Dame008063.1
Basic Information
- Insect
- Drosophila americana
- Gene Symbol
- hang
- Assembly
- GCA_018152915.1
- Location
- JAECXQ010000464.1:18388762-18404714[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.21 12 6.3 1.0 3 23 246 267 245 267 0.93 2 16 0.6 35 4.8 3.2 3 22 374 393 372 393 0.89 3 16 0.00045 0.026 14.7 3.3 1 22 474 495 474 497 0.90 4 16 0.052 3 8.2 0.1 2 21 509 528 508 529 0.93 5 16 0.00052 0.03 14.5 0.2 2 23 656 678 655 678 0.95 6 16 0.0015 0.087 13.0 0.1 1 23 686 709 686 709 0.96 7 16 0.00011 0.0066 16.5 0.2 2 23 795 816 794 816 0.97 8 16 0.00021 0.012 15.7 2.9 2 23 932 954 931 954 0.97 9 16 0.017 0.98 9.7 0.2 2 23 963 985 962 985 0.95 10 16 0.0009 0.052 13.7 0.1 1 23 998 1021 998 1021 0.97 11 16 9.3e-05 0.0054 16.8 1.1 1 23 1062 1084 1062 1084 0.99 12 16 0.0014 0.085 13.1 0.9 1 23 1092 1115 1092 1115 0.96 13 16 5.4e-05 0.0031 17.6 0.4 3 23 1125 1145 1124 1145 0.98 14 16 0.0038 0.22 11.8 0.1 1 23 1180 1202 1180 1202 0.97 15 16 0.00044 0.026 14.7 0.6 2 23 1292 1314 1291 1314 0.93 16 16 0.0048 0.28 11.4 0.3 3 23 1370 1390 1370 1390 0.98
Sequence Information
- Coding Sequence
- ATGTGCGACACTGTCGCAACTACAACCACAAGCACACCAACAGCAGCAGCAGGATCCGGAACAGGAACAGGAACGGGTGGTGCTGCTGGCGATACAGCGACAACAATGGAGGAGCGTACGCGACAAAGCTGCTGTCGCCTATGCATAGCGCCCGCCAGCGAATGCATTTCGATCATTAACAGTTATGCGGCCGATAAGGAGCCACTGGCCACTAAAATACACAACTGCGTAAATATCAAGATCACGCCGTTGGATCGTCTATCGCTGCATATTTGCCATGCCTGCATCAGCTATTTGAACTCTTGGCAGAGCTTTAAGAATCGCTGCCTCAGCTCACAGTCCAAGCAGAGGCAATGGCTGGACACCGATAAAAGCAAGCAGCAGACACTTTTAGGATATTTGGACTTGAACAAAACGGAGAATGGCAGCTCCATTGAACAGCAGCACGAAACGAACATCGATTCGGCGACACCGCTGCCTGCCGTGCCCATCAAGGATGAGCCCATTGACGACACGGATGATGACTTCCAAATGAAGTGCATAGACGAATCCGATGATATGATGGATCCAACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGATGTGCCACTAATGACCTCCGACTATGATTACACGGCGCAGCATGGCGTGACGGCGGTTGCGGCGGCGGCATCGCTGCCCGCCAGCGCGGTTGCAAATGTGGCTGCCGCTGGCGACTCCAAGGTGGCCAGCTGCCGTGCCTGCAGTCTGCAGTTCTCGACGCGCGCGAATGCGCGACGACACGAGCGCAATCTCCATCCGAATCTGTTCCAATTGTCGACAGACTCGCCAAATAATACGCCCATCACAAAACCGACACCGGCATTGGCAGCCGCGCTGGAGATACAGCGTGCAGCTGCCGCGGCAGCGGCCACCGCGGAGGCAACCAAAGCTGCCGCTGGTGGCAACATATCAGCGCAAAAGTATCGCCAGGTGGTCATGAACACGTTCATCAAGTGCGAGAACGGCGGCTTCGACTACGACAATCCGGAACAGTATCAGCAGCTGCTGACCCGCGACAAGGTTGAGTTCATTCAGGAGAACAACGAGTTTCTGGAGCAGTACCAGACGATGACCTGCCGCTGCTGCAACAAGTACTTTAACACATACAAGAATTTTATGGCGCACGTACGCAAAAAGTATCCGCTGCTGCCGCGCAATTTATGCTTCAACTGCCTCAAGATGAACGACTCCAAGGCACTGTTCATATCGCATCTGAAGAAGCGCAACTGCATCAATTTGTATCGCGTTCTCAACGCTCTCCGCATCAAGCAGCCAAACTTCTCTCATGCAACCGCATCCGGAGCGGCTATCTCAACCGATATGAGTGGTGTTCCAGAGAAGCTACGCGCCAAGGAGCTGCTGGTCAACAAACTGTATGAGTGCAAGCTCTGCCCAAAGGGCTTTCGCACCAAGCACGAGTTCCGCACCCATGTGTACGACAAGCATGCGGATGTGCAGCGCAAGGATAACAATTCGATACAGTGCAGCTTCTGTGGATTGGACTTCGCCGATCCCGTAGATCGTCGCCGTCACTACAACAACATGGACTGCATTGTGCGGCTACGATGCATGACCTGCGATGCCAAGCTGGAGACGCATCAGCGCTTCCTCGATCATGTCTATCAGGATCATTTGGGCGGTGTCAGCAGCGACAATGCATCCACCGCAAACAGCGGCATGGATCATTCGCCGGGCAAGCGTAGCCTGCTGGGCGCCCTTGGCATTGGTGTTAGTCAATCATCCAATGATGAGTCGCGCAGCAGCAGCCACAACAACAACAATGCAGTGGAAACGCCGCTAACCTCAACACCAAAACCAGCTGCAGCTGGATCGGGAACTGCAGCTGCGGCGACCAGTGGCGGCTCCGCATCTGGCAATCGCGATGCCCCCAAATCGCAGTATTTTTCCCGCATGCCGCAGGTGTGCCCCATTTGTGGCCAGCAGTACAACAACTACAACAACGTGCTGCGCCACATGGAGTCAAAGCATCCCAATAAACTGCCCGAGACATACAAATGTGTACGCTGCGGCCTTGGCTACCCGCGAATCTCATATCTGCGCGAGCACATGATAAATGTGCATGGCGTGGACAAGAATCGGCATTCCGGAGGCTTTGAGTATATTGTGAATGCCGATGCTGTTAAATTGGCGGATGGCAGCACGCCCAATGTCTACACCGGACGCTATGATTATGTGATGAAGGATCTGATGTCAATAACAAATGGTGGGACACTCGATGATGAGGAGGAGGAAAGCGGCAGCGTTGCCAAAAAGATGCGCCTCGATGATAGCAGCAACAACAGCAGCATCAACATGAGCATCGCCAATCAGCAAAAGGAATGCCTCATCTGCAATGCGGTGTTCAGCAACAACATTGGGCTATCCAATCACATGCGCTCGCATTATACCGCCTCCACGACGACGAGTGCAGCGCTTGCGGCGGCCAATCGCATGACGCCAAAGTCGCTGACAATTACTGCAACGCCGCCGCTGGAAACGGCTGCCGCATCGTCCGCAAGCATTGCGGTGTCGACGGCGGCGGGGGCGGCGGCAACAACAGCAGCAACGCCCGCCACAAGCACTGCTACAGCAGCTGCGAGTGCAACTACAACAACAAGTACAACAGCTGCCGCCGCCGCCGCCGCGTCCGGCAGTTTGCCGCCAGCGATGGCACATCAAACGCCACAGGAGCAGGCGGTATTCCGACGTAGCCTGGATCAGGCAGCCGATCGTCGCTTTCGGCGCATGCGCTGTCGCATCTGCCAGCGCAGATTTAGCTCTAAGAAATCGTACCGCTACCACATGCTGACCGACCATCAGGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTGTGCAATGCGGAGTTCGCCTACGAGAAGGGCCTCAAGGTGCATCTCTTCAAGGTGCACGGGCGGGCCATTAAGGATGAAATGATTGTGAAGCAATTTGAGTGCGATATCTGCTCCATTGTCTACAGCTCTGAGCTGGAGCTGCAGCAGCACAAGCGCAGCGTGCACAAGTCCCAGCTGGGGGGCGCCAGTGATGCGGCCAAGTCCAAATCGTCAGCAGCTTCATCAGCTGCTGCTGACCTTGCCGAGACTTCCGGCACGGCTGTGCCAGCCCTGCCCCTCTATTGGTACCAGTGCAAGTACTGTCCATCCAATTTCAACACCAACAAAAAACTGGCCATACACATCAACTCGCACGACGAGTTCGACTCGAATGATTACTCGTGCAAGGACTGCGGCAATGTCTACAGTGGCCGCAAAAGCCTTTGGGTGCATCGCTATAAGAAGCATCCGCAGATACGCATACCGGAGGTGGCGTGCACCATTTGCGGTGCCCGGTTCACCGATCAGGAGATGTTCAGCAAGCATATACAGAAACATGAACAGGATCTGTATGTGGATAATCCATTGGCGGCCATGTTCGATGATGGACCAGCGGACGCTGGCCAATTTCAGGTGGAGCGCCAGAACGAGAACGGCGAATATGCGTGCGATCTGTGCGCCAAGACGTTCCCCCAGGTGATAGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAAATCGCTGAAACGGAAACGTGAACTGAAATGCGAATATTGCGCATCCACATTCATTAGCAACAACAACCTGCGTCGCCACATGTACGAGCTGCACAAGCACGAGGTCAGCAATCTGCCGGAGCCGCCAGTGATTGAAGTGGATGAGCCTTTAACTTGTCGCCGTTGCGGCGATCTACGGTTTGATACCAAAGAGCTGTGGATCGAGCATAAATTGGCTGATGCCAAAGTTGTGCGTCCATTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAGTACTTGTCGCGCAAGGAGAAGCTCATCAATCACATTAACAATCATCTCAAAGAGGATCCGAGGCGCCTCAACTTTGACTACGCGCGCACAGATAGCTCCAAGCTGAACGGCAATAGCAATGGCAAACAGACGCCGCAGCATCAGCAAAAGTCAAAGGGCCAGCAGGCGGTTGGCAGTGGCAGTGGTAGCGGCAGCGGCAGCGGCAGTCGCATCGGCGCGTCTGATGGCGTGGCTGCTGATGCCGATGGTGGTACATCATCATCTGAGAGCGAGTCAACAACAACAACAACATCGCATTCAATTGTGTTGGTAAACTTCTACCGCATATGA
- Protein Sequence
- MCDTVATTTTSTPTAAAGSGTGTGTGGAAGDTATTMEERTRQSCCRLCIAPASECISIINSYAADKEPLATKIHNCVNIKITPLDRLSLHICHACISYLNSWQSFKNRCLSSQSKQRQWLDTDKSKQQTLLGYLDLNKTENGSSIEQQHETNIDSATPLPAVPIKDEPIDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPLMTSDYDYTAQHGVTAVAAAASLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISAQKYRQVVMNTFIKCENGGFDYDNPEQYQQLLTRDKVEFIQENNEFLEQYQTMTCRCCNKYFNTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRIKQPNFSHATASGAAISTDMSGVPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASTANSGMDHSPGKRSLLGALGIGVSQSSNDESRSSSHNNNNAVETPLTSTPKPAAAGSGTAAAATSGGSASGNRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDEEEESGSVAKKMRLDDSSNNSSINMSIANQQKECLICNAVFSNNIGLSNHMRSHYTASTTTSAALAAANRMTPKSLTITATPPLETAAASSASIAVSTAAGAAATTAATPATSTATAAASATTTTSTTAAAAAAASGSLPPAMAHQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDICSIVYSSELELQQHKRSVHKSQLGGASDAAKSKSSAASSAAADLAETSGTAVPALPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQIRIPEVACTICGARFTDQEMFSKHIQKHEQDLYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKSLKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEPLTCRRCGDLRFDTKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDPRRLNFDYARTDSSKLNGNSNGKQTPQHQQKSKGQQAVGSGSGSGSGSGSRIGASDGVAADADGGTSSSESESTTTTTSHSIVLVNFYRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -