Dasa008242.1
Basic Information
- Insect
- Drosophila asahinai
- Gene Symbol
- ttk
- Assembly
- GCA_008042795.1
- Location
- VNJZ01006689.1:49156-53017[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-19 9.4e-16 57.5 0.0 2 45 496 540 495 540 0.97
Sequence Information
- Coding Sequence
- ATGTCCGTGCAGCAGTTCTGCCTGCGCTGGAACAACCACCAGCCGAACTTCATCTCGGTGTGCTCCTCCCTGCTGCACAATGGCACCCTGGTGGACGTTACGCTGGCCGCCGAGGGACGCCAGCTGCAGGCGCACAAGATCGTGCTGTCCGCGTGCAGCTCGTACTTTCAGGCTTTGTTTACCACAAATCCGTGCCAACATCCCATTGTTATCCTCAAGGACGTGCAGTACGATGACTTGAAGACAATGGTCGACTTTATGTACTATGGCGAGGTCAATGTGtcgcaggagcagctgccgcaCATCCTCAAGACCGCCGAAATGCTGAAGATCAAGGGTTTGGCGGAGATGCCCACGGATCCCGCCAATCTAACCAAATCCGATAGCAAGTCCTCCAACGACGGCACTGAAttggtgggcggcggcggcggcggaggaACGCATCACCATCAGATGCGACGCACACCGTCGCCGTTGAGCGCCGGCACCTCGCCGGCCACCAGGCGCAAGCGGTTGCGCAAATCCTCGAATAACGGCTCTGGCGAACGCAACAATgcggaggagcagcaccaCAACAGCTCTTTGGACGCGGGCAGTGGCACCGGCAATGCCGGCCTCAGTCTAGCCCAGATGAGCCAGATGTCATTCGGCGCTGGCGGCGGCCTGGCCGGTCACTCGCTGCACGCGGCCAAGCTGCTAAAGGAGTCGGCGAGCgccgagctggagcagcagccgcaggacTCGGATCTGGATGATGGCCACGGACACATACATATGCAAATTAAGCCCGAAGTGGACATTGGCGGCGTGAATCAAACGATGCCCCTGGACATCTCTGGCGCCACCACGCCCTCCGAGCACGATGCCCCCAACTCTCAGTCGTCGCACTCGGGTCTGCAATGGACAGTTGTCGATTCCAATTATCCGCGCTTCTCCCTTCCCGCCTGCCAGTCAGCCAACTTGCTGggcaatggcggcggcggtggcggcagcgGTGGTGCCGGCAGCCAGAGCAGCGGTGCTAATagtgccggcggcggcggcggtaatAGCGatcagcagcgccagcagcagcagcacgaggcccagcagcagcagcagcaggtggccacacagcagcagcagcatttgcagcagctgcactaccagcaacagcagcaggagcaggcagcagccgccgccgcagccgctgccgcagcagccgccTCCGGACAGGCCTACTCGTCGCAAATCATCACCGTGAACAACCTAGTCAGCGGCTATGCGACGGCAGCCCAGAACCTGTCACCCACCTCGCCCAACGAATCGAACATGGTGCAATCGGTGTACAGCCAAGGACCCACACCTACACAATCCCCAGTGCATGCGGCGGGGGGAGCGAGTGCGAGTGGGAATGCGGGCAATGCGGGCAACGGCAACGCCACGGGCGGAGGAGCGGGGGCCAATCAGGTGGTGAAGCGCAAGAGATCGGTGAATCCGCAGGGCGACGAGAACTTTATCCGCGCCCTGGAAGCGGTGCGAACGGGAGGCATTGGCTTCTGCAAGGCTGCCCGGCTGTACGGCGTGAACAATCGCACCCTGTGGCTGGAGTACAAGAAGCGGGGCTACCCAGTGTCGCGGCCGAGCATCAAGGCACGCGTGGTCAAGCAGGAACCGAATCTGTCGCCGTCGCCCACGCCATCGACGAATCCCGGCGATGATACCACCGAAACGCTTGGCATGCAGATACCACCGCAGGCGGATACACCGACGCCTTCGTCGCTCATGTGCACGCCGCATCACGCGggcatcggcggcggcggcggtggcagtggTGGAGCTGGAAGTCTGCCCGGTGCAGGCAACTCGCATCCGGCCATTGGGGTAATGAGCCTCTTCGATCCGCGATACATGGACACACCGGGCAACGTGCACTCAATGTCGCGGCAGCGGTACATCGACGccaccggcggcggcggggcgGGAGCTGGTGCGGGAACGGGCACGGGTGCCGGCACCATCAACGTCAATCCGACCACCGCCATGAATCTACAGAGTATTAACTTCAACTCGATATAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSNDGTELVGGGGGGGTHHHQMRRTPSPLSAGTSPATRRKRLRKSSNNGSGERNNAEEQHHNSSLDAGSGTGNAGLSLAQMSQMSFGAGGGLAGHSLHAAKLLKESASAELEQQPQDSDLDDGHGHIHMQIKPEVDIGGVNQTMPLDISGATTPSEHDAPNSQSSHSGLQWTVVDSNYPRFSLPACQSANLLGNGGGGGGSGGAGSQSSGANSAGGGGGNSDQQRQQQQHEAQQQQQQVATQQQQHLQQLHYQQQQQEQAAAAAAAAAAAAASGQAYSSQIITVNNLVSGYATAAQNLSPTSPNESNMVQSVYSQGPTPTQSPVHAAGGASASGNAGNAGNGNATGGGAGANQVVKRKRSVNPQGDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARVVKQEPNLSPSPTPSTNPGDDTTETLGMQIPPQADTPTPSSLMCTPHHAGIGGGGGGSGGAGSLPGAGNSHPAIGVMSLFDPRYMDTPGNVHSMSRQRYIDATGGGGAGAGAGTGTGAGTINVNPTTAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00480240; iTF_00541145; iTF_00540995;
- 90% Identity
- iTF_00480240;
- 80% Identity
- iTF_00480240;