Danc011459.1
Basic Information
- Insect
- Drosophila anceps
- Gene Symbol
- -
- Assembly
- GCA_035045945.1
- Location
- JAWNON010000190.1:2360275-2363003[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 5.2e-06 0.00037 20.8 3.3 1 23 103 125 103 125 0.98 2 13 0.0035 0.25 11.9 3.8 1 23 131 153 131 153 0.96 3 13 8.2e-05 0.0058 17.1 2.3 1 23 159 181 159 181 0.98 4 13 5.5e-05 0.0039 17.6 0.3 2 23 201 222 200 222 0.97 5 13 0.00021 0.015 15.8 5.4 1 23 228 250 228 250 0.97 6 13 0.069 4.9 7.9 3.3 1 21 256 276 256 277 0.94 7 13 0.006 0.42 11.2 0.9 1 21 422 442 422 442 0.95 8 13 0.00029 0.021 15.3 1.8 1 23 457 479 457 479 0.98 9 13 0.0057 0.4 11.3 3.9 1 23 498 520 498 520 0.98 10 13 0.0017 0.12 12.9 3.0 1 23 530 552 530 552 0.98 11 13 0.00051 0.036 14.6 3.5 2 23 559 580 558 580 0.98 12 13 1.1e-06 7.6e-05 23.0 4.3 1 23 586 608 586 608 0.99 13 13 0.00041 0.029 14.9 1.8 1 23 614 636 614 636 0.98
Sequence Information
- Coding Sequence
- ATGAACGGTACTATTGACGTGTCCTGTGTGAAAATTGAACGCGACCAGGAGCCGGAGTCGGTGgtggagcagcaacagcagcagcaggagctctATAATGTCTTGGGGAGCGCCAATTGTGCTCAGCTGAAAACTGAATTACTTTTCACAGAGATGGACATAGGACCTACTAAAATAGATCCGGATGGGATGAGAGTAGAGCCAGCACGCAAGCAGCAGGTTGTTAAAAAGGCGTCTGCAAGGACTCGCAGCAAGAAAAGAGCAGTTATAGCAGCAGCGGTctCTTCAACCGTTGTCATTGGACACCATCAGTGCCCGCATTGTCCACGGCATTTCGAACGCAGCGACGAGCTGAAAATTCACCTGCTAATACACACAGATCAGCTGTCCTACAAGTGTTCTTATTGTCCGAGCAGCTTTTCGCACAAGTCGATCTACACAACGCATATGTATGGACATACGAAGATATTTCCACATCAGTGCCCTGACTGTCGGCAAGGCTATATGAAATATGCCGATCTGCGCAAGCACCAACGCACGCATATTGTCAAGGACCTGAACAAATGTCGTGTGTGCCTCAAGAACTGCAAGAATTTTCTTCAATGTCCGCAATGCCCGCGCGTCTTTGCCAAGTGCTTCGAGCTAGAGATTCATCTGCAGATTCACAGCAACAAGCTGCCCTACAAGTGCTCACATTGTCCAAATAGCTTTGCCCACAAATCGAATTATATTGCGCACGTCTGCGAGCATACGGGCGAGTTTCCGCACAAATGCCGTCTTTGTCCGCGCGGATTTATGAAGCGAACCGATTTGGTTAAGCACAAATGCTCCGAATCGAACCGAATAAACCGAAggaaaaatgttgccaagcCAAACACAGATGCAAGCTGCAATGAAAAGGAACAAGGCCAACGACTGCAGCAATCTAAAGCGCTAGCAAAAGCGAAGCCTGTGAAGCCTGCAGTTCTAAGAAGAATCAGTCCGAGGGTTAAAATGCCTGTACAGGAATTGAAAACAGCAGAGAGCATAACAAAGCCCAGAAAGGgcaaacggcagcagcagcagcagaaatccATAACAAAAGACAGTGCCTTAGTGAATttgaagaataaaaataatgccaAGCTGAGATTCATCAAGCCAAAGCATCAGGAGGCAGACGCAGAGGCAGAGGAGCAAAGCAAACCTTTAAATGTTAGCTCAAGACTTGAAGCTAGCAAAGCTGTGAAGCAGCCTGCAATTAGAGTTAATAAGAAGCGCAGCCATAAATGCAATCCATGCAACAAGGAATTCCCCAACTTAAAGGAGTTGAAATTGCATCAAAActgctgcactcCGTCGAGCGGGCCAAAGACAGAAAAACAACCGTATGAATGTGAGCATTGCTTGAGGAAGTTCGGCCAGTTGTCCAGCCTCACAGAGCACAAGCAGATTCATATAGCTGAGCGACCAGCTAATTTGCCGCATTCAACACGTACACTCGAGAGGCCATTTAAGTGTCCGCAGTGCACGTGCACCTTTGCCAGCACTTTGAATCGGAAGAAACATTTGCAGATCCATCAAGCTGAAGCTCAGAGCGATCCGCCTTACAAGTGTATGCATTGTGCCAGGAGCTTTAGCAAAAAGTCACCATTTCTGATGCACGTGCGTGAACATACGGCCGAAGAACCTAATCAATGCACCTACTGCACGCGAGTCTTCAATTTGACCCACGAACTGAGGCAACATCTGCGCAATCATACGGGCGCACGTCCGTATGAATGTCCGCATTGTGCGAAAACCTTTGCACAGAGTTCGAACTTCCATTCACATCTGCGTACCCATACAGTCGAACGACCCTACCAGTGTCCACATTGTCCGCGCTCCTTTCTGAGAGCCTACAGCTACAAAGGTCATCTGTCCAGCCATACGGGCGAGAAACCGTAA
- Protein Sequence
- MNGTIDVSCVKIERDQEPESVVEQQQQQQELYNVLGSANCAQLKTELLFTEMDIGPTKIDPDGMRVEPARKQQVVKKASARTRSKKRAVIAAAVSSTVVIGHHQCPHCPRHFERSDELKIHLLIHTDQLSYKCSYCPSSFSHKSIYTTHMYGHTKIFPHQCPDCRQGYMKYADLRKHQRTHIVKDLNKCRVCLKNCKNFLQCPQCPRVFAKCFELEIHLQIHSNKLPYKCSHCPNSFAHKSNYIAHVCEHTGEFPHKCRLCPRGFMKRTDLVKHKCSESNRINRRKNVAKPNTDASCNEKEQGQRLQQSKALAKAKPVKPAVLRRISPRVKMPVQELKTAESITKPRKGKRQQQQQKSITKDSALVNLKNKNNAKLRFIKPKHQEADAEAEEQSKPLNVSSRLEASKAVKQPAIRVNKKRSHKCNPCNKEFPNLKELKLHQNCCTPSSGPKTEKQPYECEHCLRKFGQLSSLTEHKQIHIAERPANLPHSTRTLERPFKCPQCTCTFASTLNRKKHLQIHQAEAQSDPPYKCMHCARSFSKKSPFLMHVREHTAEEPNQCTYCTRVFNLTHELRQHLRNHTGARPYECPHCAKTFAQSSNFHSHLRTHTVERPYQCPHCPRSFLRAYSYKGHLSSHTGEKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -