Basic Information

Insect: Drosophila asahinai
Gene Symbol: -
Assembly: GCA_008042795.1
Location: VNJZ01011987.1:182990-185578[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0032 0.29 11.9 0.5 1 23 193 215 193 215 0.98

2 7 0.013 1.2 10.0 4.4 1 23 539 561 539 561 0.96

3 7 1.5e-05 0.0013 19.3 2.6 1 23 567 589 567 589 0.98

4 7 6.3e-06 0.00057 20.4 1.4 1 23 595 618 595 618 0.97

5 7 2.1e-06 0.00019 21.9 2.9 1 23 624 646 624 646 0.97

6 7 6.2e-06 0.00056 20.4 0.7 1 23 652 674 652 674 0.98

7 7 1.7e-06 0.00016 22.2 0.7 1 23 680 702 680 702 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0032	0.29	11.9	0.5	1	23	193	215	193	215	0.98
2	7	0.013	1.2	10.0	4.4	1	23	539	561	539	561	0.96
3	7	1.5e-05	0.0013	19.3	2.6	1	23	567	589	567	589	0.98
4	7	6.3e-06	0.00057	20.4	1.4	1	23	595	618	595	618	0.97
5	7	2.1e-06	0.00019	21.9	2.9	1	23	624	646	624	646	0.97
6	7	6.2e-06	0.00056	20.4	0.7	1	23	652	674	652	674	0.98
7	7	1.7e-06	0.00016	22.2	0.7	1	23	680	702	680	702	0.98

