Dame011871.1
Basic Information
- Insect
- Drosophila americana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018152915.1
- Location
- JAECXQ010000444.1:19653252-19666054[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8e-06 0.0051 16.2 0.0 2 32 265 295 264 302 0.91 2 3 1.6 2.9e+03 -2.2 0.1 4 19 462 483 461 485 0.83 3 3 5.6e-19 1e-15 56.8 0.0 1 43 609 652 609 654 0.95
Sequence Information
- Coding Sequence
- ATGCGCTTAGAACGCGTCGCTGAGGAATTCATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAACCAATTGAATATCGCAGAGCAACAGCCCATATCAATAACGACAGAAGCAGAAGACAGCAAACACAAGCAGAGCCACTGCGAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAACATTTCAACAACAACAACAGCGGACCGCTGCCATTTGAAAGCGATTTTGACAACAACCATACATCACAAAACCACGACTCAAGTGCAACATCACGTAGCTCAGGCTCACCATCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTAAACGCCAAAGGCGAATTGGTGGCCGAAACAACGGCAATCGCGTCCAGCAACAGCAACAACAACAACGGCACAGCTGTGCAGCAGCTGCTCACCCAGCAAGCAGCTGAAATGACATCAATGGAATCGATGGCCGCCAAGCTGGCACAGTTCAACATGATGGCCGATTTCAATTTGATGAACACGCTGGCCAATCAACAACATGCTAACTCGGTAACACCAACTACCTCGGAATTATCAGCCGCCGCTGGCAGTCCCACACTCAAGGATACGCCCAGTCCCAGTGCAGATGCACCATTGGATCTAAGCAGCAAGCCATCGCCAAATTCATCGATCAGCGGCGATATCAAGACAGCCAGAGCTCTGTCAGACTGCGCCACTCCCCTAGCAGCAGCACGCCACACGTACAGCAACGAGGATTTGAATAGCGTGCTGCAGGATGTGCTGGTCAATAAGCTGGGCACACGCAAAGCGGCCAGCCAGTACCAAGTGTCGCGCACCACGCAGCGCAATAAGCTGAGCAAAATGTCCTTAGACGGCAAAAGGACAAATGTGCCAACGCCGCCAGAGCTACAACAGCAACTGCAGCACGAACTGGACCTGGACGAGCAGGATGAATCCGGCGAGGAGCCTGGCGAAGGCGATAGCAATGCGTCGACACCAGCGCCTGGCTTTCAGGAAATCGCCCAACGCATTGCAGCCACTGATCATCTGTGCAAGCTGAGCAGCATATCCGAGCACAATGGCAGCGAGCTGGGCGACGAGCTGGAATCAGTTATGTCGCCAAAGCCGACGCGTTCTCAGAGCGGCGGCACACCAACTGGACACATTCCAGCTGCAACAGCTGGCGGCAATGCCGCTGGATTGCCCATGCCCATCGATGCGCGTGTCCTGTTGCATACCCTAATGCTGGCAGCGGGCATTGGCGCCATGCCCAAGCTGGACGAGACGCAGACGCTGGGTGACGTGTTCAAAACGCTGCTGATGGCCAACAGTGGCGGCATCATGAGCGAGGCGCTCGCCGGCGTTGTGGCGCCCAGTCTGGAGAGCAACGGCAGCGTCTCGTTGCTGCAACAGCAGCAACAGCAGCAGCAGCTAAATAATGTTGCTGCAGTTGCCGCGTATCGTCGCCACCTACCAAAGTCTGAAACGCCTGAGACCAGCTCCTCATTGGAAGCCAATGAGGCATGCGAAGATCCCATACTGAAGATTCCGTCCTTCAAGCCCAGCATATCAGTGGCAAAAATCATTGGCGGCACAGACACCTCACGCTTCGGTGCCTCACCTAATCTGCTCGCCCAGCAACATCACGGCCATATGAGCGCCCATCATGCCCACCAGCATCAGCATCAGCACCAGCATCAGCAGCTCAGTGCACAGGATGCCGCTGCACTGGCCGCCGGCAAGGGCACGCGACCGAAGCGGGGTAAGTACCGCAACTATGACAGAGACAGCCTCGTGGAGGCAGTCAAGGCCGTTCAGCGCGGCGAGATGTCTGTGCATCGTGCCGGCAGCTATTACGGTGTGCCACACTCAACGCTAGAGTACAAGGTGAAGGAGCGGCATTTGATGCGGCCGCGCAAGCGTGAGCCGAAGCCTCAGCCGGATCTCGTAGGACTGACAGGCGCAGCAAATAAGGTGACTTTGACGGGACTGAATCATCTGGATAAGCTGAAGTCCGGCAGCAGCAATAGCAGCAGCAACCCCAATAATAGTTCCGGCTCCAAGCTGAGCAACGCGCTGAAGAACAACAGCAGTGCGGCAGCTGCGGCTGCGGCAGCGGCAGCGCCCAATGGCATGAAATTGCCCATGTTCGATGCCGCACCGCAGTTGTCCTTCCAGCCGAGCATGTTCTGGGCCCAGCCGAATGCCGGCGCCAACTATGGACTGGACTTCAATCGCAGTCCAGAATTTCTTAAGACGCACCTGGCCGAGGTGATGCGCAGCAGCCCGCTGGGCGTGGCCGCCAATCATCATGGCCATGGCGGCGTGCACATGACCAGCGCCGTGGACTTTGCCGAGAACATGTACGACGGCATCATACGGAACTCCCTCAAGAAGGATGGCGATGTAATTGCTGGGAGCGGCACTAGCGGCAATGGCAATGGCAATGCGCTGCTGGATCAGCTGCTGGTGAAGAAGACGCCACTGCCATTTACCAATAATCGTAGCAATGACTACATCAGCGCCGCCTGTTCCAGTTCCGAGAGCGTCAAGCGTCCGGGTAGCCCGCTGAGCGCCTATTCGGATATCAAGCGCGAATGCCTCAGTGTCAAATACGAGCTGGAGCCAACAGCAGCGCAAATCTCACCCAGCAATTCGATTTTGCACGAGAAGCTGGCGCAGATCAAGGCCGAACAGGCCGATTGCAACGCACCCGAGGAGCAGTTATAG
- Protein Sequence
- MRLERVAEEFMGRRKWKHYQDQLTRNQLNIAEQQPISITTEAEDSKHKQSHCEPLNHRLAQPNGQHFNNNNSGPLPFESDFDNNHTSQNHDSSATSRSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNAKGELVAETTAIASSNSNNNNGTAVQQLLTQQAAEMTSMESMAAKLAQFNMMADFNLMNTLANQQHANSVTPTTSELSAAAGSPTLKDTPSPSADAPLDLSSKPSPNSSISGDIKTARALSDCATPLAAARHTYSNEDLNSVLQDVLVNKLGTRKAASQYQVSRTTQRNKLSKMSLDGKRTNVPTPPELQQQLQHELDLDEQDESGEEPGEGDSNASTPAPGFQEIAQRIAATDHLCKLSSISEHNGSELGDELESVMSPKPTRSQSGGTPTGHIPAATAGGNAAGLPMPIDARVLLHTLMLAAGIGAMPKLDETQTLGDVFKTLLMANSGGIMSEALAGVVAPSLESNGSVSLLQQQQQQQQLNNVAAVAAYRRHLPKSETPETSSSLEANEACEDPILKIPSFKPSISVAKIIGGTDTSRFGASPNLLAQQHHGHMSAHHAHQHQHQHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVTLTGLNHLDKLKSGSSNSSSNPNNSSGSKLSNALKNNSSAAAAAAAAAAPNGMKLPMFDAAPQLSFQPSMFWAQPNAGANYGLDFNRSPEFLKTHLAEVMRSSPLGVAANHHGHGGVHMTSAVDFAENMYDGIIRNSLKKDGDVIAGSGTSGNGNGNALLDQLLVKKTPLPFTNNRSNDYISAACSSSESVKRPGSPLSAYSDIKRECLSVKYELEPTAAQISPSNSILHEKLAQIKAEQADCNAPEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -