Basic Information

Gene Symbol
grh
Assembly
GCA_008121215.1
Location
VMQQ01000022.1:516310-542849[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.095 7.1e+02 -1.0 0.6 78 110 178 210 142 241 0.54
2 2 1.3e-63 9.8e-60 201.3 0.4 24 221 348 540 334 542 0.94

Sequence Information

Coding Sequence
ATGCAGGAGGCCACGAGCAGCACCAGCTATGCGCTGTCGTACACGGATTGGATGGCCGAGCCACGCCGCGGCTTCAGCCTGGACTCCCTGCATTCGGCTGCAGAGCAAAGCGAacaccaggagcagcagctccttTCGCATTCGCATCCCCATCCGCACTACCAGGATCATGGCCTGAGTTTgtccctgccactgccccaccAGGAGCACCAGGATCACCACCAGCAGTCTGTCCTTTTGCTGAatgaggagcagcagcagcagcatcagcaccacCCTGCCCCACACACCATCGCCAGTCCAGGGCCATATCCCATCTACAGCTACTACCGCCAGCAGAGCCACGAGGCCTCCAAggaaaccaacaacaacaacaacaacaacgaaccCCATGGGTCTGAAATGCTCTGGAGTGGAAAGCTCAATGGCCAGACCACACCCATCGATGTCTCGGGCCTATCGCAGAATGAGATCCAAGGCTTTCTGCTCGGCTCCCACCCCTCGTCATCGGCCTCGGTGAGCACCACTGGCGTTgtctccaccaccaccatctcgcagcaccaccagcagcagcagcagcagcaacagcagcaacagcagcagcagcagcagcagcatcctggCGACATTGTGAGTGCCGCAGGCGTGGGGAGTGCCGGTTCCATTGTCTCGACGGcggtgcaacagcagcagcagcaacagcagcagctgatcACCATCAAAAGAGAGCCGGAGGACCTGCGCAAGGACCCGAAGAACGGTAACATTGCCGGAGCGGCGGCAGCGAACGGCGGAGCGGGTTCGGTCATAACGCAAAAGTCCTTCGATTACACGGAACTGTGCCAGCCGGGCACCCTCATCGATGCCAATGGCAGCATACCCGTGTCCGTGAACAGCATCCAGCAGCGGACAGTGGTCCATGGCAGCCAGAATAGTCCGACCACCTCCCTGGTGGACACGAGCACAAACGGTTCGACGCGTTCGCGGCCCTGGCACGACTTTGGCCGCCAGAACGATGCcgataaaatacaaataccaaAAATATTCACAAATGTTGGCTTCCGATATCACCTGGAGAGCCCCATCAGCTCGTCGCAGAGGCGAGAGGACGATCGCATCACCTACATCAACAAGGGCCAGTTCTATGGGATCACGCTGGAGTATGTGCACGATGCGGATAAGCCCATCAAGAATACGACGGTTAAGAGTGTGATCATGCTCATGTTCCGCGAGGAGAAGAGCCCCGAAGATGAGATCAAGGCCTGGCAATTCTGGCACAGTCGCCAGCATTCCGTAAAGCAAAGAATCTTGGATGCAGATACGAAGAACTCGGTTGGCCTGGTTGGCTGCATCGAGGAAGTGTCGCACAATGCCATCGCCGTTTACTGGAATCCGCTGGAGAGCTCCGCCAAGATCAACATTGCGGTGCAGTGCCTGAGCACGGACTTCAGCAGTCAAAAAGGAGTCAAGGGCCTGCCGCTGCACGTACAAATCGACACATTCGAGGACCCCAGAGATGCGGCCGTCTTCCACCGGGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGAGCCGAGCGCAAGACGCGCGATGAGGAGCGACGGGCCGCCAAGCGAAAGATGACGGCCACCGGCAGAAAGAAGCTGGATGAGCTCTACCATCCGGTGACAGATCGGTCCGAGTTCTATGGCATGCAGGACTTTGCCAAGCCGCCGGTGCTCTTCTCGCCCGCCGAGGACATGGAGAAGAGCTTCTACGGCCATGAGACTGACTCGCCGGACCTGAAGGGGGCCTCGCCGTTCCTGCTCCACGGCCAGAAGGTGGCCACGCCGACGCTCAAGTTCCACAATCACTTTCCGCCCGACATGCAGACCGATAAAAAGGATCACATACTGGATCAGAACATAATGACCAGCACACCCATGACCGACTTTGGTCCGCCCATGAAGCGGGGACGCATGACGCCGCCCACCTCGGAGCGTGTGATGCTGTACGTCCGGCAGGAGAACGAGGAGGTCTACACGCCGCTTCATGTGGTTCCGCCCACCACCATTGGCCTGCTGAATGCGattgaaaacaaatacaaaatctCAACAACGAGCATAAATAACATTTATCGCACAAACAAGAAGGGGATTACTGCGAAAATTGACGATGATATGATATCGTTCTACTGCAATGAGGACATCTTCTTGCTGGAGGTACAGCAGATCGAGGACGATCTGTACGATGTGACGCTGACGGAGCTGCCCAACCAGTAG
Protein Sequence
MQEATSSTSYALSYTDWMAEPRRGFSLDSLHSAAEQSEHQEQQLLSHSHPHPHYQDHGLSLSLPLPHQEHQDHHQQSVLLLNEEQQQQHQHHPAPHTIASPGPYPIYSYYRQQSHEASKETNNNNNNNEPHGSEMLWSGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSASVSTTGVVSTTTISQHHQQQQQQQQQQQQQQQQQHPGDIVSAAGVGSAGSIVSTAVQQQQQQQQQLITIKREPEDLRKDPKNGNIAGAAAANGGAGSVITQKSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDAAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNIMTSTPMTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-