Basic Information

Insect: Drosophila anomalata
Gene Symbol: -
Assembly: GCA_035046425.1
Location: JAWNNY010002265.1:609104-616124[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1e-07 8.9e-06 26.1 1.8 2 23 165 186 165 186 0.97

2 9 2.6e-07 2.3e-05 24.8 1.6 1 23 192 214 192 214 0.98

3 9 1.2e-07 1e-05 25.8 1.1 1 23 220 242 220 242 0.98

4 9 7.4e-07 6.3e-05 23.4 0.7 1 23 248 272 248 273 0.95

5 9 4.4e-05 0.0038 17.8 3.1 1 23 278 300 278 300 0.97

6 9 0.0004 0.035 14.8 3.3 1 23 306 329 306 329 0.98

7 9 0.00049 0.042 14.5 1.3 1 23 335 357 335 357 0.98

8 9 3e-06 0.00025 21.5 0.8 1 23 362 384 362 384 0.99

9 9 0.00098 0.084 13.5 0.5 2 23 391 415 390 415 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1e-07	8.9e-06	26.1	1.8	2	23	165	186	165	186	0.97
2	9	2.6e-07	2.3e-05	24.8	1.6	1	23	192	214	192	214	0.98
3	9	1.2e-07	1e-05	25.8	1.1	1	23	220	242	220	242	0.98
4	9	7.4e-07	6.3e-05	23.4	0.7	1	23	248	272	248	273	0.95
5	9	4.4e-05	0.0038	17.8	3.1	1	23	278	300	278	300	0.97
6	9	0.0004	0.035	14.8	3.3	1	23	306	329	306	329	0.98
7	9	0.00049	0.042	14.5	1.3	1	23	335	357	335	357	0.98
8	9	3e-06	0.00025	21.5	0.8	1	23	362	384	362	384	0.99
9	9	0.00098	0.084	13.5	0.5	2	23	391	415	390	415	0.95

Sequence Information

Coding Sequence: ATGGACACCATCTGTAGATTGTGCTTCCAAACGGCAACGCTATTCCAGGTGCCCGGCTACAGCATACCCACATGCGTCCGCTGCTCAGAACAGCTAACAAATAATTCCAACTTTCATCAATCGGTGGCAGCCAGCGCCGGTGggggtggcggcggcggtggggCCGGTGGCGTCGTCGGCGGCGGTGGATCCGCTGCAGCAGCATCGgcagcagctgctgttgctgccgcctCTGCCTCCgcagccgctgctgctgctgctgccgcggcCGCTGCGGCATCCTCGTCCACGGCATCCTCCAGCGACAGCGACGCCCACGCGcagcaacatcagcagcaccagcagcagcagcagcagcaacagcagcagcagcagcaacaacagcagcaacaacaacagcagcagcaacaaatgcAATCATCGAGCTCTTCCGAGAATCTGCAGTCCCAGGACGACTCCGAAGATGTGGATCTGATATTCAACGAGGAGGGCTCCTGCCCACTATGCAACAAAACGTTCTCGCGCAAATCCTCGCTCATGACGCACATACGAAATCACTCGGCGGAGCGTAAGTTTGTGTGCACCTACTGCCACAAAGGCTTCACGCAGGCGGCCAATCTGAGGAACCACGAACGCATCCACACCAACGACCGGCCCTACCAGTGCGTCGACTGCGGCAAGACCTTCACGCAGATCACCAACCTGAACAACCACCGCCGCCTCCACACCGGCGAACGTCCGTTTGTCTGCAATGAGCCGGAATGTGGTCGCAGCTTCGCCCAGGTGACGAATCTGAACAATCATATGAAGTCGCACCACAAGGTGCAGCAGTATTGTTGCAACGTTTGCAACAAGAAGTTCACGCAGGTGACATCGCTGAACCAACACCTGCAGGCACATGCCGGAGTGACGGGATACTACTGCCCCCGTTGTCCGGACAAGAACTTTAAGCTGCAGTCCCAGCTGCACACGCACATGAAGACGCACGGATTGGCCTTCCCCTACGAGTGCGGCAAGTGCGACGAGAAGTTCCTGCAGCAGGCGCACCTCGACCAACACCTCAAGATGCACGACGAGTTCAAGTACAAGTGCGACATCTGTCCCAGTAGCTTCAATCAGGAGTCGCTGCTGAAGAAGCACGTCCAGCGGCATGTCGAGGGACGGTACTTGTCCTGCCCGGTGGCCAATTGCACCGAATCGTTCGCCGTGCGCCAGCACCTGTCCAAGCACCTGCTCACCAGCCACTCGCACCACGAACTGCCGCCGCCGAAGCGCTCCAAGAAGACTGTGACTCTCCAGGCGCCCCAACAGCCCCTGGCGATGATCGGCCAGCCTCTATCGCTCCAGCACACGACGGGGCAACGCGGACGTCCGCCGAAAAACAAGAACAAGGCGGCCCTGGCCGCCACGGCCATTAAAATCGAGATCAACGAGCCGCTCCACAGCCAGCATATCATCAGTAACGCCAGCGGCCTCTCCATCCAGCAGCAGATCAGCCAGCACATCCAGCACCAagcgcaacagcagcagcagcagcaacaacaacagcagcagcagcagcaacagcaacagcagcagcaacatctgcACCTGCCGATGGGGCAGGCGGTGAAGGCGCGCTTCATACCCACTAAGTAG
Protein Sequence: MDTICRLCFQTATLFQVPGYSIPTCVRCSEQLTNNSNFHQSVAASAGGGGGGGGAGGVVGGGGSAAAASAAAAVAAASASAAAAAAAAAAAAASSSTASSSDSDAHAQQHQQHQQQQQQQQQQQQQQQQQQQQQQQQMQSSSSSENLQSQDDSEDVDLIFNEEGSCPLCNKTFSRKSSLMTHIRNHSAERKFVCTYCHKGFTQAANLRNHERIHTNDRPYQCVDCGKTFTQITNLNNHRRLHTGERPFVCNEPECGRSFAQVTNLNNHMKSHHKVQQYCCNVCNKKFTQVTSLNQHLQAHAGVTGYYCPRCPDKNFKLQSQLHTHMKTHGLAFPYECGKCDEKFLQQAHLDQHLKMHDEFKYKCDICPSSFNQESLLKKHVQRHVEGRYLSCPVANCTESFAVRQHLSKHLLTSHSHHELPPPKRSKKTVTLQAPQQPLAMIGQPLSLQHTTGQRGRPPKNKNKAALAATAIKIEINEPLHSQHIISNASGLSIQQQISQHIQHQAQQQQQQQQQQQQQQQQQQQQQHLHLPMGQAVKARFIPTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00533229;
90% Identity: iTF_00550386;
80% Identity: -