Basic Information

Insect: Drosophila asahinai
Gene Symbol: -
Assembly: GCA_008042795.1
Location: VNJZ01011552.1:161238-163692[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 6.2 5.6e+02 1.6 0.3 6 23 274 291 274 291 0.89

2 8 0.0002 0.018 15.7 0.7 1 23 297 319 297 319 0.99

3 8 0.034 3.1 8.7 5.8 1 23 328 350 328 350 0.95

4 8 0.00019 0.017 15.8 0.6 2 23 359 381 358 381 0.95

5 8 0.00046 0.041 14.6 0.0 3 23 389 409 388 409 0.96

6 8 0.00082 0.075 13.7 1.2 2 23 418 440 417 440 0.96

7 8 1.9e-07 1.7e-05 25.2 1.3 1 23 477 499 477 499 0.98

8 8 1.2e-05 0.001 19.6 3.2 1 23 505 528 505 528 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	6.2	5.6e+02	1.6	0.3	6	23	274	291	274	291	0.89
2	8	0.0002	0.018	15.7	0.7	1	23	297	319	297	319	0.99
3	8	0.034	3.1	8.7	5.8	1	23	328	350	328	350	0.95
4	8	0.00019	0.017	15.8	0.6	2	23	359	381	358	381	0.95
5	8	0.00046	0.041	14.6	0.0	3	23	389	409	388	409	0.96
6	8	0.00082	0.075	13.7	1.2	2	23	418	440	417	440	0.96
7	8	1.9e-07	1.7e-05	25.2	1.3	1	23	477	499	477	499	0.98
8	8	1.2e-05	0.001	19.6	3.2	1	23	505	528	505	528	0.98

Sequence Information

Coding Sequence: ATGCCGTGTTTTTTGTGCACGGAGCATGCGGACGACGTCGTGGGCAACATCCAGTTCGCCTCTGAGAGGGCCGACACCGTGGGCCTGCGACGCATCATCGAGCAACACTTTTGGCTTCGGGTACATGACTCAAGCAGCGGCTACGTATGCGGCGGTTGcttggagcagctgctgctcttccACAGCTTCTACAGCATGGTGGAGCAGGCCCACAAGGCACTGGAGGAGACGACACATGTGACGGTGGCTTCTCTGCCCACAGAAGTGCTTTCTACAATTCTTGGAGGAGGCGATGGGGTGGTGAAGAGTGAGGAAGTAGAGAGCGTGGCGGCTGCCGTAAAGCGCCGGCGAGGACGTCCCCGCAAAACGGAGGTAAAGGATGCCAGCGAGGAGCTCAAGAGCGTGCTGGAACAGATCAACTTGAACGAGATCAAAATTGAGTACCCCGAGGCGGACCTGACCATAGCCGATGTGCTGGAAGACCAGGAGGAGCACGAGTACATGCCAAGCGGCTGCGAGGACGATGGTGAGGATAATGAATTATTGGCGGAGATACCGCAGCCCAAGGTCCAGCGCAAAGCTCGCGGTCGTCCCAGAGCGCGTGGACGTGGCCGTGGGCGGGGAAAGGTGCGCCTGCCTGAGcggccaaagccaaagagaACTGGTGTGCCGAACATGGCGAAGTCGAAGGAATTCAACGATTACATTCGGGAGCACTACAAGGTCCATTGCCCCGTCTGCAGCTCGCCCATGGAGGGATTCTCGGAGATGCTGGTGCATGTGCGGCGCGAGCACAAGCAGCGCGGCTACTCAACGTGCTGCAACCGCAAGTTCTGGAAGCGAGGCGTCCTCGTCGACCACCTGCGCCGCCACCAGGACCCGGAACTCTTCAAGTGCACCATCTGCTCGCGCGTGATGGGCCAGCGCCGGAGTCTGGAGCTGCACATGCGCATGCACGAGATCAAGGCCAACGGACGCCTCTACCAGTGCGAGCACTGCTCCAAGAGCTTCTACAGCTCGGTGGTGTGTGAGCGCCACAAGCTGACGCACATTCCCCGGGATCAGTGGCAGATCAAGTGCACAAACTGCGAGAAGACTTTCCCCACTGAGTACCTGATGAAGCAGCATGTGAAGCTGGTCCACCTGAatttatatgccaagatctGCGATGTCTGCGGCAAGTCAATCCGCGGCAGGGAGGCCTTGGCCCGCCATATGGAGGAGCACACGGGCGCTCCACAGGCAGCCATTAGCTGTCATCTTTGTGACTCGAAGCTGACCACCAAATATGGCCTGGCTAGGCACATAAAGATGATGCACACCGCCGAGAATCTGCAGCCGATGCAGTGCGAGCACTGCCTGAAGATCTCGCCCAGCCTGCAGGCGCATCAGCACCACCTGAAGTACACCCACAACACGGCTCGCACGCACCAGTGTCCGATGTGCGAGAAGGCCTTTAAGCGTCCCAACGAGCTAAagGAGCACATGACCACTCATACCGGGGAGGTGCTGTACACCTGCCCCCACTGTCCGCAGACCTTCAACTCGAACGCCAACATGCATGCCCACCGGAAGAAGGTGCATCGCAAGGAGTGGGAGGAGAACCGCCACAAGCGCCAGTACTCGGCACGGAAATCGGACACGATCATTGCCGTAAGCGTGCGCAAGACGACGGAGGCCCGGCTTGACGGAGGCGCAGGAGCGGCGGCAGCCGTAAGCACGGGAGCCGAATGCTAG
Protein Sequence: MPCFLCTEHADDVVGNIQFASERADTVGLRRIIEQHFWLRVHDSSSGYVCGGCLEQLLLFHSFYSMVEQAHKALEETTHVTVASLPTEVLSTILGGGDGVVKSEEVESVAAAVKRRRGRPRKTEVKDASEELKSVLEQINLNEIKIEYPEADLTIADVLEDQEEHEYMPSGCEDDGEDNELLAEIPQPKVQRKARGRPRARGRGRGRGKVRLPERPKPKRTGVPNMAKSKEFNDYIREHYKVHCPVCSSPMEGFSEMLVHVRREHKQRGYSTCCNRKFWKRGVLVDHLRRHQDPELFKCTICSRVMGQRRSLELHMRMHEIKANGRLYQCEHCSKSFYSSVVCERHKLTHIPRDQWQIKCTNCEKTFPTEYLMKQHVKLVHLNLYAKICDVCGKSIRGREALARHMEEHTGAPQAAISCHLCDSKLTTKYGLARHIKMMHTAENLQPMQCEHCLKISPSLQAHQHHLKYTHNTARTHQCPMCEKAFKRPNELKEHMTTHTGEVLYTCPHCPQTFNSNANMHAHRKKVHRKEWEENRHKRQYSARKSDTIIAVSVRKTTEARLDGGAGAAAAVSTGAEC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00541314;
90% Identity: iTF_00609393;
80% Identity: -