Dari006883.1
Basic Information
- Insect
- Drosophila arizonae
- Gene Symbol
- HIVEP2
- Assembly
- GCA_001654025.1
- Location
- NW:573685-625304[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.00018 0.01 15.7 0.3 1 23 473 495 473 495 0.98 2 8 0.0014 0.079 12.9 3.6 1 21 501 521 501 525 0.89 3 8 0.011 0.63 10.1 0.1 1 19 1155 1173 1155 1176 0.93 4 8 2.5e-06 0.00014 21.6 2.0 1 23 1917 1939 1917 1939 0.99 5 8 2.7e-05 0.0015 18.3 5.3 1 23 1945 1969 1945 1969 0.92 6 8 0.00052 0.029 14.3 3.4 2 23 2465 2486 2465 2486 0.97 7 8 0.00072 0.041 13.8 1.2 1 23 2492 2516 2492 2516 0.91 8 8 0.0023 0.13 12.2 2.7 1 23 2537 2561 2537 2561 0.92
Sequence Information
- Coding Sequence
- ATGGCGCGACGCAAGGGCAGCGGACGTGGCAAATCCACTGTTAATTCTCGTAAAAATACTTTGGAGTCAACGCGCGAGAAATTGAAAGatgagccaacagcagcaaacacatCGCAGGCGAGCAAATTCGATGAGACTATGGaaagtgcagcaacaacaacggcaacagcaacaaacacagcGAAGCAACATtacaaaacagcaaacaaacaatacaaaactaacaacaacaacaacagcattaataatagcaacaacaacaaagtgagCAACACGCGacgtgcaacagcagcagcagcagcagcagcggccgccgcAGCACaggcaacaacgacaacaacaacagcagcaacggcaacaactaaGAAGCAAACATATCGCAGCAGCAATacaactgctgcaacaacagcaacaacaacaacactgaaaacaaacaacaacaacaacaaagtcaaggcaacaacagcaacaagtgaAGCAAACGAAGCAACTGAAGCAACTGAAGCAAccgaagcaacagcaattgacaacaacaaaagcaaacgagATAATTTAAGCGAATTGCCAGCTAAAATtgctgacagcaacagcagcagcagcagcaacacaagtaacaacaacaacaacaacaacagtgatAATAGTATTagtgaaaataattatgagtTTAAGGCTAGAGATAAAGCGAACGTAAGTGATAGCAAAATGACGCtacagcacagcagcaacaccaccaccaccacaaacagcaacaacaacaacaacaataacattagtatcagcagtggcagtggcagcagcacaaacaacaatgatgctgctgcagcaacagcaacagcaattgctgaCTGGAAGAGCAGCTCGAACAATTTGCGCTATTTGCACAAGAAGTTCAAACGTTTGGCCAGCACCACAGAAACGGAAGCTCCAGACGAACCAACACTGCGCACCACGTCGCTGTCGTCGAACAGCTCAGTGTCGCCGCCAACGCAATTGCCGCTGGTCAATGGGCAtgagcacagcaacagcaacagcatcagcaacagcaacagcaacagtcatgAGACCGAGAGCTATAGCAAAaatgcggctgttgctgttgctggcgtgcCACGCACGCGTACGCCtttgagcaacagcagcaacatcaacattagcagcagcagcagcagcaactatgcCAGCAATGCAACATTGTCGCCAGCCACATTtgcacagcatcagcagcagacgcagccaacgacaacagcagcagcaacagtcacaccagcagcaacagccaagccagcagcaacatttgcagctgccgcaTCCGCTGCcatgccagcaacaactgcaacctCTGccatgccagcagcaacatcggTCGCatctgccacagcagcaacagtcacgCCAGCAACTGGCCTCAGCCGCTACGTCTGCCCGTATTGCAATCTGATTTGTGCCAAGCCCTCGGTCCTGCAGAAGCACATCCGCGCCCACACGAACGAGCGGCCGTACCCCTGCGAGACATGCGGCATTGCCTTCAAGACGAAAAGCAACTTCTACAAGCATTGCCGCTCCCGCTCGCACACGGCGCGCATGCGCGGCCTGGACGTGCCGGCCCACGAGGCGGATGGACTGTCCGACCAGGATGGCGACGGAGatctcagcaacagcagctcggaGCTGTTGAGTGTGGAAATTCTAAGTAGCGCCGATTCGCCATATGATGAGCAGTCGATGGCCTCGCCGACGCCCTCGCCCTCTACGCTGTCGGCGGCGAAGAGCGCGTACCTGCAACAGCCCCCACTGCCGCAGCAcatgcaacagttgccgctgggctcgcctgctgctggcacatTGCCGCCGGCAACAGTCGAGAATTTGCACTCGGCGACCGCGCAGCATCGACAGTCGATTGACTACAAGCCATACAAGCCAAAATTTCACAATGCAGCGCTCTATgcgccaggcagcagcaaggagcaacagcagcagcagcagcagcagcagcaacagcagcaacagcaacagcagcaacaccagcagcagcagcagcagccgttgctgctacagcaacagcaacagaagttGCCGCAGCCTCTGCTCGTGCATCCCACGCTCTCGCCCAGCacgcagctgaagctgaatcTGCACATCAActcgcatcagcagcagctgcagctgcaacaacatcagcagctccagcagcagcagcaacagttgctgctggcagcagctgctgctgcgggcaATGCTGTCGCCCTGCCGCCACCTCCACTGCCCACTTACTACTTGGGGCAGGCGCCATATTACAACCCCACGGCGGCAATGCATCAGCATGCGTTGGCGCTGCAGTATCAGCAACATTatcagttgcagcagcatcagcaacaacatctgcagcagcagcaacagcaacactcgCCACTGCTCAAGGCGCCAgcacagccgcaacagcaacagttgctgccacagcaacaacagcagcagcaaccgcagccgcagcaacagttgctgcctcagccccagcagcagcagcagCAGCTGCCTCGCACTAATAgtcaacaggcaacagcagcagcagcacctgccacgcccacacctgTAGGCAATTTGAGCAGCTTTGCCAGTGGCATGCAAGTGaaTGTGGAAAAGGTGCAGGAACACATTTCGAAATTGATCTCACAGAACGAAGCCATTGTGGAGAATAAGGAAATATTGCTGCAGAAGAAATATCCCAAGCAATTGAATCGTTCGCGCAGCttcaacaacgccaacaacaacaatagtagcagcaacaacagcaacagcagcagcaacaacaacaacagcagccagcagttGGGCGATGCAAAAGTAAATCTAGCACAGAGCATAgtacaaaagcagcagcaacagcaacagcaggtgcaattgcagcagcaacaactacaacaacaacaacaacaacacattcAACAATATCGAGTCATTGAGCCAGTGAATGGATTGCtcaaacgcagcagcagcagcagcactggcaacagcaacaatgcttATGCTAACCTAAAAGCcacgcctcctcctgctgccttgAATGTCAaattgccgccgccgccgccagcMACaatgttgcaattgctgcattATCGCCAGGATCCAGCAATGCCTTTAAACaaactcgagcagcagcaacagcagcagcagcaacaggcgacGCCCGCGCAGCAGCCCTTAAATCTGTCCGCCAAACCAAAGCCAGCAaaggcagcgacaacagcagcagcacctgcaccagcaacagcagcagcaccagcagcaacaacagcagccgcaccagcaactgcagcagcagcagctacaacaacaacgccaacaattgctgccaagccagcagctgttgccacagCCGCTGCAAACAATTCCATTATCAAGAATCTGTTGCTCAACGCGCGTGGGTTGGCCGTGCCCATTGGCGAGGGCGACGACGCCGTCTACTCCTGCCCGATCTGCGCCAACGAGTTCCGCAGCGCCGACGAGCTGAAGCAGCACAACAGCACCTACTGCCAGGACGCCAGCAGCAGTGCGCCCATCAGCCCCGCCTCCTCGCCCAGCAGCAAGTACTTTCGCTCCAACTCCATCTCCTTCAGCCTGCCGGAGCTCAAGTCGCACATGGCCAACTCGAAGAACCCGCTGTCCTTGGCCAAGCTGGCCTGGTCCCAGCTCAAGACGAAGCCGAGCAGCCTGGTGCTGAATCGGCTGAGCGCGGCGCAGTCGCCGGCGCGGACCAGCACGACGGCGACAACGGTTGCTGgcagcagcggtggcagcagcaactatcTGGCAGCCACTGTGGCAGGCAGCAGTGCTAGCAGCAGCactccaacagcaacaattgctagcagcaacagcaacaacagcctgtacagcaacaacatcagcaatcTAACAGCAACGATGgcgggcaacagcaacagccacaatctgccagcaactgttgccgttAGCATCGACGCCAACAACGTTGCCCTGCGCTTCGTGGACGCCCCCTTGCCCTCGCCTGGCCCGCTCCTGGGCAAGACCCCGCTCGTCGACTACGCCGCGCCCCGCAAGGCCGCCGACGCCCAAGTCGTGATCACCAAAATGCACGAGGATCGCCTCGAGAACATCATCAGCGAGAGCTCGGCGAAGCGGCCGAAGCTGAGCAACGACAGCGCCTTTGCGCTGCCcccggcaacagcaacagcagcagcagcagcaacagcaacgggcgtgcagcagcaacagttgatgTTCGGCAACAGCCAGGAGTTGCCTGGATTCAACACGGGCAAGGAGGAGCGTTTGAGACGCTTCACCTCGTCGGGCGGCTCGATGATCCCCATCTCGGAGTGCCCCGAGCTGGACAAGAGCCCCAAGATGATCCGGACTCCGTTGCTGTCAGGCGGCAGCTTTCAGGAAATGTCGCCCCGACTGAGTGACCCCAAGCCGAAGCCCGCATTTCTGctcaatgccagcaacaacaacaacaacatcatcagcaacagcaacagcaacaatagctcGCAGCATTTCCAGTTCCCGCCCATCAACTCGATAACCGCCTTCAATCCGCTCACGCTGCCCGCCATGAGCGAGTCGAGCGGCAAAGCGATTCCCTACGTGCCGGGCATTCCGGGCCCGAGCAGCCTCACATTGCTGCCAgtaccgccgccgccgcaacAGCTGYTGCTGCAGCGTCCGCCCGCCGTCGATGCGCCGCCCTTCAAGAAGTCGCTGTCGCCCTTCGGGGGCGTGCAGAATCTGCCCAGCGAGTTCAGCCGACAGCCGCCGACGCCCGCCCAGCGCAATGCGCTGCAGtggcagagcaacagcagcaacagcggcagcaagctggcagcaactgttgctgctgctggcgacgGCCCGGGCATGCAAAAGTTCAATTTCCTGCGCATGGCTGACAATgtgaaggagcagcagccgcagcaggaggTGCGGCACTTTATATTCGATCCGCTGCATGTGGAAACGCCAGAAAACgaagcgacaacagcaacagcagcagcgacagcagcaacatcaagtgctgcggcaacaacatcagctggagctgcatcAACTGTTGCCAGTAAGACGAAATTCCTGCGTCCCACGAGTCTCCCGCTCAAGCCGGGCACGTTCACGCCCAAGCGCCATCACGGGATCACCCCGACTGCGAATACCCTGCCGCTGATCTCGCCCGAGACGCCGCGCCCGTCCAAGTCGTGCGTGCAGCTCTACCTGAACGGCCACGCCTACACCTACCTGGGCCTCAAGTGCAGCACCAAGATGTTCTACTGCACAGTGAACTGCCCGCAGCCCTCGTACGTGGCCGGCATGCACAAGCTGTCGATGTACAGCGTCTGGCAGGTGTGCGAGGAGAACCAGCCGCACCCGCTCGGCCTCAAGCCGAAGCAGGTGATGTCGCTCTACGACTCCAGGCAGAAGATGTTCGGCGCGGGCTTCACGGTGGTCCAGGCGGGCGCCAATGCGCACAGCTACGCGCTCGTCGGCTCCCAGCAGACgatcagcagctgctccaccgTGAACAACGCCCAGAGCAAGTTCTACCAGCACCAGGCGAAGCAGGCGCCAGCCATCGGGGCGCTCAGCGAGGCGAATGTGGCGGCCAAGGCGAGCGAGGAGGCAGCCAAGAAGCTGGAGTCCGGCCAGCTGCTGGTGGGCGGCTATGAGTCGAACGAGGACTACACCTACATACGCGGACGTGGACGTGGCCGCTACGTCTGCTCCGAGTGCGGCATTCGCTGCAAGAAGCCCTCCATGCTGAAGAAGCACATTCGCACGCACACGGACGTGCGTCCGTTCACCTGCAGCCACTGCAGCTTCAGCTTCAAGACCAAGGGCAACCTGACCAAGCACATGCAATCGAAGACGCACTTCAAGAAATGCATTGAGCTGGGCATCAATCCAGGCCCAATGCCAGCGGATGGCGAATTCCTGGACGTGGACGTGGAGTTCGATCAGCAATCCTCGACCTCGGCTGGCGGACGCACTTCCTCCATGGCCGGCGACTCTGCAGATTCGGATGATTATAGCGACAACGAATCGGAGAGCAGCGACACAGACGAATCCAAGTCCCGCCTGAAGGAGCATGAGGCTGCGCGCGGCCTGCTCTCGCTGTCGATGACGCCGCCCATACCGCAGAGTGTCTCGCCCTATCCCGCGCAGCTGGAGACTAGCATGTCCGCAGCGAGTCCAGCGAACAGCATTGGCTCGGCGGGCGGTGCTTCCACGCAGCCCAAGCGGCAGGTGTGCTCCTTCACGTCGCCCAAGCCGCCGTTTGACTACCAGAAGCAGGAGCAATACTACTCCAATCCCGAGGAGTCGAAGCCCAAGCGCCAAGTGCCGACGGATGAGAGCAGTGCGCCAATGGACTTGACTAAGCCGAGGCCAATCAcctcggcagcagcaggagcagcagcaacggcagcaacatcatcagcggcagctgcagcggcaacagttgctgccatgGAACTGCCCAAGTCGCAGGCACAGCAGATGCGCGATGTCATCTTCGGTGCGGGCAACAACGAGTGTGGCTTCATGAAGACTTTGATCTCGGTGTCGGACAAGGTGCGAATCTCGGCCGAGATGGAGGAGCAGGCGAAGCGCGAGAACGGGGGCGAGGATGTGCTGCTGCACACGTACATCAAGGAGCAGGCGCTGCACAACGCCAAGCGCAAGCAGAGCTtgtacaacagcagcagctacctgACGacaaccaccaccagcagcagcatcagcaacagcagcagcaccactaccagcagcagcagcatgcccATTGTgagcagcagtcagcagaggGTTGGCTTGATATATCACGAGCTGCCCAGCATCGAGGTGCACGAGCCGGAGTCAACGGAGCTGGGAGAGCTagagaaggagcaggagcaaatggagcagcagcagcagcaacagttgaaaGCAATTGCTGTGAGCAGCCAGGATAAGCAATCCGaagagcgacagcagcaggcaacagcaactgtcccagctgctgctcctgctcctgctcctgctgcagccacGCACAATGCCAACTTGCcagctgcagtgcagcagccaGACGCCATCGACTTCAAGGGCGTgctgagcaacagcaacaacacgaagCCCATtgtgacaacagcaacggcaactgttgccgccgcctcagcaacagctacagctatagtCAAGGTGTTGGCCACAGAGGAGGGCTACAACAAGCCGAGCAGCGagccggcaacagcaacagctgctgccacagcaacaactgcagccaccccgacaacaacaacagccagcggcagcagcagctacgccGGGCGAGTGGTgccagcgccgccgccgcccattGCCAGCGATGCGCGCCCCACGTGCCTGCTGTGCAGCAAGACGTTccagcggcagcatcagctgaCGCTGCACATGAACATCCACTACATGGAGCGCAAGTTCAAGTGCGAGCCGTGCAGCATCTCGTTCCGCACGCAGGGCCATCTGCAGAAGCATGAGCGCTCCGAGGCGCACCGCAACAAGGTGATGATGACGTCCACCTTCGGCGTGCCGACCACGTCGAATCCGCGCCCGTTCGAGTGCACGGACTGCAAGATTGCCTTTCGCATACACGGCCACCTGGCCAAGCACCTGCGCTCGAAGACGCACGTCCAGAAGCTGGAGTGCCTGCAGAAGCTGCCCTTCGGCACGTATGCGGAGATCGAGCGGGCGGGCATCAGCCTGACGGAGATCGATACGAGCGACTGCGAGAACTCGCTGATCTCGCTCAAGCTGCTGGCCCAGAAGCTGCTCGAGAAGGACCCCAACAAGCTCAGTGGCTACACGACGCCGTCGGgcatgctgcagctggtgggcggcggcggcagcggcagcggcagcgagaTGCCAGCTGCCAACCAGGACAGCGCCTCGGAGGACGGCTTCAGCGCGGCGAACAGCGCCGCGGCCTCGGCCATCGCCTCGCTGGACAACGACAGCGCCGGCAACACGCCGCAGCGCGCCAGCTCCATGTCCGAGGACGAGACGAACGGCCTGACCAACGGGCTGAGCCTGAAGCGCCGCCTGCCCGccagcagcttcagcagcagcaacggcgacgAGAGCGACAATCCGCTGGAGACGAGCGAGAAGCGCGCGAGGAGCAACACGAATGAGTTGACTCTGCCCATTGCCGGCAGCAACtga
- Protein Sequence
- MARRKGSGRGKSTVNSRKNTLESTREKLKDEPTAANTSQASKFDETMESAATTTATATNTAKQHYKTANKQYKTNNNNNSINNSNNNKVSNTRRATAAAAAAAAAAAQATTTTTTAATATTKKQTYRSSNTTAATTATTTTLKTNNNNNKVKATTATSEANEATEATEATEATAIDNNKSKRDNLSELPAKIADSNSSSSSNTSNNNNNNNSDNSISENNYEFKARDKANVSDSKMTLQHSSNTTTTTNSNNNNNNNISISSGSGSSTNNNDAAAATATAIADWKSSSNNLRYLHKKFKRLASTTETEAPDEPTLRTTSLSSNSSVSPPTQLPLVNGHEHSNSNSISNSNSNSHETESYSKNAAVAVAGVPRTRTPLSNSSNINISSSSSSNYASNATLSPATFAQHQQQTQPTTTAAATVTPAATAKPAATFAAAASAAMPATTATSAMPAATSVASATAATVTPATGLSRYVCPYCNLICAKPSVLQKHIRAHTNERPYPCETCGIAFKTKSNFYKHCRSRSHTARMRGLDVPAHEADGLSDQDGDGDLSNSSSELLSVEILSSADSPYDEQSMASPTPSPSTLSAAKSAYLQQPPLPQHMQQLPLGSPAAGTLPPATVENLHSATAQHRQSIDYKPYKPKFHNAALYAPGSSKEQQQQQQQQQQQQQQQQQQHQQQQQQPLLLQQQQQKLPQPLLVHPTLSPSTQLKLNLHINSHQQQLQLQQHQQLQQQQQQLLLAAAAAAGNAVALPPPPLPTYYLGQAPYYNPTAAMHQHALALQYQQHYQLQQHQQQHLQQQQQQHSPLLKAPAQPQQQQLLPQQQQQQQPQPQQQLLPQPQQQQQQLPRTNSQQATAAAAPATPTPVGNLSSFASGMQVNVEKVQEHISKLISQNEAIVENKEILLQKKYPKQLNRSRSFNNANNNNSSSNNSNSSSNNNNSSQQLGDAKVNLAQSIVQKQQQQQQQVQLQQQQLQQQQQQHIQQYRVIEPVNGLLKRSSSSSTGNSNNAYANLKATPPPAALNVKLPPPPPATMLQLLHYRQDPAMPLNKLEQQQQQQQQQATPAQQPLNLSAKPKPAKAATTAAAPAPATAAAPAATTAAAPATAAAAATTTTPTIAAKPAAVATAAANNSIIKNLLLNARGLAVPIGEGDDAVYSCPICANEFRSADELKQHNSTYCQDASSSAPISPASSPSSKYFRSNSISFSLPELKSHMANSKNPLSLAKLAWSQLKTKPSSLVLNRLSAAQSPARTSTTATTVAGSSGGSSNYLAATVAGSSASSSTPTATIASSNSNNSLYSNNISNLTATMAGNSNSHNLPATVAVSIDANNVALRFVDAPLPSPGPLLGKTPLVDYAAPRKAADAQVVITKMHEDRLENIISESSAKRPKLSNDSAFALPPATATAAAAATATGVQQQQLMFGNSQELPGFNTGKEERLRRFTSSGGSMIPISECPELDKSPKMIRTPLLSGGSFQEMSPRLSDPKPKPAFLLNASNNNNNIISNSNSNNSSQHFQFPPINSITAFNPLTLPAMSESSGKAIPYVPGIPGPSSLTLLPVPPPPQQLLLQRPPAVDAPPFKKSLSPFGGVQNLPSEFSRQPPTPAQRNALQWQSNSSNSGSKLAATVAAAGDGPGMQKFNFLRMADNVKEQQPQQEVRHFIFDPLHVETPENEATTATAAATAATSSAAATTSAGAASTVASKTKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGLKPKQVMSLYDSRQKMFGAGFTVVQAGANAHSYALVGSQQTISSCSTVNNAQSKFYQHQAKQAPAIGALSEANVAAKASEEAAKKLESGQLLVGGYESNEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCSFSFKTKGNLTKHMQSKTHFKKCIELGINPGPMPADGEFLDVDVEFDQQSSTSAGGRTSSMAGDSADSDDYSDNESESSDTDESKSRLKEHEAARGLLSLSMTPPIPQSVSPYPAQLETSMSAASPANSIGSAGGASTQPKRQVCSFTSPKPPFDYQKQEQYYSNPEESKPKRQVPTDESSAPMDLTKPRPITSAAAGAAATAATSSAAAAAATVAAMELPKSQAQQMRDVIFGAGNNECGFMKTLISVSDKVRISAEMEEQAKRENGGEDVLLHTYIKEQALHNAKRKQSLYNSSSYLTTTTTSSSISNSSSTTTSSSSMPIVSSSQQRVGLIYHELPSIEVHEPESTELGELEKEQEQMEQQQQQQLKAIAVSSQDKQSEERQQQATATVPAAAPAPAPAAATHNANLPAAVQQPDAIDFKGVLSNSNNTKPIVTTATATVAAASATATAIVKVLATEEGYNKPSSEPATATAAATATTAATPTTTTASGSSSYAGRVVPAPPPPIASDARPTCLLCSKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHRNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCENSLISLKLLAQKLLEKDPNKLSGYTTPSGMLQLVGGGGSGSGSEMPAANQDSASEDGFSAANSAAASAIASLDNDSAGNTPQRASSMSEDETNGLTNGLSLKRRLPASSFSSSNGDESDNPLETSEKRARSNTNELTLPIAGSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00510052;
- 90% Identity
- -
- 80% Identity
- -