Dath013880.1
Basic Information
- Insect
- Drosophila athabasca
- Gene Symbol
- kn
- Assembly
- GCA_008121215.1
- Location
- VMQQ01000019.1:1500625-1502673[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-120 6.4e-116 387.7 0.0 205 385 1 210 1 212 0.99 2 2 3.3e-08 0.00024 19.3 15.0 422 522 213 313 209 330 0.71
Sequence Information
- Coding Sequence
- ATGCGCCGATTCCAGGTGGTCATCTCCACACAGGTGGCCGTGGAcggacccctgctggccatcTCCGACAACATGTTCGTGCACAACAACTCGAAGCACGGACGGAGGGCCAAGCGGCTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATATCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCGCCTCTGCCGGTGGCCACGCCCTGCATCAAGGCGATCTCCCCGAGCGAGGGCTGGACCACGGGCGGCGCCACAGTCATCATTGTGGGCGACAACTTCTTCGACGGCCTGCAGGTGGTCTTCGGGACGATGCTCGTGTGGAGCGAGCTGATCACCTCGCACGCCATCCGCGTCCAGACCCCGCCCAGGCATATACCCGGCGTCGTGGAGGTGACGCTCTCCTACAAGAGCAAGCAGTTCTGCAAGGGATCGCCCGGACGCTTTGTCTATGTCTCAGCTCTCAACGAACCCACAATCGACTACGGATTCCAGCGCCTGCAGAAGCTCATACCACGCCACCCCGGCGATCCGGAGAAGCTGCAGAAGGAGATCATATTGAAGCGGGCCGCCGACCTGGTCGAGGCCCTCTACTCAATGCCCAGATCTCCGGGCGGCTCCACCGGCTTCAACTCCTATGCCGGACAGCTGGCCGTCAGCGTCCAGGACGGCACCGGCCAGTGGACCGAGGACGACTACCAGCGCGCCCAGTCGAGCAGCGTGAGTCCACGCGGCGGCTACTGCAGCAGCGCCTCCACGCCCCACAGCTCGGGCGGCTCCTACGGCGCCTCGGCCACcacagcggcagtggcagccacgGCCAATGGCTATGCGCCCACACCCAACATGGGCACGCTCTCCTCCTCGCCGGGCAGCGTCTTCAACTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGTTCGTGCAGCATCATCATGTGGCCGCCGCCCATCCGCACCACTATCCGCATCCCCACCAGCCGTGGCACAATCCGGCCGTGTCAGCAGCCACAGCGGCGGCCGTTTAA
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGASATTAAVAATANGYAPTPNMGTLSSSPGSVFNSTSMSAVSSTWHQAFVQHHHVAAAHPHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00615327;
- 90% Identity
- iTF_00484185;
- 80% Identity
- iTF_00480620;