Sequence Information

Coding Sequence: ATGGAGCGCAAGGAAGTGGAGCAACAGTTCATGGATCACACGCTGCTCGCCACGGAGCTAATGCGAGACCCAAATCACTTTATAATGGATCTCATAGATCACACCTACAAGGCGGAAGGGCCCACGAACCTCAGCACGAGTACCGTGGTGGGAAACCATCACCCCGCTGGCTCCGCCTACGCGGATGTGGAGATAAAGGACACCTTGACGCCGGAATCCCTAAACACGATTTTCCAGTTTGTGAACAAATCGTCTTCGCCGGAAAgtgtggagcagcagcagcagcagcagcagctccaggttagccaccaccagcagcagcagcctcaggAAGTCAACCAGCAGACCGCTTTTCCCGCTCTGGGTAGCATTGAGCCCATCCCGGTGCCCATCATGGATGTGGCCACCGAGGAGCTGCTGTACAACAATGCCCACAATGCGTCGTCCTGCATGAATGCCAGAAAAGTGCTGCCGCACAAGAAGAGGATCTCGCGGAAGCTGAAGGGCAATATAGACAACGATCTGGAGCAGCACAAGGAGCACGTCCAGGATGTGGCACCCGGCTCCTCATCGCTCTACAGCTGCGAGATCTGCGGCTATGCGGTGCACACGCAACTGGATTTCTTTGCCCATCTCAAGGAGCACTATGAGCCCACGGTcttggagcagcagcggctggtTCAGGTCCAGGATCatccgcaacagcagcatcagaAGGAACCGCTGGATATGTGCGGCTTGTCCGCTCAAGATAAGCTCCAACAGGAACAAGCTAAACTGGACCAAGTCTTCCACGATGTCCAGCTAAACTTTGAGAACTTCCACAGCATCAGTCACCACCATGtggacgatgacgacgatgtGGCCCATGATGTGGGCGTCAACATGGTGTTGCATGGCCAGCCCTCGGATAAGCTCAGTCCCGTTGTGGTTGTCGTCAACTCCAGTGCCACGCCAAACCCCATACCCATACCCGTGGTCGACGATGATGTGGAGTTCAGCGACACGGAGGACATGCTGGAGGGGATACGGAATGTGGTGGACAAGGTGTCCATTGAGGACACCTGCGATGAGCTGGTGGATCTAGAGCTGACCTCCAGTGGAATGACGGCTCCCTGGTTCAACAACAACTTCAGGGACATCACTTTTCCGAACCTCATGTTGCCTGGcgaaccgccgccgccatcggCCTCAGCAGCTCCGGCCCTCCTCAAGGAAAACTCGCACATGTCGTTGGATTTCCTCAGCCCCGAAAAGGCGGAACCTAAAATGGAGAGGCCCCTGCCCAAGGCCAGCGAGGCCATTGAGCAGGCCTTGTTGGTGGCGCCACCAGCTTGCCAAACACCCTCGCCACCTCCttctcatcctcatcctcatgcTGTTCATCCTGTTCTACCTCTGCCCAACTCCAACTCTTCCATCGAGCAACTCCGACGGTCTCCTCTAGTGCTAGGCGCAAGCTTCAAGTTGGAGGAAGACGACAGCAGGCCACCCTCCCCCTTTGATGAGGAAGAAGAAGATCATCCCGAGGCTGAGGAGCACCAAGAGAGCTTTTCGCTGGAGGGAATAGACAACAGCTTATCCGAGGAGGCACTGGGAAAGTCAAGAAGAAAGCATTTTTGCGACAAGTGCAGTCGGGACTTCAACTCGTACAATGCCCTGAAGTACCATCAATATACACACAACCAGGAGAGATCCCACAAGTGTGAGAGCTGCGAGAGATCCTTCTACACGCAAAGTGCCCTAAAGGCCCATGAAAAAACCCATTCCGGTGTGAAGCCCTTCAAGTGCGAGAAGTGCGACTTCAAGTTCCGGCAATGGGGCGATCTCAAGTACCACATCATCTCCCGGCACAGCGACATCAAGGCGCACATGTGCGAGTTCTGCGGCAAGTCCTTCTCCCGGCGATATTCTCTCGTTCTCCACCGGAGAATCCATACCAGTGAACGGAACTATGCCTGCCAGTACTGCGAGAAAACCTTTCGCGCCAGCTCGTATCTGTTGAGTCACATCAAAGTGCACACCGGGGAGCGGCCGTACGAGTGCTCCATTTGCGAAAAGAAATTTCGGGTATCGGGGGACCTTAAGCGACACTCACGCATCCACGATCCCTCCAGAATCAGTCAAGCTCCCCtagaaaaggggaaaaagaaggcagctgctcctgctgctgctggcaatataaaactaaaggaAGACCACCAGGTGGCCACCACCAATAACCCACAAAACCATAAGTCTGAGCAGGAAACTTTAGGCTTATAG
Protein Sequence: MERKEVEQQFMDHTLLATELMRDPNHFIMDLIDHTYKAEGPTNLSTSTVVGNHHPAGSAYADVEIKDTLTPESLNTIFQFVNKSSSPESVEQQQQQQQLQVSHHQQQQPQEVNQQTAFPALGSIEPIPVPIMDVATEELLYNNAHNASSCMNARKVLPHKKRISRKLKGNIDNDLEQHKEHVQDVAPGSSSLYSCEICGYAVHTQLDFFAHLKEHYEPTVLEQQRLVQVQDHPQQQHQKEPLDMCGLSAQDKLQQEQAKLDQVFHDVQLNFENFHSISHHHVDDDDDVAHDVGVNMVLHGQPSDKLSPVVVVVNSSATPNPIPIPVVDDDVEFSDTEDMLEGIRNVVDKVSIEDTCDELVDLELTSSGMTAPWFNNNFRDITFPNLMLPGEPPPPSASAAPALLKENSHMSLDFLSPEKAEPKMERPLPKASEAIEQALLVAPPACQTPSPPPSHPHPHAVHPVLPLPNSNSSIEQLRRSPLVLGASFKLEEDDSRPPSPFDEEEEDHPEAEEHQESFSLEGIDNSLSEEALGKSRRKHFCDKCSRDFNSYNALKYHQYTHNQERSHKCESCERSFYTQSALKAHEKTHSGVKPFKCEKCDFKFRQWGDLKYHIISRHSDIKAHMCEFCGKSFSRRYSLVLHRRIHTSERNYACQYCEKTFRASSYLLSHIKVHTGERPYECSICEKKFRVSGDLKRHSRIHDPSRISQAPLEKGKKKAAAPAAAGNIKLKEDHQVATTNNPQNHKSEQETLGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00526087;
90% Identity: iTF_00609345;
80% Identity: -