Basic Information

Insect: Drosophila asahinai
Gene Symbol: prg
Assembly: GCA_008042795.1
Location: VNJZ01005515.1:80688-82415[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.24 21 6.0 0.5 1 23 204 227 204 227 0.90

2 9 0.065 5.9 7.8 0.9 1 23 233 256 233 256 0.97

3 9 4.5e-06 0.00041 20.9 0.5 1 23 262 284 262 284 0.98

4 9 4.5e-09 4.1e-07 30.3 2.3 1 23 290 312 290 312 0.99

5 9 6.9e-05 0.0063 17.1 1.6 1 23 318 340 318 340 0.98

6 9 8.3e-06 0.00076 20.0 1.3 1 23 346 368 346 368 0.99

7 9 2.5e-05 0.0023 18.5 0.5 1 23 417 439 417 439 0.96

8 9 1.6e-05 0.0015 19.1 0.3 1 23 444 467 444 467 0.91

9 9 0.25 23 5.9 0.7 1 23 471 493 471 493 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.24	21	6.0	0.5	1	23	204	227	204	227	0.90
2	9	0.065	5.9	7.8	0.9	1	23	233	256	233	256	0.97
3	9	4.5e-06	0.00041	20.9	0.5	1	23	262	284	262	284	0.98
4	9	4.5e-09	4.1e-07	30.3	2.3	1	23	290	312	290	312	0.99
5	9	6.9e-05	0.0063	17.1	1.6	1	23	318	340	318	340	0.98
6	9	8.3e-06	0.00076	20.0	1.3	1	23	346	368	346	368	0.99
7	9	2.5e-05	0.0023	18.5	0.5	1	23	417	439	417	439	0.96
8	9	1.6e-05	0.0015	19.1	0.3	1	23	444	467	444	467	0.91
9	9	0.25	23	5.9	0.7	1	23	471	493	471	493	0.97

Sequence Information

Coding Sequence: ATGTACGCGAGTGTGAGCACGTGCCGGCTGTGCCACCGCGAGGCTGAGGCAGAGTCACCGAACATCTTCGAGAGCTCCATGGAGTTCTGCAAGGATGGGTCCATTGCAGAGATCTCGCAGCATCTGTGGGCCGTTCACTACGAACGCCATGAGTTCTTGCCGGAGCTCGTGTGCGCGGAGTGCCTGGAACTATTGCACGATGCTTTCGAGCAGCGCAGGGGCATGCAGGAGCGGGAACAGGGGCTGCAGGAGCAGCTAAAGGAGATGTTGAAAATGGATGCCAAGTACCGGTCCGGCTTGAATGGCAATCAGGGTGAATTTGAGCCCGAGGCGGACTGCGACATTGTGGACGTGGATCCGGAGAAGCTGTCGGAGACCAGTGAAGACGAATTTCTGCTTTGCTCGGAAGGAGACTACGAGAACGAGGAGGACgatgaggaagaggaggaggatttcgatgaggaggacgaggaagaGGGTCAGAATGGCGACGATACCGAGATGCGGCTGGGCATGGACGCCGCTCAGATGGCGTCCATGGAGGCGGGGATGAGAGACGCCAATGCCAGTGCCGACCCCAACTCTGGGGTGGTACAACCCAAGCGCGCCTTCCTTTGCCAATACTGCGATCTGGGCTTCACCTTGCCAGCCGACTGCCAGGAGCACGAGAAGAGCGCCCACGACCCAGCTGCCCCGTACTGCTGCACATTCTGCGACCTCCGGATGACCGCCCGTACCGCTTTGATTGCTCACATCAAGATGCTGCACGATCCCGAGCGTCCGTATGTCTGTGCGCAGTGCCGGAAGGGTTTCGTGCGACGCTCCGACTTGAAGAAGCACACGATAGTGCACACGGGCGTGCGACCCTACACCTGCAACGTGTGCTCCAAGAGTTTCTCGAGGAACACCAACCTGAACAAGCACATGCGTATCCACAGCGGCGTCAAGCCGTTCGTTTGCCAGCACTGTCCGCGATCCTTTCAGACGGCCGTGGAAATGATGAGGCACTCGCGCTCCCACACCGAGGTGAAGGCCTACCAGTGTGGTCGCTGTCCATTTTCCTTTTCGCGCAAGGATAAGTTTATGGCCCACCAGCAAGTTCACACGAAGCGCGACGTagaacaccagcagcagcagttgggACAACTTCCGCCAATGGAGGGCGAACTGGCGCTGTTCCAGCAACCGCAACAGCTGCAGCTCCCGGGCAAGCCAAAGGCTCCAACGCAGGCGAAGTCCTCTCGCAACTTCCGCTGTGATGTCTGCGACAGGGGTTTCCAGAGAGAGCGCGACCTGCAGCGCCATCGAGCCCTACACATGGACACGCTGTTCGCCTGCAAGATCTGCAATCAGGGTTTCAATCGGCGGGAGCAACTGCAGCGTCATGAACTGGAGGCCCATGGGCCTAGCTATACCTGCGGGATCTGCTGCATTAACTTTCTGTATCAGGTTGAGCTGGAGAATCATCTTAAGGTCCACCAGTTGCAGCACAAAATGGCACAGAGTGCCCAAGAGGCCATCAATGCCGCTGCTAGTTTGCCACTCAAAAAAGTCGATCAGGCGCCGGTAACTGTACTGCCTCCGGTTATACAGCCCGCCGAACTCTCCTTCTACAGCAACATGATTCCCACCATGAATCTGGGCTTCTACAGCGAGACTCGGCCGGAGGAGTAG
Protein Sequence: MYASVSTCRLCHREAEAESPNIFESSMEFCKDGSIAEISQHLWAVHYERHEFLPELVCAECLELLHDAFEQRRGMQEREQGLQEQLKEMLKMDAKYRSGLNGNQGEFEPEADCDIVDVDPEKLSETSEDEFLLCSEGDYENEEDDEEEEEDFDEEDEEEGQNGDDTEMRLGMDAAQMASMEAGMRDANASADPNSGVVQPKRAFLCQYCDLGFTLPADCQEHEKSAHDPAAPYCCTFCDLRMTARTALIAHIKMLHDPERPYVCAQCRKGFVRRSDLKKHTIVHTGVRPYTCNVCSKSFSRNTNLNKHMRIHSGVKPFVCQHCPRSFQTAVEMMRHSRSHTEVKAYQCGRCPFSFSRKDKFMAHQQVHTKRDVEHQQQQLGQLPPMEGELALFQQPQQLQLPGKPKAPTQAKSSRNFRCDVCDRGFQRERDLQRHRALHMDTLFACKICNQGFNRREQLQRHELEAHGPSYTCGICCINFLYQVELENHLKVHQLQHKMAQSAQEAINAAASLPLKKVDQAPVTVLPPVIQPAELSFYSNMIPTMNLGFYSETRPEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00492409;
90% Identity: iTF_00590405; iTF_00531822; iTF_00606504;
80% Identity: -