Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_017639315.1
Location
CM029943.1:8955596-8965902[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.027 57 3.4 0.0 1 21 334 354 334 357 0.82
2 2 7.3e-19 1.5e-15 56.5 0.0 1 43 762 805 762 807 0.95

Sequence Information

Coding Sequence
ATGTATATATTTAGTTGCAATGCATTTCAATTAAGCCTAGAACGCGTTGCTGAGGAATTAATGGGTCGCAGGCAATGGAAACATTACCAAGAGCAACATTTGAATATCGACGAGCAACAGCCAACAGTAATAGCCGGTTCCGAGGACGAGCCACCGCAATACAACAGCAACAGCAACAACCACAATAGCAGAAACCCAAACCACTGTAAACCAGAAAACCACCGTCTAGAGCAGCACACACCCAACGGTAGTCTGCTACTGGAAGAAGATTTTGACAACAACCAAACATCACACGACTCATCACGTTCTCCTACGCCGGGAAGCATAGTGACAGCCACAAGTACACCATCACCACCGCCAGAACCCATCGATTGGAGACCGTCGGACAAGTGCAATTTTTGTATTAACGGTCGCCTGCTAACGGTGAACGCCAAGGGCGAATTGGTGGCCGAATCAGCAGCAGCTGCAGCAGCAGCGAACACAGTTAGTTTTAGCCACATTCATCAGCACGACAGTGACAGCAACTCGAGCGCATCACTGCTCCACCAAAACAACATCTGCGGCAGCCGAGGTCGCCACATTGCTGCGACAACAACAAACGCCACAACGGGTACAGATCGAGCGGCAACAGCATCAGCAGCTAATTCTTTAGAATTGTACAAGCTGCTCACCCAGCAGGCTGCCAAAATGACATCGATGGACTCGATGGCCGCCCAGCTGGCGCAGTTCTCGCTGCTCGCGGCCGACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCGCACTCAAAGATACGCCCAGTCCCAGTGCAGATGCACCGCTCGATCTTAGCAGCAAGCCCTCGCCGAACTCATCGATTAGCGGCGATGTAAAGTCCATCAGAGCCTGTGCTACGCCCACGCCGAGCGGGCGAGGAGCGTACAGCGAGGAGGATCTGAGCCGGGCGCTGCAGGACGTGGTGGCCAACAAGCTGGGCAACCGGAAGACGAGCCATGTGCCGCGCTCCCTCGTGGTCGAGAGGCTGTTTAAGATGCAGCAGGATCTGGACCAATCGGATGCGGATCTTGGGGCTGATGACCAGGACGCGGGCGACTCTAACGACGACGGCGAGGCAGACGTTGACAGCAATGCCTCTACCCCGGCTGCGGGCTACCCCCCGGACTTTGTCCAGCTGCGAAAGTTCTCGGAGCACAATGGCAGCGATCTGGGCGACGATCAGGATCCGCGTGATTCACCCAAAATGGGCCGACTGCCAGGTAACAACAGTGTCGCATCCGGTGGGGGAGGGACACCGGGCGCAGGCGGAGGGGGAATACCACCGATGCCGGCCATTGATGCCAATGTCCTGCTGCACACCCTGCTGCACACCCTGGTCCAATCCGCCGGGATTGGAGCCATGCCCAAGCTGGACGAGACGCAGACGGTCGGCGAGGTGATTAAAAACCTGGTGATGGCCAACAGTGGAGGAGCCGGAGCGATAATGAATGACGCCCTGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTGCGGCCGCCTTCAGACACCGCCTGCCGAAGTCAGAGACGCCAGAGACAAACTCCTCGCTGGACGCCAACGAAGCCACCGAGGATCCCATTCTGAAGATTCCGTCCTTCAAGGTCAGCGTGCCGGGTCTCTCGCCGCTGAACAACAACAACAACAACAGCATCGGCAGCAACAACAACCGCAACGGCAGCAACCGTAGTCCCCACTCAGCATCGCCTATGCTGGCCGCCGCCGTCGCCCAAGGATCCGGGGGAGCCGGAGGCTATGGCCTCGCCAGCTCCTCGTCGAGCATCCAGAAAATGATGGCCAGCAACATCCAGCGCCAGATCAACGAGAATCGGGTCCAGGAACAGGAATCCCTGCGGAACGGTAACTCCTCCGACTGCAGCTCGAACAACGGCAGCTCCACGAGCGGCTATAAGAAGCCCAGCATATCGGTGGCCAAAATCATCGGCGGCACGGACACCTCGCGTTTCGGCGCCTCGCCAAACCTGCTTTCCCAGGCGCATCACCACCACTCGGCCGGAGGCCATCACCTGAGCCACCACCAGCAGCAGCAGCTTAGCGCCCAGGAAGCCGCGGCTCTGGCGGCGGGCAAGGGCACCCGACCCAAACGGGGCAAGTACCGCAACTATGACCGCGACAGCCTGGTCGAGGCGGTAAAGGCAGTGCAGCGCGGCGAGATGTCTGTGCACCGGGCGGGCAGCTACTACGGGGTGCCCCACTCCACACTGGAGTACAAGGTGAAGGAGCGGCACCTGATGCGTCCCCGGAAACGGGAGCCGAAGCCGCAGCCGGACCTGGTAGGCCTGACCGGACCGGCCAACAAGCTGCACCTCGATAAGCTGAAGCCGGGTAACTCCAAGCTCAGCAACGCCCTGAAGAACAACAGCCAGGCGGCAGCTGCAGCAGCGGCGGCAGCAGCCGCGGCCGGCACGCCCAACGGCCTCAAGCTGCCAGCGCTCTTCGAGGCTGCCACTCCGCAGATGCCCTTTCAGTCGAATATGTTCTGGGCCCAGCCAAACGCCACGAGTGCTTACGGCCTGGACTTCAACCGGATGGCGGAGGCCATGCGGAATCCGCAGCACAACGGGCCGATGAAGAGCGCCCTGGAGATGACGGAGAGCATGTACGACGGCATCATCCGGAAGACCCTGCAATCCAGCGGAGCGGCAGCGACGTCCAACGGCAGTTCCGTGGCGGGCAACGGTAGCACCAACGGCCACGCCCTGCTGGACCAACTGCTGGTAAAGAAGACGTTGCCGTTCACCAACCACCGAAGCAACGACTACGCCGCCACCTGTTCCAGCGCCAGCGGAGAGAGCGTGAAGCGGTCAGGGAGTCCCCTGGGCGGACCGAGCGGCTATCCGGACATCAAGAGGGAGCGGCTGAGCGCCGACAGCGGCGGCAGCAGCGACGAGGAGCACATCAACCTCAACAACAACAGCGACCTGGCGCACAATAAGAACAAGGGCTCCAGCTCCTTTTCCGGAAACGGCAACGGCGCCGGAAACGGAAATGGACAGGCCACCTCCAACGGTAACGGGCGGAGCAGCCGGATGACCTCGCGAGACTCGGAAACGGATGTCTCCAGCCTGAAGAGCGAGCAAAGCCACCACAAACTCATGGATCTCAATGGCGGCGGAGGCGGTGGCAGCAACAGTCACATCAAATGCGAAGCGGAAACGGAAATGGGCAGACTGGAAAGCGGTGGCGGAGGCGGCGGCGGCGCTCCGTCTTCAATTCTGCACGAAAAACTGGCCCAGATCAAGGCCGAACAGGATCAGTTATAG
Protein Sequence
MYIFSCNAFQLSLERVAEELMGRRQWKHYQEQHLNIDEQQPTVIAGSEDEPPQYNSNSNNHNSRNPNHCKPENHRLEQHTPNGSLLLEEDFDNNQTSHDSSRSPTPGSIVTATSTPSPPPEPIDWRPSDKCNFCINGRLLTVNAKGELVAESAAAAAAANTVSFSHIHQHDSDSNSSASLLHQNNICGSRGRHIAATTTNATTGTDRAATASAANSLELYKLLTQQAAKMTSMDSMAAQLAQFSLLAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPALKDTPSPSADAPLDLSSKPSPNSSISGDVKSIRACATPTPSGRGAYSEEDLSRALQDVVANKLGNRKTSHVPRSLVVERLFKMQQDLDQSDADLGADDQDAGDSNDDGEADVDSNASTPAAGYPPDFVQLRKFSEHNGSDLGDDQDPRDSPKMGRLPGNNSVASGGGGTPGAGGGGIPPMPAIDANVLLHTLLHTLVQSAGIGAMPKLDETQTVGEVIKNLVMANSGGAGAIMNDALLXXXXXXXXXXXXXXXXXXXXXXXXVAAAFRHRLPKSETPETNSSLDANEATEDPILKIPSFKVSVPGLSPLNNNNNNSIGSNNNRNGSNRSPHSASPMLAAAVAQGSGGAGGYGLASSSSSIQKMMASNIQRQINENRVQEQESLRNGNSSDCSSNNGSSTSGYKKPSISVAKIIGGTDTSRFGASPNLLSQAHHHHSAGGHHLSHHQQQQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGPANKLHLDKLKPGNSKLSNALKNNSQAAAAAAAAAAAAGTPNGLKLPALFEAATPQMPFQSNMFWAQPNATSAYGLDFNRMAEAMRNPQHNGPMKSALEMTESMYDGIIRKTLQSSGAAATSNGSSVAGNGSTNGHALLDQLLVKKTLPFTNHRSNDYAATCSSASGESVKRSGSPLGGPSGYPDIKRERLSADSGGSSDEEHINLNNNSDLAHNKNKGSSSFSGNGNGAGNGNGQATSNGNGRSSRMTSRDSETDVSSLKSEQSHHKLMDLNGGGGGGSNSHIKCEAETEMGRLESGGGGGGGAPSSILHEKLAQIKAEQDQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00481466;
90% Identity
iTF_00477262;
80% Identity
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