Basic Information

Gene Symbol
-
Assembly
GCA_017639315.1
Location
CM029942.1:8745961-8749854[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.0011 1.3 9.1 0.1 21 45 769 791 758 792 0.85
2 2 3.3e-05 0.037 14.0 0.1 23 44 1042 1065 1029 1067 0.86

Sequence Information

Coding Sequence
ATGAGCAGCAGCACCGCCGGCAGCGATGTGGCTGCGACGCCTTCATCGTCTCCACAGGTCAAGGTGGAAGCGGACTTCTCCGGATCGAAGTTTGAAATCGATGCATCGCTGTCTGACGAGGAGCGGCGGTTCTACTTAAAGATGTATCCCTCCGTTGATTTGGTAAATCTGCGCAAAGTACACTGCACCGTGTGCCGCCTCCACTTGGGAACTGCCCCGGTGTCCGAGAACAACATCAAGATGCATCCCATTTTGCGAGTGTCGCACTGCGTCAAGTGCCACGATTTTTATAACAGCGGCGAGTTTTCCAAGGGTGAGGACGGCTCCGAGCTCTACTGCCGCTGGTGCGGGCAAGGCGGCGAGGTATACTGCTGCTCCACATGCCCCTATGTCTTCTGCAAGTCCTGCATCGTAAAGAACCTATCCAAGGGCGTCATAACGGACATTGAGCAGAACGAGAACTGGAACTGCTTCAGCTGCACCTCCAAGATTCTGTGGCCCTTGCGCGCCCAGCACTGGGCTCTCGTAAACTTCATCCAGACACAAAAAAGAGCGATTCAAGCTTTGCCGCTACCCGAACTGGAAATTCGTCGTCAAATGCTCAAGGATAACAGCAATTGCTGCCGCTTGGCAAAGTCGAAGACTAGCAATATGTTAGACTCAGGGGAGAGCCTAGAATCAAACGTCTCGAAACGCAGCCAAGGCAGCCCAGCGGCGGCTCCAAAGAGGACCAAGCCGTCTCCGGCACCACCGGCAAAGCGGCTGAAAGCCTCCTCTAACGATGAGGTAGTCTGCACTCCTGATCTTCTCAGCATGCTAGAACCGGACTGCCAGCTGTCGACGCCCCCTAAAACAGGCGGTCGCATGCCGGCGCTACCCGCAAATGTCACCACCACCCCCAAGATCATCACAGTCCAGCAAAACTATACTGGTCCCACACCCAGCAGTAGTACCGGCAGCAATGGACGAGAAAGTGGGACAATGCCAACGCTTCAGTCACGAAACAGTCTTCCGCCGCCGCTAGTCCTGAGTGGGTCGGGAATACGCTACCGCCAGAATGGCCCAAGTGGTAACAATGTTGTGCGCCGGACAGTTGTTCCCAACCCGGTGCGAAGCTCGGGTCCTGTCTTTCACACCATTAACGGTTTCCGGGTGGACTTGAACAGTGCAGCACAGCAGGACTCCTATCGACTGCCGAATGGCCGGTTAATCCAAGTAAAGCGACAGGTCCCCCCGACACAGGCGCCGCCTGCACCGTCCCCGATAGGCCTTCCGCCGGGCATTGTTATCCGACCACTGCGACCTACGCCCTCGGGAGGCGGTAGACAGTCCCAGGCACAGGGCTTTGGCAGCAACATCGGCATCTACAATCCGCAAAGCAATCAGCAGCAACGACCTCCTCAGATTGTTCGGATCGGAAGCATGAATCCTGCAGCCGCAGCCCAACAACAAGCCCAGCCATCAAATGTAAACGGAGGACAGCCGGCTGGACATCCCAACCAGCCTGGGGCGAAGAGTTCAACACTGGTGCGCCGAATATTCCCAGATAACCCGGTGGGACACGCGCGGACCCAGTTGCAGGAGCAAATTTTCAGTGCCATGGAGATCTGCACGCATCTCACCGGAAAGGTTGTGTCCCTAACCCACTCGAATGCCTATAATCAGGTGCGAGGCTATATGGATCTCAAGGAACTCTACATTCACATGTCATATCTGATGACGTACGCAATTGGACGATTCAAGAACCTGCAGGAGAAGTGCTTGGTGGACATGCGTGAGATGGGATTTAAGAACGATGCCAATAGTTTGGAGAACGGTCAGCTGGCAGCTGCCGTGGATTATGTCTGCTATGGCCAGCTGGAAGATGTGGATCTCTTCAACAGGGGCTCAAACAGTTTTCACAATCAGGTCTACGAGTACAGAAAGAGCTTGCACGCTAATCTCAAGGAGGGCGAGGACTGCGAGCCACTGCCACCTCTATTGCCACTGGGAGTCAGAGCCGAGGGCGATCCCATCGATGAGGATGAGACTGAATTGCCAGCGGAGAGGACCATTGAGGATGATAACAATGTGGAGGAAGTAGAAGACTTGGATGCGGATGCCGATGATCAGGACGACTTGGATGACGACTTAGATGACGACGACTTGGACAACGAGGATTGCGGTGAACTGGGTACTGAGGAGAGCATGAATCGGAACGAACAAGCTCACGCCTATGACCGAAAGCTGACGCGGCTACTCCGCGAATACCCTTCGATCTGGTGTACCCGACATCCGGATTATGGAAAAAAGGAGGTCACCTTGAAGCAGTGGCGCGTGATTGCTACTCACTTTCCGCGCGGAGACGACATTAAACTGCGATGGAAGAATATTCGCAAACGCTACGTCAGAATCGAAAGGCGTCTGAAGCAAGGGAAGCGCTTCAAAGGCTACTTTGACAAAGCCACAAACTATTTGACCAACAGGGATCGGCCTCGGAGCGAGTGGCTGGCCGTGGATTGTGGCGAAGATGATGGCGACGGATTCGAGCGCAAGCAACTGGATGTCATCGAAAATACTATGGAAAACAAAGATCAGAAAAAGTGTAGTTTGGGAAAAATCAAACCGAAAGGTGTCATCCCAATAGATGTGCGTGCTATCGACCATCGCATCATTAACTTCGCCAAGAGTCATCCGGTTCTGTGGCGCAAATCAACCGATCCCGAGTTCAACAGTATTGATGAGCAAACCAGAACATCCCTCTGGCAAAATTTTTGGAAATCTGCTTCCAATTATCCCTGCGAATATCTCGTGGAACGGTGGCAGCAGATGTATGAAATGTACAAGACTTTCCGACTGAAAACCATAAAAGATAAACGAACCTTTGCCAATATGGAGCTGAAGTACTCAAAGTACTTGGCCAGCTTGTACTTCCTGTACAAGATTGACGAACAGGACCTACGGGATGAGTTCGAGCCACTGCAAGATTGCCTGCCCAACGGAACCGAAACGGTTGAAAAGCTCAAGGACATGCCTGATGATAAGCAGTTCGTCCAGCAACTGGTTCTGGCCATGCGGGCCTATCCCACGCTGTGGAATCCTCGGCATGGGGACTACAGTGATGTGGGAGCCAGAGAGCGTTTATGGCCGGAGGTCGCCCGAAGATTACCCCGTTTTAAACGGGATGCAAAGGCCTGCAAGTTGCGCTGGCAGATGGCCAAGTTCGCCTACGAGTGCTACGGCAGGGAAATGGAGAGGCAACGACCCAACGAGCGGAAGCTACAGAAACTGCGCTCCAATTTCCCGCTCGAGGAGATGCGATTTCTTAATATTTAA
Protein Sequence
MSSSTAGSDVAATPSSSPQVKVEADFSGSKFEIDASLSDEERRFYLKMYPSVDLVNLRKVHCTVCRLHLGTAPVSENNIKMHPILRVSHCVKCHDFYNSGEFSKGEDGSELYCRWCGQGGEVYCCSTCPYVFCKSCIVKNLSKGVITDIEQNENWNCFSCTSKILWPLRAQHWALVNFIQTQKRAIQALPLPELEIRRQMLKDNSNCCRLAKSKTSNMLDSGESLESNVSKRSQGSPAAAPKRTKPSPAPPAKRLKASSNDEVVCTPDLLSMLEPDCQLSTPPKTGGRMPALPANVTTTPKIITVQQNYTGPTPSSSTGSNGRESGTMPTLQSRNSLPPPLVLSGSGIRYRQNGPSGNNVVRRTVVPNPVRSSGPVFHTINGFRVDLNSAAQQDSYRLPNGRLIQVKRQVPPTQAPPAPSPIGLPPGIVIRPLRPTPSGGGRQSQAQGFGSNIGIYNPQSNQQQRPPQIVRIGSMNPAAAAQQQAQPSNVNGGQPAGHPNQPGAKSSTLVRRIFPDNPVGHARTQLQEQIFSAMEICTHLTGKVVSLTHSNAYNQVRGYMDLKELYIHMSYLMTYAIGRFKNLQEKCLVDMREMGFKNDANSLENGQLAAAVDYVCYGQLEDVDLFNRGSNSFHNQVYEYRKSLHANLKEGEDCEPLPPLLPLGVRAEGDPIDEDETELPAERTIEDDNNVEEVEDLDADADDQDDLDDDLDDDDLDNEDCGELGTEESMNRNEQAHAYDRKLTRLLREYPSIWCTRHPDYGKKEVTLKQWRVIATHFPRGDDIKLRWKNIRKRYVRIERRLKQGKRFKGYFDKATNYLTNRDRPRSEWLAVDCGEDDGDGFERKQLDVIENTMENKDQKKCSLGKIKPKGVIPIDVRAIDHRIINFAKSHPVLWRKSTDPEFNSIDEQTRTSLWQNFWKSASNYPCEYLVERWQQMYEMYKTFRLKTIKDKRTFANMELKYSKYLASLYFLYKIDEQDLRDEFEPLQDCLPNGTETVEKLKDMPDDKQFVQQLVLAMRAYPTLWNPRHGDYSDVGARERLWPEVARRLPRFKRDAKACKLRWQMAKFAYECYGREMERQRPNERKLQKLRSNFPLEEMRFLNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00477280;
90% Identity
iTF_00550194;
80% Identity
-