Basic Information

Gene Symbol
-
Assembly
GCA_017639315.1
Location
CM029942.1:5248311-5250059[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.0014 1.5 8.9 0.3 2 45 48 106 47 107 0.76
2 4 0.0024 2.7 8.1 0.0 1 30 179 219 179 225 0.77
3 4 0.71 7.9e+02 0.2 0.0 4 20 306 322 306 325 0.85
4 4 0.077 86 3.3 0.0 27 46 346 365 340 365 0.79

Sequence Information

Coding Sequence
ATGAGCAAAGTGTGCGCCTTCAATGAGAACGAGGAAGACGAAAACGAGACTGAGCAGAAATACGCCCACCTGCTGAACTCTGATTATTTTGGTGGTGCCAGTCAGTCCGGCTTGGAAAGCAGCGCCGATAAACGCAGTCGCTGCCAGTGGACCAATGAGGAGGTGGAACTCTTCCTGGGCAGCATTTATCAACTCAAGTTGCAAGCCCAGGTGCATGGGAAGCGTAATGCGAAGGTCTTTAAGGTGATTGCCAAGGAGATGGCCAAAAAAGGCTATTCCAAGAGCGCCCAGCAGCTGCAAACAAAGTACCATCAGCTGAGGAGACAGTATGTGAGGGCCAGGAATGGTGGTGAGCCCTTCGAGCACTTCGAAGCTCTGCACGAGCTGTTCCAGGCCAGTGGAGCCTCAGACTTGGAGCCGGAGCCGGACAGTGATAGTGAGGCGGAGATAGACGATGATATGACTGGCCTAGGCTCTGAAACTGAAGGGGAGGATACCTTGGATGCCTCTTCCTCTACAATGCACAACAATGCCCGCTGCAAGTGGACCGAGGGCGAGGTGGATATGCTGCTCGATCTCATCAACACAATGGGCCTGCGAAGAGCTCTTTTGAGCAAACGAAATGCCAAAGTGTTTAGAGCGCTGGCCAGAGAAATGGCCAAGCGAAACTGCAACAAGGGCCCCGACAAGTTGCGCATCAAGTTCCAGCTACTGCGGCGAATGTACAACAAGGTGAAGAATGGCACAGGTGAGACCTTTGAGCATTTCGAGGCCATGCGTCAAGTGCTGGATCCCACACCCGAAGAAGCTGCCACAGGCGAAGCGGATGCCAGTCTAAGTACTGCCAGCGAAACCGAATTTAATGATAGCGAGGAGGACGATGGAGATCCCTCACAAAGAGGAGCAGCTCACTTTTGGTCGGACGAGGAGGTGGATGCTTTTCTATTGGTTATTAGGGACAATGGCTTCTTTCGGGCCTTGGATGGCTCGAGGAAACGAAACTTTCAGACTCTGGTGCACATCTCAAATATCCTGGCCAAGCAATCCTTTAAAAGAACTCCCCACCAGCTGAGGAACAAGCTGAGAATGCTGCTGAAGCGACATCGCGAGGCCAAAGAGCATGGCTTGGAGAATGTTCGCATCCTGCCCCGCCACTTCGAGCTCTTCGACGAACTCATCAAGACACCGCACGAAAGCTCAAAGAGTGCCATCCAAAGACCCACCCGTCCAATGAAATCCTACTGCTCGAAGCCTCCGCGACCAAAGGCACCTCCCGAGACGGAGAGTGACAACTCCAGCTCCACCTGTGATCTTCTGAGGGCTGCCGGCGAAAGCGAAGATTACGAAGATGCACTGGATGGAGGTGAAGCAGAGCAGCCCACGCCCATGGAGGCCCTAACCGCCATTATGGAGGGTCAAAAGAAACTCCTGAATCTGATCAAGACGACCAACGAGAGCTTCCTGAGGGAACAACGCGAACAGCAACAGCAATTCCTGGAACAAGTGTCCGAGCTGATGCGCCGCGACCGAGAGGAGACTCTTCGCAGAATTAAGGAAATAATGCCACCCAAGTAA
Protein Sequence
MSKVCAFNENEEDENETEQKYAHLLNSDYFGGASQSGLESSADKRSRCQWTNEEVELFLGSIYQLKLQAQVHGKRNAKVFKVIAKEMAKKGYSKSAQQLQTKYHQLRRQYVRARNGGEPFEHFEALHELFQASGASDLEPEPDSDSEAEIDDDMTGLGSETEGEDTLDASSSTMHNNARCKWTEGEVDMLLDLINTMGLRRALLSKRNAKVFRALAREMAKRNCNKGPDKLRIKFQLLRRMYNKVKNGTGETFEHFEAMRQVLDPTPEEAATGEADASLSTASETEFNDSEEDDGDPSQRGAAHFWSDEEVDAFLLVIRDNGFFRALDGSRKRNFQTLVHISNILAKQSFKRTPHQLRNKLRMLLKRHREAKEHGLENVRILPRHFELFDELIKTPHESSKSAIQRPTRPMKSYCSKPPRPKAPPETESDNSSSTCDLLRAAGESEDYEDALDGGEAEQPTPMEALTAIMEGQKKLLNLIKTTNESFLREQREQQQQFLEQVSELMRRDREETLRRIKEIMPPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00477279;
90% Identity
iTF_00477279;
80% Identity
-