Basic Information

Insect: Drosophila athabasca
Gene Symbol: -
Assembly: GCA_008121215.1
Location: VMQQ01000019.1:865790-876848[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.35 24 5.4 1.8 1 23 697 719 697 719 0.96

2 7 1.4e-05 0.00094 19.3 1.1 1 23 725 747 725 747 0.98

3 7 6e-06 0.00041 20.4 0.2 1 23 753 775 753 775 0.98

4 7 2.8e-06 0.00019 21.4 1.4 1 23 781 803 781 803 0.98

5 7 0.00065 0.044 14.0 1.7 1 23 809 831 809 831 0.98

6 7 4.1e-06 0.00028 20.9 2.4 3 23 839 859 837 859 0.94

7 7 3.2e-05 0.0021 18.1 3.4 1 23 865 888 865 888 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.35	24	5.4	1.8	1	23	697	719	697	719	0.96
2	7	1.4e-05	0.00094	19.3	1.1	1	23	725	747	725	747	0.98
3	7	6e-06	0.00041	20.4	0.2	1	23	753	775	753	775	0.98
4	7	2.8e-06	0.00019	21.4	1.4	1	23	781	803	781	803	0.98
5	7	0.00065	0.044	14.0	1.7	1	23	809	831	809	831	0.98
6	7	4.1e-06	0.00028	20.9	2.4	3	23	839	859	837	859	0.94
7	7	3.2e-05	0.0021	18.1	3.4	1	23	865	888	865	888	0.98

