Basic Information

Gene Symbol
ATFC
Assembly
GCA_001654025.1
Location
NW:10534262-10546423[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3 2.5e+03 -2.0 1.2 31 56 162 187 160 189 0.76
2 2 6.4e-11 4.8e-08 32.3 14.2 2 63 315 376 314 378 0.95

Sequence Information

Coding Sequence
ATGACCACCTTCATCAGCAGCAAAATACCATTGACAATGGAGAGTTTGGATTTACCGCAAGAACTTTACTGGGATCCCAAGATGGAGCCAGTTTCGCCACCATCAATGGGCGGCGAGCTGTTTCCGCTTGACGATCCAACCTTTCTCTATGACGATAACTTTGCGAATGgCATTACACTCTTAAGCGTGGAGGCGGCCGACGCCTTGGTGACGTCGGCAAGTTTAGAGCTGCTCAACAATGAAGATTTCGTTGTGGAATTCATGGATCTGAAGGATGAAGagTGCCTGCTAGACCAGAAGGCGTCGCACTACATTGACTATGAAACATCGACCTTTCCCCAACATCTCGATGTGGAGCAGCAGGACGTGCTGCCCGTAACCAAAGTGCAGGAGGCGAGTGCAGCAAATGCCAGCGACTTTCAACATGCTGATGCGTCGATGATCTTACAGCAATTGACGCCGCCGCAATCGCCGCCACAATTCGAGGCCCAgctccaacaacagcagccgcaggagGAGCCTATTAAGCAGGAGTCGAAGCAGCTACAATATGCCACGGACGctataccaacaacaacaccagctgGCGGAGCCTATGGCTTCAACAACTGGCTGCCCGTGAACGAGATCATACGGGAAACCCAGCTCGTCGACGATATTGTCAACATGCGCGcccaggagctgcagctgcccatCAACTGGCAGCAATACAACGATGACTGCGAATCGCAGGCATCCTCCacaatgtgcagcagcagcagcagcagcagcagcagcagcagtagcagcagcagtagccccagtccgagcagcagcattgcTGATGCGGATGAGGATTGGCtgccgggcagcagcagcagctcgcccACTCACACCAACGGCGAGGAGCAGCTGTCAACCAAGGGGGCCAAAAAGCGCACGCGCACCTATGGACGCGGCATCGAGGATCGCAAGATTCGTAAAAAGGAGCAGAACAAAAATGCGGCCACACGCTATCGCCAGAAGAAGAAACAGGAAATGGAGCACGTCCTCGGCGAGGAGCAGGAACTGCAGCAGACTAATGCACAACTGCGCCGCCAGCTAACCGATCGTCTCAATGAATCGCGTTATCTGCGCCAGCTCATCCGCGAGTTCTACAAGGATCGCAAGCAATAG
Protein Sequence
MTTFISSKIPLTMESLDLPQELYWDPKMEPVSPPSMGGELFPLDDPTFLYDDNFANGITLLSVEAADALVTSASLELLNNEDFVVEFMDLKDEECLLDQKASHYIDYETSTFPQHLDVEQQDVLPVTKVQEASAANASDFQHADASMILQQLTPPQSPPQFEAQLQQQQPQEEPIKQESKQLQYATDAIPTTTPAGGAYGFNNWLPVNEIIRETQLVDDIVNMRAQELQLPINWQQYNDDCESQASSTMCSSSSSSSSSSSSSSSSPSPSSSIADADEDWLPGSSSSSPTHTNGEEQLSTKGAKKRTRTYGRGIEDRKIRKKEQNKNAATRYRQKKKQEMEHVLGEEQELQQTNAQLRRQLTDRLNESRYLRQLIREFYKDRKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00573074;
90% Identity
iTF_00472822;
80% Identity
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