Basic Information

Insect: Drosophila arawakana
Gene Symbol: -
Assembly: GCA_018151165.1
Location: JAECWX010000031.1:1130445-1135329[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 7.3 4.2e+02 1.6 0.1 1 9 72 80 72 84 0.91

2 15 0.0017 0.096 13.0 0.5 1 23 144 166 144 166 0.98

3 15 0.00013 0.0074 16.5 1.6 1 23 397 419 397 419 0.98

4 15 1.3 76 3.9 0.5 1 23 425 448 425 448 0.89

5 15 1 58 4.3 2.2 1 23 474 497 474 497 0.93

6 15 0.0013 0.073 13.4 1.9 3 23 779 799 778 799 0.92

7 15 0.051 2.9 8.4 1.4 1 23 805 828 805 828 0.98

8 15 4.6 2.6e+02 2.2 3.6 2 23 865 886 864 887 0.93

9 15 0.0049 0.28 11.6 0.4 1 23 908 931 908 931 0.97

10 15 0.024 1.4 9.4 0.9 1 22 1128 1149 1128 1151 0.89

11 15 8.7e-05 0.005 17.1 2.8 1 23 1164 1186 1164 1186 0.98

12 15 0.43 25 5.5 0.2 2 21 1192 1211 1192 1214 0.89

13 15 0.00051 0.029 14.6 4.1 2 23 1221 1245 1220 1245 0.89

14 15 0.003 0.18 12.2 0.2 1 23 1250 1272 1250 1272 0.98

15 15 0.00078 0.045 14.1 1.9 1 23 1278 1301 1278 1301 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	7.3	4.2e+02	1.6	0.1	1	9	72	80	72	84	0.91
2	15	0.0017	0.096	13.0	0.5	1	23	144	166	144	166	0.98
3	15	0.00013	0.0074	16.5	1.6	1	23	397	419	397	419	0.98
4	15	1.3	76	3.9	0.5	1	23	425	448	425	448	0.89
5	15	1	58	4.3	2.2	1	23	474	497	474	497	0.93
6	15	0.0013	0.073	13.4	1.9	3	23	779	799	778	799	0.92
7	15	0.051	2.9	8.4	1.4	1	23	805	828	805	828	0.98
8	15	4.6	2.6e+02	2.2	3.6	2	23	865	886	864	887	0.93
9	15	0.0049	0.28	11.6	0.4	1	23	908	931	908	931	0.97
10	15	0.024	1.4	9.4	0.9	1	22	1128	1149	1128	1151	0.89
11	15	8.7e-05	0.005	17.1	2.8	1	23	1164	1186	1164	1186	0.98
12	15	0.43	25	5.5	0.2	2	21	1192	1211	1192	1214	0.89
13	15	0.00051	0.029	14.6	4.1	2	23	1221	1245	1220	1245	0.89
14	15	0.003	0.18	12.2	0.2	1	23	1250	1272	1250	1272	0.98
15	15	0.00078	0.045	14.1	1.9	1	23	1278	1301	1278	1301	0.97

Sequence Information

Coding Sequence: ATGACGAGAAAGCTAGTATACGCCGATGAGATGGAGATGAATTATAAATTTTCCTGTCGATGTTGCCTGAAATCCGAAGCAGAATTCTTTAATCTGGACTACCTTACGGACGGAGTCATAGGCGACAGTGAAAATGTTACCCATACAAAAATACCACTTATGCGTTTGTTATTGTTTTGTATTCGCACGGAAAATGTACCCGAGCTACCGCAATACATTTGCAAGGAGTGCAGCAAAAGCTTGCAAATCGCATATTTCTTTATACAGAACAGTCTCAGGGCACACGAGATTCTATGCCGGAAACTGTGCCCTGGAAAGCTGAAAACTACAACACGGTTCAATGGTCAAAAAGTCATTGAACCAAACCGAGATGACACAACTGTAGAGAAAAAAGTGGTGAAACCAAAGCCTGTCCGTGCCGCCGTGCGCCACGAATGCAAAGTATGCGGTGCTATAATCTACGATCGGATGGAACTCAAGACACACATTCGCAAGCACACAATGGCAGCAAGACATCCATGTAAATTATGCAAATTTGTGACGCTTAAGCAGCATCAGCTTCCGGAGCATTACAGAAAAGTTCACAACTTAACGGCTCTTCAGATTGATCAGCAACTTAAAATTCAAAGGTCTGTGCAGGCGGCTGTAGCTGCTGCTGCGGTCACAACGACGACCAAATCAGCACCAATTGTGGATGATAGCGAGCAAATTAAGGTTTGTACATTGGAAGACATGGAACTACTGATACCCATGGTGCTAAAACCGGAGGATTTTACACATCCCCAATTGGATGCAGATCAACTGCGTGATATTGAACAGCAATTGGTGGATTCGTTAAATGTAGATCAACCTGTGTCAGATTTGAACTCCTCTCTGATGCCAGCGGAGCCAACGATACCACCGGAAAGCAGGGGAAATATGAGCATAGGTACGGAGTTCTTGGTCATGCCCGATGGCTCGTTACAACAAGTCAGCGATGGCGGCGTTGTTTTTGAGTACATCGATGACAGTAAAAGTAAACTAGCGACAAGCAATATGAGTCTACAAAACTTATTGGAAGATTCCAAATCAGAAGTGTCCTGTACTGCAATGGATATGGATGTAAACCACCTGTTAGACAATGTGGTGCCGCAAATAACTGCGAAACCCCCGCCAAGACCAGGTCCAGGATCTATAGCTGCACTTAAGCACAAATGTAAACAATGCCCTAAAGCATTTCCGACTGTAGCTCGCCTAAAATCACACCAGCTAACACACAGTCATTTACCAAAATTCTATTGTGATCAGTGTTCCTACTACTCGCTGCGCAGCTCCGATCTCATTCAGCACCAAGTAGAGGAGCACAACGTTTCCATCGACGATAATTCAATTCAACTCGAAAAATCTTCGCTGGCTTTGGCGACAGATCGGAGTCGTTTATATTGTTGTGACATGTGTTTATATGAGGCACCAACCAGCTTTCAGCTACAAAAACACTACAGCGAAAAGCACCTCATACGGCCCAATGAGGTTCAGTTGCGTCCCAGCTGGATTAATGAGTCCAAGGACAGGGTCGCAGGCATATCTACGTTGGTTGGAAATTCACAGAAGAGTCCGAATATTCCGTTGGGTATTACATATCCACTGAAATCGTCGGCTGTAGCAGCAGCTGAGGCAATGGCTGAGATCAACGAGTCAGTGCAGCTACATCCACCCCCGCAGGCAACAACAACAGCTGTAGTGACCCCTGCTGGTGATTTAAATGTGGTTGTAGATGCAACCTCGTTGTTTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTCAATGTTTCCAGAGCAATCCTTTGCCACAACAACAACAACAATGAATGAAGTATCCAGTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGACAGAAAATCCCAACGCCAACATCTTTGGAGATATGCGAGATTTTATTGATGACACAGATGTGGCAGCTATTTGTACCATACCCGCCGACGATATGCCTGTCGTCGATGGCGATGACATTGTTATCGAAAACAATATGAGCTTGGACTTTGATGCTGAAAATCTATTTGAGGATTTTGAAGAAGATGTCGAAGTCGGCGAAGAAGATGACGACGATGAAGACGCCGAAAACGATGATGAGAATGATAATAATGATGCGGCAACTGATCAAAACTTATTGCTAACCAGTGATGATGATGACGTGGATGACTTTGATGATGAACAATCGAAGCATCTGCAGAAACCATATTGCATCTATTGCAACAAAAAGTTTACGAGCCAATACAAGTTCGAGAACCATATGTTTGTACATCGCGGGTTGGCGCCATATCGCTGTGAGCTCTGCACGAATCTGTATAATATGAAGCGTCTGCTCATTCGGCATTATAAAACTGTGCACAAGCGAATGCCGACGCGGGACATGGTGCAGGCCAAAGGCGATAAGATCTTGGTGGAGTCTACTGCAATAGAAAAGCTGAATCATAACGCTGATAAACCTCCCATGCTTATGTGTGCAAAATGTCCATTTGAATGCGAGCATGACGAAGACATGCGAAAGCATTTAAATGCCCATCATGGCATAAACGATGGTGTTTCTATGCACGCCAATGAGGTGTTTATTATTCGCAAACTGCCTTATGAGTGTCCACGATGCATTCGCTCGTTTGCAGCCAAACGGACGCTGATTCGACACTTGCAGCGAAGCCATTTGGTGGACACTATTATTGAGATGCAGACAAACAGCTCAACGGCAACAAGTACAACGCCAAAGAATGCTAACGCCAGCGACGGCAATAAAGCACCTGATGTGGCACAGGAGTCCAACATGATGGATGGCAATGATGACAACATGGAATGTGAAGATAACTTGGTAAACAATGACACAGGATTAAGTACGGATGATGGAGGCACAGTCGCAAAATCATTGATTACAGCGAGCACACCAAAAGTTATGACAAAATCAGAAGCAGCAGCAGCGTCATTTGATGGGTCATCTTTAACAACAGCAGTTGCAGCACCAGCTGCATATTCTACTCTTACAACAACAACAATAGATGAAACAGCCACCACAACAGCAATAGAGACCACACTATTTCCAACGCCAACGCCGTTTGATTTTGATCTGGATTTTATTGGCAACGGAACACATAACACTTCACTCAAAACCAACAATGATAACTTCAATGTAATTCCAAGTCCGCGTCAAATTTTAAACGGCAGCGACAAGCTTTTGACAGCTGCCTTAGAGCCGTCGCCAATTAAAGACCTGCGTCCAAGGTTGCCACGTACCCCAATATTTGTATGCAAGCAGTGTAACCAGACATTTGATGAACTGGATAAATTGGTGCAACACGAGTTCCAGCAACACTCGAGTGATACTGTGTCGCCTCAAAGCACTTATCAGCATCAGTGCGACATCTGCAGCACGTCATATAGAACAGCGACACTTCTAAATTATCATATGAAACGGCATGCAACTCGTAAGGCTCAGTGCAAACAGTGCTCGATGGAATTTGTAAGTCATGCGGAGATGGAGCTGCACGTGGTGGCCGAGCACGGCGCAAGGATACCCCTCAAATGTGGAATCAATGGTTGCAATAAGACATTCAACTACAAACATCATCTAAAGCGTCATCAAACCGCTTCTCATACCCCAGTTCAGTATATATGTCCCGAATGTGGCGTCCATTTGATGTCCAGTCTGCTACTAAGAGCTCACATGTATACCCACAAGAGTCCACACACATACAAGTGCCCGAAGTGTGTTCGAACTTATATGCGACGCAACGCTTTTCGTAAACACGTTCAACGTGAACACGACTGGGATGCGACTGATGAGGAAATAAATAAAACATATTTTCTTAATGACATTACATCACGCACGAAAGATAAAGGAAGACACGATGATATGCGAGAGTTAAGATCGCTTAAAGTTGAATACGAGCAGTCGGAACAATCATTTGACGCATCAAGTTAA
Protein Sequence: MTRKLVYADEMEMNYKFSCRCCLKSEAEFFNLDYLTDGVIGDSENVTHTKIPLMRLLLFCIRTENVPELPQYICKECSKSLQIAYFFIQNSLRAHEILCRKLCPGKLKTTTRFNGQKVIEPNRDDTTVEKKVVKPKPVRAAVRHECKVCGAIIYDRMELKTHIRKHTMAARHPCKLCKFVTLKQHQLPEHYRKVHNLTALQIDQQLKIQRSVQAAVAAAAVTTTTKSAPIVDDSEQIKVCTLEDMELLIPMVLKPEDFTHPQLDADQLRDIEQQLVDSLNVDQPVSDLNSSLMPAEPTIPPESRGNMSIGTEFLVMPDGSLQQVSDGGVVFEYIDDSKSKLATSNMSLQNLLEDSKSEVSCTAMDMDVNHLLDNVVPQITAKPPPRPGPGSIAALKHKCKQCPKAFPTVARLKSHQLTHSHLPKFYCDQCSYYSLRSSDLIQHQVEEHNVSIDDNSIQLEKSSLALATDRSRLYCCDMCLYEAPTSFQLQKHYSEKHLIRPNEVQLRPSWINESKDRVAGISTLVGNSQKSPNIPLGITYPLKSSAVAAAEAMAEINESVQLHPPPQATTTAVVTPAGDLNVVVDATSLFYXXXXXXXXXXXXXXXXXXXXXXXXXXFSMFPEQSFATTTTTMNEVSSGXXXXXXXXXXXXXXXXXXXXXXSTENPNANIFGDMRDFIDDTDVAAICTIPADDMPVVDGDDIVIENNMSLDFDAENLFEDFEEDVEVGEEDDDDEDAENDDENDNNDAATDQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKILVESTAIEKLNHNADKPPMLMCAKCPFECEHDEDMRKHLNAHHGINDGVSMHANEVFIIRKLPYECPRCIRSFAAKRTLIRHLQRSHLVDTIIEMQTNSSTATSTTPKNANASDGNKAPDVAQESNMMDGNDDNMECEDNLVNNDTGLSTDDGGTVAKSLITASTPKVMTKSEAAAASFDGSSLTTAVAAPAAYSTLTTTTIDETATTTAIETTLFPTPTPFDFDLDFIGNGTHNTSLKTNNDNFNVIPSPRQILNGSDKLLTAALEPSPIKDLRPRLPRTPIFVCKQCNQTFDELDKLVQHEFQQHSSDTVSPQSTYQHQCDICSTSYRTATLLNYHMKRHATRKAQCKQCSMEFVSHAEMELHVVAEHGARIPLKCGINGCNKTFNYKHHLKRHQTASHTPVQYICPECGVHLMSSLLLRAHMYTHKSPHTYKCPKCVRTYMRRNAFRKHVQREHDWDATDEEINKTYFLNDITSRTKDKGRHDDMRELRSLKVEYEQSEQSFDASS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00471148; iTF_00569238;
90% Identity: -
80% Identity: -