.2 8.6 8.0 1 23 986 1009 986 1009 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00067	0.045	14.0	2.0	1	23	759	781	759	781	0.98
2	8	0.00016	0.011	15.9	1.4	1	23	813	835	813	835	0.97
3	8	0.16	11	6.5	0.4	1	19	843	860	843	866	0.81
4	8	0.00024	0.016	15.4	0.1	3	23	873	894	872	894	0.96
5	8	0.00022	0.015	15.5	3.5	1	23	900	922	900	922	0.97
6	8	0.014	0.98	9.8	0.2	1	23	929	952	929	952	0.95
7	8	0.00028	0.019	15.2	2.2	2	20	959	977	958	980	0.91
8	8	0.033	2.2	8.6	8.0	1	23	986	1009	986	1009	0.96

Sequence Information

Coding Sequence: atggatAACAAAACTAAACAGTTGGATTTTAAATTACTGGTGGATCAGTCTCTAAATCTACTGGACAGCCTCAATACGGCATTGCGGTGCGATGCTATACAATTTTTGCTGCAGACGCTCAAGTGCAAATATCCGGACGCCTGCGACCAAGTCGTCAGGAATCTATTCAGTCACATAACCAATGATAATGGCGGAGGGCTGGCCGTGCACCACGAGCTAGCGAAGAGCGAACAGCtccaggagctgctgctggtcacCAAGAAGGAGAAAAAGGAGAAGCAGGAGCCGGGAGACGGTGGAGACGGGACCGATGCAGAGATCAAGCGGGAGCATCATGTGGGAGAAGATGAGGAAGAGGAGGCGGGTTCTACAGATCTGAATCAGAATTTTGAGAAAATCCTCTGCAAAGAGGAGTTTCTGGGCctcgacgacgaggaggaggaattCCTCCATGATGCGGACACTGAGAATTCGTCTTCCGTGCAATTCCACGCTGGCAACCATGTGGATGCACTCGGGCCTGGTGATCCTTTGGATCTGATACAAGGCGGTGGCTCACTACTGGTCAAACGGAAGTACGAGGCAACTTTCGGAGCCGACGAGAATGAGGAGGATCACCTGGATGAGGATGCAGCCAACAGCAGCCCGAACGtcaacagcagcgacagcaaacTGGTCAAGCGAATGCGAACGAACAACATGCACATGGCTGTGGCGgtgggagtgggggtgggggtgtcgAGTGTGAGGAGGAAAGAGGAGGAGAGATCCAGCCTAGGCGAGGGCTACGTCTTCCACGAGGACAGCCAGTATACGCTGCGATATCACCACAGTACCGGGGAGTTCAGTGAGCGGGCTTTTAAGGCTCAGTTCCGTGCTCTGTTGCGCCTGGCGCTTAGTCAGCACCACAAGCCCTTCCTCAAGCAGTTCTACGAGAACTTTGTGGAGAATGGACGTCTGCTGGGTACCACGCCCTCGACGAGAGTATTGAAGGAGCTCCGGGATCAGCGATTGGATGAGTGGCGGAGGCAACGGGAGCATCGCCAACTGGTCAGCCTACAGAAGCAAAATGAGATTCAGCAGCAGGAAATTCAAAAGCAGCAAGAGATTCAGacgcaacagcagctgcacgACGATGAGCACCTGCAACAGGATCTGGAGCAAGAGCCGGAGCgtgagcaggagcaggagctgccCCAACAGCTGCCTGCCATCTCATTCGGCGACTCGGAGCTAGAATCAGAAACGGAATCACAGCTGTCGTCGGCAGCTCAAGAGATTATGAAGTTTGAAGAGTTCATTGACGACGGTGTAGGCGCAGGACGTCTAATCGATGGTCTGGAAATGGAGCCGGAGATAGATGACATGCTTGCTGGCGCTGGCAGTGCACTGTGCAGCGTAAACAGTGcgagcggcaacagcagcaacagcagcagcagtgggagtggtaatgggaatggaatcggaatcgaaaTAAGCGGGGTTGTCCTGGAGAACAATAGTCATCATTCGCATCACCTaagtagcagcagcagtgcaaaTCTTGTGATCAACGGCCTTACGTCAAGCAATAGcataaacagcaacaacaacaacaataacaataatggCAGTCTCCACTGCCAGTCAATGTCCCTCcacgggcaggggcagggacagggtcTGGGACCGGTACAGGAGCAAGTAGCATCAGGCAAGCCATCGCTTCATCTGCCCATGGCCATGAGCTTGGAGAGCAGAGACCTGAAAAGCAGCAGTCAGCAGGGACATATAATCATGTCGGGAGGAGGAAGCTCTGGGGTCCACACCAATGAAATTCAGCAGCTGCATCAGCACCCAAATCACTACAACTCGAGCAATAATCCCCTCTCCATGATGGGCGGaatgatgcagcagcagcacgttaacatgcagcatcagcaacagcagcagcagatgatgCAGGGACAGTTCCCACAGCATGGCAGCATGATGAACAATCGTCAGATGCCTGCTCTTGTTGCCTTGTCGAATCTGGGAGACGAATCTCCGGTCTCTAGCAATGTCTGTGGCCAGATGAACTCGTCGCTAGAGCTGGACGACAATGATCTGTCGCCCGACGAGGATGACGATGAGCTGGACACCGAGCTGGATGAACTGGATGCAGCCAAGCAGCAGCTGATCgatggcggcagcagcagcagtacctCGCTGCAGGCGCCGCCTTCTCAGCATGGCAGCGGAAGTGGCGGCAGTGGGGGACACACGCCCGGTAGCAAAAAGGATAAGCCCATCTACAATTGCCTGTTGTGCCCGAAGTCCTATCGCAAGCGAAAATCTCTGCTGGATCACTACAAAATGCATCCGGGCTTCTGTCACGATTGCGGCCAACCCAATGGCAACACGTTGGAGGAAATAATCCATCACAATCGGACGATGCACGTAAAAGAGTTTCCGTTCGTGTGCGAGACCTGCGGCGAGTCGTACTCGCGGAAGCAGCAGTTTCATGCCCATGTCGATTCGCACAGCAAGAAGGATTTCAAAACCTTTCCGTGCGGCGAGTGCGGGCTAAAGTTTCCGCAGaagaagctgcagcagcatttCGAGGAGACTGGCCACAAGGCGGACGGAGCCATCTGCGAGGTGTGCGGCGAGGAGTTTACATCAAAGAATGCCCTCTACCAGCACATAATAAGAGTGCACAAGCGAGACAACTTCTTCGAGTGCCACATTTGCCATAATCGCTTCACGTTGAAGGCCAATCTGGAGCGGCATGTGCAGCTGCACACCGAGGTGAAGCGCACTTATGTGTGCGACCTGTGCGGCTCATCTTACTATACATATCCCGCACTCAAAGAGCACTACAGCAACGCGCATGTGGATGTGTCCGAGTGCAAGTGCACGCTGTGTGGCAAGCGCTTCGGGTCGGCCAAGTCGCTGCAAAGGCATCTGCCCTCCCACTCGGAGGAGCGACCGCATTGCTGTAACTACTGCGATCAGACCTTCAAATGGAAGACGCATTTAGTGCGTCACAAGCAGACGGCGCATGGAAATCAAACGCCGCCGCCTAAGAAGGGAAAGCAGCGCTTCCCCAAAGCGAACGAAGAAGCTGAAATGGCTGCTCTGCCGGATATGCCAGGTCCGCCGCCTGTGAAGGCCAGCAAAAAGTCAACAGCCGGCAAGGCAAAGTCACAGGCTGCAACAGGCACGGCGGGGGCTTCcttacagcaacagcagaagggAGCTGCAGCGACGCCCACGCCACCACCCCCAGTCTCAACGACCCCGGGATGTCTGCAGCAGGATCAATTCAATGCGGCGATggtcagcagcaacagttcgCAGTCCTCGACGGCATCCACATCGCAGCACTCGGTGTCTACGAGTGAATCTCAGCAGAATTCCATCTACAATCAGAGCTTTAATGCTGAGAAACTGCCGCCAGGCCAACAAGCACCGccgccgcaacagcagcagcagccaccacctCCACCAAATGCTTTGCATCAGCAACATCCAACGCCACCtccaacacaacaacaacaacaacagcaaccgcGTGCCAGCCCGGCTGACATGCACCTGCAGCGAATGAATAGCTTCGGGCAGGAGGGGCAGTTCCACTTTGAGGCTGGCCAAGCGGCCGGAAGCTATCAGCAGCACCAGCTGATCAGTCaatatcagcagcagcagcacctgaGGAGTCACACTCCTCAGAGCCCTCATTCTGCACATCCTCCCCATCCTTCGCATCCATCGcagatccagcagcagcagcaaccgcagcACTTTACTTCTCCTCACCATATGCCACCAatgcaccaccagcaccagctgatgatgcagcagcagcagcagcaccgtcATAGCCAGCGATCACCATTGCACCACCATCCCTCAacgcagcagctgcagcagcagcaccaacagccgTCGCATTCCCCTCAGCATGCGAGACTGCAGTCGCCGCAACCTCCGCcagtacaacaacaacaacaacaacaacagcagcagcaacaacaacaacaattccTGCAACAACAGGCCGCAGATTCTTGGGGCAACATGAACTTTGGCAATCCCCCCAACAACCAGCAGGAGCTGAAGGATAACAAATTCTATATCGTAGATTCGGCCGAGTTTCTAGGGCTTCCAATGAATGTGCCGCCTGCccaacagcagccaccacaGCCTGTGAGcaaaccgcagcagcagcagcagccgccgccgccgcaacaacaacagcagccccAACAAGATCCAGCTCTAGCTGGTGATCTGATGAGCTTCCAGCACATGTGGCCAGCGCCAGGTTTCAGTCAGagcccacagcagcagcagccccaacagcaacaaccgcAGGGACAGGCCAATCCGGGAGATCCTCACAATTACAACAACATCGGCAGCATACTCACGAATCTCATTGATAGCCCCGCGACTATGGAGTACAACTTCGACTTGatccagcatcagcagcagccgacggcccagcagcaacagcaacaagcggcgcaacagcaacatcacaATGCAGGAGGCTATCCGGGAGCCTTGATGAGAAGTGGCGCCGTGTACGGGGGAGCCTACGAGCAGCACATGAGCGACCAGTTGGTCAGTGaccaacagaaacaaaacagCTTTCAGCCCTATCATTTGCATGGCCAGCAGGCACAACAACAGCCGCCGTTGCACCCCCACTTACTGCCTCCGGCGGCAACGCATGGGAACGTTTACGAGCGGACAGCAGTCggggtgggcgttggcgtagGCTATTCTATGCTAGGTGACGAGTCAAAGGCCGTGCTGCCTCCGATGATGGGCGGAATGATGCAGCAAATGCCACCTCACGGACAGCAGCCAGATCTAATCTACTATCCAGTGAAAAACGATTGA
Protein Sequence: MDNKTKQLDFKLLVDQSLNLLDSLNTALRCDAIQFLLQTLKCKYPDACDQVVRNLFSHITNDNGGGLAVHHELAKSEQLQELLLVTKKEKKEKQEPGDGGDGTDAEIKREHHVGEDEEEEAGSTDLNQNFEKILCKEEFLGLDDEEEEFLHDADTENSSSVQFHAGNHVDALGPGDPLDLIQGGGSLLVKRKYEATFGADENEEDHLDEDAANSSPNVNSSDSKLVKRMRTNNMHMAVAVGVGVGVSSVRRKEEERSSLGEGYVFHEDSQYTLRYHHSTGEFSERAFKAQFRALLRLALSQHHKPFLKQFYENFVENGRLLGTTPSTRVLKELRDQRLDEWRRQREHRQLVSLQKQNEIQQQEIQKQQEIQTQQQLHDDEHLQQDLEQEPEREQEQELPQQLPAISFGDSELESETESQLSSAAQEIMKFEEFIDDGVGAGRLIDGLEMEPEIDDMLAGAGSALCSVNSASGNSSNSSSSGSGNGNGIGIEISGVVLENNSHHSHHLSSSSSANLVINGLTSSNSINSNNNNNNNNGSLHCQSMSLHGQGQGQGLGPVQEQVASGKPSLHLPMAMSLESRDLKSSSQQGHIIMSGGGSSGVHTNEIQQLHQHPNHYNSSNNPLSMMGGMMQQQHVNMQHQQQQQQMMQGQFPQHGSMMNNRQMPALVALSNLGDESPVSSNVCGQMNSSLELDDNDLSPDEDDDELDTELDELDAAKQQLIDGGSSSSTSLQAPPSQHGSGSGGSGGHTPGSKKDKPIYNCLLCPKSYRKRKSLLDHYKMHPGFCHDCGQPNGNTLEEIIHHNRTMHVKEFPFVCETCGESYSRKQQFHAHVDSHSKKDFKTFPCGECGLKFPQKKLQQHFEETGHKADGAICEVCGEEFTSKNALYQHIIRVHKRDNFFECHICHNRFTLKANLERHVQLHTEVKRTYVCDLCGSSYYTYPALKEHYSNAHVDVSECKCTLCGKRFGSAKSLQRHLPSHSEERPHCCNYCDQTFKWKTHLVRHKQTAHGNQTPPPKKGKQRFPKANEEAEMAALPDMPGPPPVKASKKSTAGKAKSQAATGTAGASLQQQQKGAAATPTPPPPVSTTPGCLQQDQFNAAMVSSNSSQSSTASTSQHSVSTSESQQNSIYNQSFNAEKLPPGQQAPPPQQQQQPPPPPNALHQQHPTPPPTQQQQQQQPRASPADMHLQRMNSFGQEGQFHFEAGQAAGSYQQHQLISQYQQQQHLRSHTPQSPHSAHPPHPSHPSQIQQQQQPQHFTSPHHMPPMHHQHQLMMQQQQQHRHSQRSPLHHHPSTQQLQQQHQQPSHSPQHARLQSPQPPPVQQQQQQQQQQQQQQQFLQQQAADSWGNMNFGNPPNNQQELKDNKFYIVDSAEFLGLPMNVPPAQQQPPQPVSKPQQQQQPPPPQQQQQPQQDPALAGDLMSFQHMWPAPGFSQSPQQQQPQQQQPQGQANPGDPHNYNNIGSILTNLIDSPATMEYNFDLIQHQQQPTAQQQQQQAAQQQHHNAGGYPGALMRSGAVYGGAYEQHMSDQLVSDQQKQNSFQPYHLHGQQAQQQPPLHPHLLPPAATHGNVYERTAVGVGVGVGYSMLGDESKAVLPPMMGGMMQQMPPHGQQPDLIYYPVKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00474756;
90% Identity: iTF_00564215;
80% Identity: -