Dana004687.1
Basic Information
- Insect
- Drosophila ananassae
- Gene Symbol
- -
- Assembly
- GCA_017639315.1
- Location
- CM029943.1:9440544-9445395[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0071 0.54 10.7 2.2 1 23 206 228 206 228 0.97 2 24 0.03 2.3 8.8 1.4 1 23 234 256 234 256 0.97 3 24 0.93 71 4.1 2.1 2 23 288 309 287 309 0.95 4 24 0.0016 0.12 12.8 0.6 1 23 382 405 382 405 0.94 5 24 2.7 2.1e+02 2.6 2.7 1 23 446 468 446 477 0.89 6 24 5.7 4.3e+02 1.6 0.1 3 23 478 498 476 498 0.93 7 24 0.068 5.2 7.6 1.3 1 23 576 599 576 599 0.95 8 24 0.38 29 5.3 0.4 1 22 608 629 608 629 0.93 9 24 0.0012 0.089 13.2 2.3 2 23 685 706 684 706 0.97 10 24 2.3e-07 1.8e-05 24.8 6.4 1 23 712 734 712 734 0.99 11 24 0.065 5 7.7 2.2 1 23 874 897 874 897 0.95 12 24 0.3 23 5.6 2.1 3 22 906 925 904 925 0.93 13 24 0.0091 0.69 10.4 0.8 1 23 934 957 934 957 0.95 14 24 0.0013 0.099 13.1 3.5 2 23 978 999 977 999 0.95 15 24 0.00016 0.012 15.9 0.5 1 23 1006 1028 1006 1028 0.98 16 24 7.1 5.4e+02 1.3 0.1 2 21 1055 1074 1054 1075 0.91 17 24 0.0031 0.24 11.8 2.2 1 23 1121 1144 1121 1144 0.96 18 24 0.018 1.4 9.4 0.4 1 23 1181 1204 1181 1204 0.96 19 24 0.00025 0.019 15.3 1.5 1 23 1231 1254 1231 1254 0.97 20 24 4.7e-06 0.00036 20.7 0.2 2 23 1277 1298 1276 1298 0.95 21 24 3.8e-05 0.0029 17.9 2.9 1 23 1304 1326 1304 1326 0.99 22 24 1.8e-06 0.00014 22.0 2.0 1 23 1332 1354 1332 1354 0.97 23 24 1.6e-07 1.2e-05 25.3 2.4 1 23 1360 1382 1360 1382 0.99 24 24 0.0092 0.7 10.4 0.2 1 23 1388 1410 1388 1410 0.97
Sequence Information
- Coding Sequence
- ATGCTGCCACCAAACACCTGCCGAACTTGCGCTCTGCAAAACCCCGATTTGCAGCCGCTGTCCGCTTGCTTGGAAAAGGACGCCAATAAGAGTTTCTACGAGGTGCTCCACGAACTGACGCAAATCGATCCCCTCCAAGAAAGCTTGGACTCCAGCCTACCTCAGCATTTGTGCACCCATTGCTTGAAAAGATTGGAGAATGCATACTCTTTTGTGCAGCAGGCCAGAAAAGTGAACGGAGAGCTCTTGGTTCGGTTGAGGGAGTGCCTTGATGAATCGCCCATAGACATACCCCAGGAACAAAAAATAAAAACTGAAGTTGCAGCGGATCCTGACGCAGGAATTGAGGATGCGGAAGCACTGGACATTCCAGCGGTGGAATGCAAGTGGGATGCGGAAAGTGACACCGATATAAGGGAAAATCCCGTCACTGCGAGCGAAACGGAGGAAGTCGATGAAAAGCCGTATCAACTACGACGAAGTGCCCGGAAAGTCAGGCTACCAACAGACAGTGAAAATGAGGACGTTAACATCAGCGAACAATCTCCGGTGAAACGCCGACGGGGCCGACCTCCTGGCAAGGCCAAGAGCCAGTCGCTGACGGCCGATGGTCGGTATGCCTGCCATGCGTGCGGAAAAAGTTTCTCCTGGTACCGCGACATGCAGCGTCATTCACGGAGCCATTTCGATAAAAATAGTTTCGTGTGCAGAACATGCGGGAAGGGATTTCTGCGCAAGGACAATTATGTGTTTCATCTTCGCAGCCACGACAAAAAAGTGGCTAAGCAGGAGTCCTCAAAGCTGGGCAACGAGTGGCTCTTCGCCGACCGCTTGTACTCTTCCAGCAACCCTAAAAAAATCGAATGCAAACTGTGCAACAATAAGTTCGAGAGAATTCAAGATCTCAGATGTCATTTGGACACTCACATAAGCATAGACAGTCTTCACGCCTTATTGCCGGACAGCGACGTGGTTCGAGAGCATTACCAAACACAGTCTGGCGACTTGGAGGAAGTCAAGCAAATTATCGTAGCAGATATAGCCAAGGGAGTTTTAGAGAAGTTTGCATCGGTCGTCAATTTCCATGGCTATGAGCTGGACATTAATGACTCCGATGAGGAGAGCCCTCTAGGCGATGAAAAATACGTTTGCGAAATGTGCAATGTGGGATTTGCTCGCAAACACCGTCTAGTGAGGCACACGCTGGAGGAGCACGCCCCGACATGGACAGAGGAGCTTCCTTGGCAACGCTGCAGCTTCTGCAAAGTCAGCTTTCTCTGCTCGACTGTCTACAATCAGCATTTGCAGTACCAGTGCCACAACAAGCTGAAGAAGTACAACTGTCGAAAGTGTCCTGGAAAGTTTATGTGGCTGGAAAACCTAGAGAGACACGCTTGCTCTCATCGGACGAACCTGGAACGTCACATCTTCTGTACTTTATGCGACGCTCAAATGCCCAGTCTAGCAAAGCTACGCATCCACCTCGTTCGCCACCAAAAAGATTCAAAAGACTTCATTCCTAAACTCCAGTCTATGTTCTTCCAATCCTTCTATCCCAATGGCTTGGAATGCACACCCTCAGAACTGAGTGCTCGTATTATTGAGGACTTTGAAGTCCAAGATTTCGACCGCTATTACAATGCTGCTACCTCCAGTGGTCGCGAGTTGGACATATTCGATTCAGAAACTGAGGAGTCGGAAGCAGAAGATGGCGAAGCGCCGCACCATATGTGTGTTCTTTGCGGGAAAGTGTCAAAGAGGCTTTTGGTTCTGCTCCAGCACCAGAAAAGCTTTCATTCTGAGAAATTAAGTGCCTTGCCATTCTCTTGTGAAGACTGCGAAGAAGGATTTGTGTGCGGCGCACTTCTTCAAAAGCATCGCAGGCGATGCAGGGCAATCAGACATTCAAAGTTCCATTGCCTAGACTGCAATCAACATTTCTTGTGGCACAGCAACTACGAGCGGCACTTACAAGCGCACCATGACCAGGAAGCGAGTCTGGAGACGAAGGAAAGTCGGTTGTCGAGACCAGGCTCATCGGCATCCAAGCTGCAGTGTGATGAGTGTGAAAAGACTTTTATTTGGCACAAGGACCTAACCCGCCACAAGCGGATGCACCAGGCAGAAGTGAAGTATAAGTGCCCACACTGTGATCGCAAGTTCCACCGCAAGGATAATCTTAAGTCTCACATGCGGGTGCATGCGACAGAGCAACATTCGGATCAATCGGCAGAGCACACATTGAATGGAGTTGATACTGCTCCTTCCATTTTGGCCCAGCTATGTCGTCCCCACGGCTGCAAGCAGATCCAATGCATGATCTGCCTCTCCCGCCACTCCAAAATTTCAGATCTCCGGACGCACCTCGCATCTCACAAGTACTCAGTGACTTTCTCCGACCATAGAGACATTACCAGCGCATCAAAGTCTATGTATCCAGAACTACCCGCCCCCTTAGACCGGCTTCAATTGGCAGAGAGAATAATGGCTGATGTGGATAAAGGATGCAACCTAGACAGATTTGTTTCCATCGCCAACGAAGCAGGCTTGGAGTTGACTCTGGATAGCAGTGAGACTGATACTGAGTCGGACCAAGAAGAGAATCATTCCACTCACACCTACTCCTGTCAAACCTGCGGACTGCAGGTAAATCGAAAATACCAGATGTATGCCCACCACATGGAGAAGCACAAGGGAGAAGAGAGTCCTCTCTTTTGCTCGCATTGCCAAACCAGGTTCCTTGATAAGGCTCTTCTGGAACACCACTCCCGAACTCTTTGCCGAAACTCCCAGAAACGATTCCAGTGCCGCAAGTGTCCGCTTCGATTTCGTTGGCGCGATAACTTAAAATTGCACAGCAATGTGGGCCACCAGCAGGATGAGACTCCAGCTGAAGGAAAATCCGTTTCCCCCCAAGGCGACGGCGATCTGCACTGTGAACAATGCCAGCGAAGCTTTAAGATGCAGAAGGATCTTACGAGGCATAACTTGATGCATAACCAGGAGTCCAATATATATCGGTGTCGGTGGTGTGCCCGCCGCTTCTACCGTTGGGCCAATCTTCTTCAGCACATAGTACGCCACGGTATCCGGGCCAACCAATTGCCCTATGCTGAGGCTCTTCTCGACTCATATGGACATCCTGGCGGTAACAAGATCATCGAATGCCGCGTGTGCTGCGTGAGTTTTCCTACAATTGCTGCCCTGCGCCTGCATCTTGAAACCAGCCCGGTGGGCACTCACCATGAGCTCTTGTCGCTCCAGAACTACTCTATAACAAATCAGATGGGCTACGAGCTTACACTGGAGGACTCTGAGACAGATGAGGAGGGCTGTAAACCACCAGGAGCTCCGGCGTTTTATACGTGCGGCATGTGCCAACTGCGTTGTGTTCGGAAATTCGAGCTTCAACAACATCAGCAGGCCATGCACCGAATTGAAAAGATTCCTGACGGCTGCGACAACTGCATCTTCAAGAGTGTGTGCCCAGAACTGATTGCCCACCATGTGAGGACGCAGTGTGGCAACCAGCAAAAACATTTTACATGCGCGCGATGCGGATATAAGTTTATGTGGGAATCCAATCTGTTGCTTCATATGCAACTGCAACACGACAAAAAGGAAGATGCAGCGCAGGACCCTGCTATTCCCGAATCGTCTGATGAGCCGTACAAAGCTACATGCCAAATCTTTCAATGTGGTCTCTGTCCCCGAAAGTACAACCGCAAGGATCGACTGACGGCGCACGTTAAAAAGTTTCATGGACCCAATGTGGAGAAGACACCCATCCGGCCACCGATCTCAGAGCCCAAGGAGCCGAAACGATTTTTATGCGCTTTTTGTGGCAAGGCCGTTAGCTCGTCCTCAAACCTAATCATCCATATGAGGCGCCATACCGGTGAGAAGCCCTTCAAGTGCGATTATTGCGATATGGCTTTCCCTCGATCCTCAGATCTCCAGTGCCATCGGAGGACGCATACTGGGGAGAGGCCGCACGTGTGCACAGTATGCCAGAAAGGATTCGCCAGATCCTACAAATTGCAGCAACATATGCGTATCCATAGCGGGGAGAGGCCCTATAAGTGCACCTACTGCGAGAAGAGCTTTACACAGTCCAACGACTTGACCCTCCACATCCGGCGGCACACAGGTGAACGCCCGTACCAGTGCGGCGTCTGTGGGGATCGGTTCATCCAGGGTACCGCTTTAAAAAATCATCGCCTCCAACATGGTCACCACGAGGATAGCGCCACTGCCCAGGGCTCGGTAACAGAAGGTACAGCAAGGCGTACGGTCCTAGAAAAGTTTGCTGCCTAA
- Protein Sequence
- MLPPNTCRTCALQNPDLQPLSACLEKDANKSFYEVLHELTQIDPLQESLDSSLPQHLCTHCLKRLENAYSFVQQARKVNGELLVRLRECLDESPIDIPQEQKIKTEVAADPDAGIEDAEALDIPAVECKWDAESDTDIRENPVTASETEEVDEKPYQLRRSARKVRLPTDSENEDVNISEQSPVKRRRGRPPGKAKSQSLTADGRYACHACGKSFSWYRDMQRHSRSHFDKNSFVCRTCGKGFLRKDNYVFHLRSHDKKVAKQESSKLGNEWLFADRLYSSSNPKKIECKLCNNKFERIQDLRCHLDTHISIDSLHALLPDSDVVREHYQTQSGDLEEVKQIIVADIAKGVLEKFASVVNFHGYELDINDSDEESPLGDEKYVCEMCNVGFARKHRLVRHTLEEHAPTWTEELPWQRCSFCKVSFLCSTVYNQHLQYQCHNKLKKYNCRKCPGKFMWLENLERHACSHRTNLERHIFCTLCDAQMPSLAKLRIHLVRHQKDSKDFIPKLQSMFFQSFYPNGLECTPSELSARIIEDFEVQDFDRYYNAATSSGRELDIFDSETEESEAEDGEAPHHMCVLCGKVSKRLLVLLQHQKSFHSEKLSALPFSCEDCEEGFVCGALLQKHRRRCRAIRHSKFHCLDCNQHFLWHSNYERHLQAHHDQEASLETKESRLSRPGSSASKLQCDECEKTFIWHKDLTRHKRMHQAEVKYKCPHCDRKFHRKDNLKSHMRVHATEQHSDQSAEHTLNGVDTAPSILAQLCRPHGCKQIQCMICLSRHSKISDLRTHLASHKYSVTFSDHRDITSASKSMYPELPAPLDRLQLAERIMADVDKGCNLDRFVSIANEAGLELTLDSSETDTESDQEENHSTHTYSCQTCGLQVNRKYQMYAHHMEKHKGEESPLFCSHCQTRFLDKALLEHHSRTLCRNSQKRFQCRKCPLRFRWRDNLKLHSNVGHQQDETPAEGKSVSPQGDGDLHCEQCQRSFKMQKDLTRHNLMHNQESNIYRCRWCARRFYRWANLLQHIVRHGIRANQLPYAEALLDSYGHPGGNKIIECRVCCVSFPTIAALRLHLETSPVGTHHELLSLQNYSITNQMGYELTLEDSETDEEGCKPPGAPAFYTCGMCQLRCVRKFELQQHQQAMHRIEKIPDGCDNCIFKSVCPELIAHHVRTQCGNQQKHFTCARCGYKFMWESNLLLHMQLQHDKKEDAAQDPAIPESSDEPYKATCQIFQCGLCPRKYNRKDRLTAHVKKFHGPNVEKTPIRPPISEPKEPKRFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHSGERPYKCTYCEKSFTQSNDLTLHIRRHTGERPYQCGVCGDRFIQGTALKNHRLQHGHHEDSATAQGSVTEGTARRTVLEKFAA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00550383;
- 90% Identity
- iTF_00477468;
- 80% Identity
- -