Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_018151165.1
Location
JAECWX010000532.1:1908270-1909954[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4 4.5e+03 -2.3 0.1 4 17 20 32 18 39 0.57
2 3 1.4e-07 0.00016 21.5 0.0 4 38 301 338 298 339 0.86
3 3 2.6e-09 3e-06 27.1 0.3 3 43 394 439 392 441 0.87

Sequence Information

Coding Sequence
ATGATGCTGCCATCAATGGTGCTTGGCCTGTTGCTGCTATGTGGCACGACCCAAGCCTGGCACTCCGAGGAACTGGAGATATTCGATCTGGTCGAAGAGATCAACAAAAACTTTTACGAATTCATGGGCATTAATCAGACTGCCACGAATAATGAAATAAAACGAGCATTTCGCACACTCTCGATTGTGCTGCATCCGGACAAGAATCCCTCCGAAGATGCCAACATACAGTTCCGCAATCTAGTCTCCATCTACGAGGTACTCAAGGATCCGTCCAAGCGTGAAAAATACGACAAAGTTCTCCGCGATGGCATGCCCAACTGGAAGTCAGCCCTGTACTATTATCGTCGAATGAGAAAGATTGGATTGTATGAGGGTGCCTTTATACTGTTCCTAATCATTACCGTGGGCCAGTATCTGTTCGCATGGGCCGCCTATCTGGAGAAGAAGTATACGGCGGAACAGGTCTTTGGCACGAAACTAAAGAAGCTACAGAAGCGTAACAAGAATCTGGACATGGATGTGATACTCAGTGAGATACCCATACCATCGCTGCTCAACACGCTGCCCATACAAATACCTTTGGCCATTTGGAATCTGCCCAAGACCATTAAGAATGCATTTAGCAAGGCCAACGAGCTCAAGGATTTGGCGCTGGAGAAGCGCAGACAGGAACTGGAAGCGGCACGCCGCCAGGAGGAGCTGGAGAAGGAGGCCGAGGAGCAGGTGCGTCTGCGTAAGGAGCACAAGGAGAATCTACGCAAGCGCAAGCAGAACACAAAGGCGCCGGAGAAGACCGCGGAGGAGCTGCGTGGTTACTCCAAGATACAGTCACGTGAGCTGACGGAGGAGGATGCCATACGACCGGCTTCCCAAAAGAGCACGGTTAGCGGTGGCTTCTGGACCGACGAGGATCTGACGGAACTGATACGACTGGTTAAGAAGTATCCTGGTGGTGCGGGAAGCCGTTGGAATACCATAGCCGAGTCCATGAATCGTTCCGTCCAAGAGGTCACATTTATGGCGGCCAAGATGAAGGAGAATGGCTATCGCATACCCGGGCAATCCGAGAGTGTTGCCGAGAATCTTGTGCAGGAGTCACAGCAGGCGGTGCGCAAGGAGAAGAGCAAAAAGGGCGCCGGCCTGGCCAGTGAGAAGAGCATGCTCATTCCAGAGACGAACTGGACACAGGAGCAGCAGCGTGCCCTGGAGGCGGCTATAGTTAAATACCGCAAGAATGCTGGCGGAGATCGTTGGCAAAAGATAGCCAATAGTGTGCCGGAGAAGACCAAGGAGGAGTGTCTGGTGCGCTACAAGTACTTGTGCGAGCTGGTCAAGACGCAGAAGAAGGCCGAGGAGGAGGGCGAGGGCGAGGAAGAGCTGGCCGATGATGACTCAGCGGCAGTGCCTACAGCGGTAGCGGTGGCGGAGCAACCAACGGAGGAGGAGGCTGCTCCTGCTCCCGCTCTGGCGCCAGCCAAAAAGCTAAGCAAACGCGAGCAGCGACGACGCAAACGGGATTTGTCCAGCGACGAGGATTCCGATGATGCATATCAGTACGAGAATAGTTAA
Protein Sequence
MMLPSMVLGLLLLCGTTQAWHSEELEIFDLVEEINKNFYEFMGINQTATNNEIKRAFRTLSIVLHPDKNPSEDANIQFRNLVSIYEVLKDPSKREKYDKVLRDGMPNWKSALYYYRRMRKIGLYEGAFILFLIITVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKRNKNLDMDVILSEIPIPSLLNTLPIQIPLAIWNLPKTIKNAFSKANELKDLALEKRRQELEAARRQEELEKEAEEQVRLRKEHKENLRKRKQNTKAPEKTAEELRGYSKIQSRELTEEDAIRPASQKSTVSGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRSVQEVTFMAAKMKENGYRIPGQSESVAENLVQESQQAVRKEKSKKGAGLASEKSMLIPETNWTQEQQRALEAAIVKYRKNAGGDRWQKIANSVPEKTKEECLVRYKYLCELVKTQKKAEEEGEGEEELADDDSAAVPTAVAVAEQPTEEEAAPAPALAPAKKLSKREQRRRKRDLSSDEDSDDAYQYENS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00616831;
90% Identity
iTF_00557840;
80% Identity
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