Sequence Information

Coding Sequence: ATGTTGCCGCTGCAGGAGCAAGTGCAGCAGCCGCAACCCCAGCCCTTTAATTGGCAACTGGAGGATTACGCCTACTTTCGAAAATGTGGAGAACTTACCACATCGCCGGATGTGCAGAGCTTTGGCTTCAATTGCGCCTTCTGCCCTGCAATTTGCCTGCAGTTCTCGGTGTTTATGGATCACATTCGCAGCCAGCACATTCAGGACGTGAGACGACGGTATGAGGACTCCGAGGATACAATCGAACAAACAACACAAACAGATTTAATGATAATGGAAATGGACTGCCATGACATATTCCAACTGGAAGACCAAGACCAGACCACAGCCAACAAATGCACTAAGAAATCGAATTTGAACGGGCTAGAGATTGAGGCGGAGGCGGAATCCACGATAGCGGCAGACACGCAACGCCTGGGGGTGATAGACATGGACATTCAGCTAATGAATATAGTGGCGGCGACCCCCACAATGCAGCTATCCCATGCAGTGGGAACACCCGAAATAGATTTGGTTTATGTTATGGAAAATCCATTGCCACCCTCACCGCCGCCATCCGCGGACATTTCGGGTGACGAGCAGACCTGCCTGCAGGCACTGGGCCCGTTTGAAGTGCTTCATGAAGTGGTGGGCATGGTCCCGCCTACGCCGACGCCCTCACCTTTGGCTGGGATTGGCGCTAGCGTTGGGGTCGCTCCACTTCCAACGCCGCGATACGAGACACGACGCGTGGCAATGCAGCGCAAGCTTCGTCAGGCGGAAAACGAGAATGCAAAAGATTTCAGCCggcaagaggcagaggcagagacagaagcagacgcagcggcagcggcagagagagagccagagacgGGAGTGGCAGATGCCACACAATTCTCCACCGAAAACGTGTCGGAGCTAACACCGCCAGCGACGCCTCCAACCCCAGGGCCGCCCACATCCCCCACGAGTAGCATTGGCAGCAACGTGGACTTCCAGGCGCGGACTCGTCGCGAACTGGAACGAAATCGAGAATTCGTTGGCTCTCTGCTGGCGGCCTATGAACGCATGGAAAAGTTGTGGAATCCACGGCATCCCGACTACAAGTACAATGCCAAGCGAAGTGTTTACGGAGAACTGGCTGCCCCGCTGGAGGGCATCTGCCAGATGCAGCTGACGGGCGTCGAAATCTTTGCCGTACTCAAGGAGCTGCGTGGCCGCTATCGCCGGGAGCTGAGCAAGCTGAATGCCCTCGGGGGGAAGTACAAGTCCCGCCTGTGGTACTTTGACAAGATGCACTTCCTCAGAGGCGTCATCGAGAACAAGCGGGCCGAAAGGGAAGCCAAGATCAGCAATGATAGCACCGAAAGCGAAAAGTCCTGCGAAACCGATGGCGAGTCCTGCAGCAAGTCTGCCCTGTACCGTGAAGTGCTCAGCTTCATACTGGATGCGTTCAAGCGGCTGGAGTGTCTGTGGAATCCGCAGCACTACGAGTATGCCAGCTGCTGCAAGAAGGAGCTGTACCGGGAGATCTCCGCCCAACTGCAGGAGGAGCTCAACTACGAGCTGAGTGGCGAGGAGTGCCACAAGGAGATACAGAAGCTGAGGACGCGCTACCGCAAGGAGCTGCGCATGGTGATCAAACACAAGGGACTGTATCTGCCCAAGCTCTGGTGCTACGACGAGATGGAGTTCCTGCATCCGATACTGCAGGAACAGATCTTCAATAAGATCAGCAAGAAAGTCGGTGTGGTGGAGACCAACCAGAAGACGAAGTTCATCGATGCCAGCTGCATTGAGTTCGGAACGGCAGAGGATCAGCTGCAGTTTGTGGAGATATATCGCAATTATGCGGCCTTGTGGGATGTGGATCATCCCGACTTTAGATCGAATGCCTACCGCAGTCAGGCGCTGACCCAGATGTTGGACGAACTGAACACAACCTTCCACACGGCATATGCCGCGGAGCAACTGGAGAAGACCCTGTTCGAGCTGCGCAAGGACTTTTCAGCGCAGAAACGGAAAATACTCACCAACCCAGGGGACTCGTGCAGCATTCCCCTGCTGCACGCAAGACTGGCAGACTTTCTGGAACAGAATCTGGGTCCCTTCCGCTGTGATGTCTGCTCGGAGCTCATCAAGACCTGCGACCAGTATAAGGTGCATCGGTCCGGACACGACGGCACCCCGCCCTTCATTTGCACGCTCTGCGGCAAGGGTTTCCAGATGCCGTGCAATCTGACCGTGCACATTCGACGGCATCGTCGCGACTTTCCCTATGCGTGCGAGAAGTGCGACAAACGCTTTGCCACATCCACAGAGGTGGCCATCCACCTGCGGACGCACACTGGGGAGCGGCCCTACATTTGCGACCTGTGTGGGAAATCCTTCAAGACGTGGTCCTTCTTCGATATCCATCGGCGCAGGCACCTCAACCAGTCGACATTCAGCTGCACCATCTGTGAGAAGGGGTTCTACGAGAAGAATCGCTTCACCGACCACATGAACTCCCACTGGGCCATACGCAAGCACCTGTGCACGGTGTGTGGCAAGACCTTCACCACCTACGGAAACCTCAAGAAGCACACCGAACTGCATTTGGCCGTGAAGAAGTACAAGTGCTGCACGTGCGGCAAACGATTCGCCCAGTTCGCCAGTCTGCGCTGGCACAGAAAGCGGGCACACGGCTCTGGGCAATCGGAGGAGAAGTAG
Protein Sequence: MLPLQEQVQQPQPQPFNWQLEDYAYFRKCGELTTSPDVQSFGFNCAFCPAICLQFSVFMDHIRSQHIQDVRRRYEDSEDTIEQTTQTDLMIMEMDCHDIFQLEDQDQTTANKCTKKSNLNGLEIEAEAESTIAADTQRLGVIDMDIQLMNIVAATPTMQLSHAVGTPEIDLVYVMENPLPPSPPPSADISGDEQTCLQALGPFEVLHEVVGMVPPTPTPSPLAGIGASVGVAPLPTPRYETRRVAMQRKLRQAENENAKDFSRQEAEAETEADAAAAAEREPETGVADATQFSTENVSELTPPATPPTPGPPTSPTSSIGSNVDFQARTRRELERNREFVGSLLAAYERMEKLWNPRHPDYKYNAKRSVYGELAAPLEGICQMQLTGVEIFAVLKELRGRYRRELSKLNALGGKYKSRLWYFDKMHFLRGVIENKRAEREAKISNDSTESEKSCETDGESCSKSALYREVLSFILDAFKRLECLWNPQHYEYASCCKKELYREISAQLQEELNYELSGEECHKEIQKLRTRYRKELRMVIKHKGLYLPKLWCYDEMEFLHPILQEQIFNKISKKVGVVETNQKTKFIDASCIEFGTAEDQLQFVEIYRNYAALWDVDHPDFRSNAYRSQALTQMLDELNTTFHTAYAAEQLEKTLFELRKDFSAQKRKILTNPGDSCSIPLLHARLADFLEQNLGPFRCDVCSELIKTCDQYKVHRSGHDGTPPFICTLCGKGFQMPCNLTVHIRRHRRDFPYACEKCDKRFATSTEVAIHLRTHTGERPYICDLCGKSFKTWSFFDIHRRRHLNQSTFSCTICEKGFYEKNRFTDHMNSHWAIRKHLCTVCGKTFTTYGNLKKHTELHLAVKKYKCCTCGKRFAQFASLRWHRKRAHGSGQSEEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00484618;
90% Identity: iTF_00517951;
80% Identity: -