Basic Information

Gene Symbol
UBP1
Assembly
GCA_017639315.1
Location
CM029942.1:4499726-4510769[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.3e-54 4.4e-50 169.9 0.4 23 191 330 495 314 500 0.91
2 2 4.5e-14 3.8e-10 39.3 1.0 184 222 527 565 523 566 0.92

Sequence Information

Coding Sequence
ATGCGGCGAGAGGGCATAGCCTCGGTGGCGGCTAGACATGCTTTTGTAGCTGTTTGTGATGAGGTTCCAATCCAGAACCGCCACTTCATCAGCGGCTACCACCACCAGCATATTAGTTCGGATTATGAGCAAGTGATCAACTTTGTTGACTCGCCACCAAACTCTGAAGAATCTTGGACAGGTAAGAGAAGATCTGATCTTAATAGTAACTTCATGTACATCATCATAACTGCAATCGCAACTGTCAATCGCCTCCCAATCGCCACCGAACACGTAGAATCCTCATCCTCCTCCGCATCGCTAATCGAACAAATTACGATTGTCGTAGACGCCCAGTCGAAGGAGTCGCCGGGACCGCAGATCATTGACGTGCAGACCATTTATCTGAACAGCGGATCACGCAAAAGACGAATGGATTGGGACTCCCTGGACATTGGTCAAAGTGAAAGCTCACCCACTGGCTCCCAGAGCGGCGACCTGCCCACCAAAGTGGTCCATCACGAGAGGGATAAGCACAAGCGCGAGAAGCACTCTGGCCGCAGCAGCTGGAGCGATGATATCGGGTTCGATCTGAATGCCGAGTTCAACAGCAACTCGTACCTGAACAATGACAACTTCCTGGCTTTCTCGCCCACTCTAAGCACCCTGAAGCAGGAGCCCCAAACCGAGCAGATCAAGCCGAGCCCCAAGATTTCGTTGGACAATGCCGCAGGATCTCCCTCGGTGGCCATTGCCAAGTTGGACGAGGCCCAGAACTCACCGCTGCAGGTTATACCGCAGGGCAAGGAATCATCTGCCGGATCTGGTTCCGCCGGAAACACCAAGCACGATGTGAACTCGGGACTGGCGTGTGGCTGTGGCTCTCCCCAGGGATCCCCACAGGCCAACAACGACTATGAGTTGAACGACAAGGGCAGTGTCCTGCCTCAGCAGCAACTGAGTGTCCTGGACCCCACCAAGATAGAGATTGTGTCGGCCAACGGAGCCACCAATGCCGAGGACCACAAGTTCCAATACATCCTGGCCGCGGCCACTTCAATTGCCACCAAGAACAACGAAGAGACCCTGACGTATCTCAACCAAGGCCAGAGCTACGAGATCAAGCTGAAGAAGATCGGTGACCTGTCCCTCTACCGGGATAAGATACTGAAGAGTGTGATCAAGATCTGTTTCCATGAGCGCCGCCTCCAATTCATGGAACGCGAACAGATGCAGCAATGGCAGCAATCCCGCCCCGGCGAACGCATCATTGAGGTGGACGTACCGCTCTCGTATGGCCTGTGCCACGTGTCGCAGCCATTAAGCTCCAACTCCCTGAATACCGTGGAGATTTTCTGGGACCCATTGAAGGAGGTCGGCGTCTACATCAAGGTCAATTGCATTTCAACCGAATTTACCCCCAAGAAGCACGGCGGCGAAAAGGGAGTCCCCTTCCGGCTGCAGATCGAAACCTATATAGAAAACACAAACACCACAACAGCGTTGAACAACGCCTCCAATGGTGGCACCGGAAACGGTAGTGCCACTGTGGTGACTGCCCCAGGCTCACCGGAACAGACTCCCAATGGCAATGGCTCCGGAAACAGTGCCAAACAGGCGGTCCATGCCGCTGCCTGCCAGATTAAGGTTTTCAAGCTAAAGGGCGCTGATAGGAAGCACAAGCAGGATCGTGAGAAGATACAGAAGCGTCCTCAGTCCGAGCAGGACAAGTTCCAGCCCAGCTACGAGTGCACCATTATGAATGACATCTCCCTGGACTTGGTGATGGCCGCCACCACCACTGGATGCTACAGTCCCGAATATATGAAACTCTGGCCCAATTCGCCTGTCCACATACCCAAGTACGATGGAATGCTTCCGTTTGCAGCCAGCGCAGCATCCCCGGCCACCAGCAGCAGTCCCATCGCCATCAACTCGGTGACGTCCACCAACTCACCCACTCTGAAGCTGATGGACACAACCAACATGGTGTCGCCGCAGCATGTGCCAGCTGACATCGATGAATGCAACCAGAACATCATGCCGGAATCGACGCCCTCGCAAGTGACGCAGTGGCTGACCAATCACCGCCTCACGGCTTATCTTTCGACTTTCGCGCAGTTCTCCGGATCGGATATAATGCGCATGTCCAAGGAGGATTTGATACAGATCTGTGGCCTGGCTGACGGCATCCGCATGTTCAACATTTTGCGCGCCAAGACTATTGCGCCCCGACTTACCATGTACGCCAGCCTGGATGGCTGCAGCTACAATGCCATCTACCTGCTGTCCAACACCGCCAAGGAGCTGCAGCAGAAGATCTTCAAGATGCCAGGGTTCTATGAGTTCATGGCGAAGGCCAGTGCCCAGGAGAACGGAGCAGGAGGAGGAGCTGCAGCCGCAGCAGCAGCTGCCCTTTATAATAACTGGAGCATGCACTCGAAGTACTCTGGAAGCGGATCGAACATCTTCAACGAGGCCAACAAGAGCTGTGTGTACATTTCCGGGCCGTCGGGCATCCTGGTCAGTGTCACCGATGAGGTGCTTAACAACGAGGTGAAGGATGGCAGCCTCTACGCCTTGGAGGTCCAGGCCGGCAAAGTGATCCTGAAGCTGATCCACAAGCAGGACAACAACTAA
Protein Sequence
MRREGIASVAARHAFVAVCDEVPIQNRHFISGYHHQHISSDYEQVINFVDSPPNSEESWTGKRRSDLNSNFMYIIITAIATVNRLPIATEHVESSSSSASLIEQITIVVDAQSKESPGPQIIDVQTIYLNSGSRKRRMDWDSLDIGQSESSPTGSQSGDLPTKVVHHERDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNDNFLAFSPTLSTLKQEPQTEQIKPSPKISLDNAAGSPSVAIAKLDEAQNSPLQVIPQGKESSAGSGSAGNTKHDVNSGLACGCGSPQGSPQANNDYELNDKGSVLPQQQLSVLDPTKIEIVSANGATNAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSLYRDKILKSVIKICFHERRLQFMEREQMQQWQQSRPGERIIEVDVPLSYGLCHVSQPLSSNSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTNTTTALNNASNGGTGNGSATVVTAPGSPEQTPNGNGSGNSAKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDISLDLVMAATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFAASAASPATSSSPIAINSVTSTNSPTLKLMDTTNMVSPQHVPADIDECNQNIMPESTPSQVTQWLTNHRLTAYLSTFAQFSGSDIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTMYASLDGCSYNAIYLLSNTAKELQQKIFKMPGFYEFMAKASAQENGAGGGAAAAAAAALYNNWSMHSKYSGSGSNIFNEANKSCVYISGPSGILVSVTDEVLNNEVKDGSLYALEVQAGKVILKLIHKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00489142;
90% Identity
iTF_00487773;
80% Identity
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