Basic Information

Insect: Drosophila aldrichi
Gene Symbol: -
Assembly: GCA_035045965.1
Location: JAWNOM010000199.1:4879250-4881058[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.33 25 5.7 0.4 2 23 141 163 141 163 0.86

2 7 4.3e-06 0.00032 21.0 3.0 1 23 180 203 180 203 0.98

3 7 9.4e-06 0.0007 20.0 2.3 2 23 312 333 311 333 0.96

4 7 0.004 0.3 11.7 5.8 1 23 339 361 339 361 0.98

5 7 1.1e-05 0.00078 19.8 1.7 1 23 367 389 367 389 0.96

6 7 1.8e-06 0.00013 22.3 3.0 1 23 395 417 395 417 0.99

7 7 0.00022 0.016 15.7 4.6 1 20 423 442 423 444 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.33	25	5.7	0.4	2	23	141	163	141	163	0.86
2	7	4.3e-06	0.00032	21.0	3.0	1	23	180	203	180	203	0.98
3	7	9.4e-06	0.0007	20.0	2.3	2	23	312	333	311	333	0.96
4	7	0.004	0.3	11.7	5.8	1	23	339	361	339	361	0.98
5	7	1.1e-05	0.00078	19.8	1.7	1	23	367	389	367	389	0.96
6	7	1.8e-06	0.00013	22.3	3.0	1	23	395	417	395	417	0.99
7	7	0.00022	0.016	15.7	4.6	1	20	423	442	423	444	0.95

Sequence Information

Coding Sequence: ATGTGCTCCATGTCCGTGTTGTGTCCACTGTGCGCAGTGCCCAGTTTCACTAGCATCGATGCACTGCAGCAGCGTCTAATCAAGGCGGCCAACGGCCCTCTGGCCTGTCCCTTTCCCAACTGCAAGGAGCTCTTTCTGGGTCTGGACAAACTGACCATACATCTATTTAGCCACACTAGCCTGATGAGCCAGCCGGCGGCAgatccagctccagctccagttccagcttcAGTTGTAGTGCCTACAACAATTCAGTCCACTCCAgtggcagcagaggcagcttCAGCTGTTCTCCCTTCGACAAATTGCCCTGCTGCAGCtagcccgcctcctgctgctgctgttcccaAGCGACGTGGCAAAAAGTCGCGTGCCAAACCCATCGAGCAGCCGCCCCCGCTGCCTTCCACGCCTCCTGCCAGATGTGACATTTGCGAGTTTAATTTTCGCAACGAGGAACTGCGAGACATTCACTTCCGGCTGGTGCATGAGAATGCGGAGATAACAGAGCCGACGctggggcagcagcaggagccctACAAGTGTCATCTGTGCTCCAAGACGTTCCGCATGAAGGGTTCCCTGCGTGTACATCTCAAGGTGTTGCACACGGTTGGCGCCATCACGAGTGCCACTAGCAGCAGcccgaacaacaacagcagcaacatcaacaacaacaacagcaacagcaatcagAACAACAATGCGAGCAATAGCAATGGCCACATCATTAGTGCCACGCCCAAAATCAGCATTTGTGATCGCATTCGGCACAAGGAGGCGTCGtccagcaatggcagcagcgccTCCACCGCGAACAGCAACACTCAGCCGTACGCTCTGAGCGGCGCCATCTACATGCTCAAGCAGGAGCTGCCCGCTGCAGCGGAGACGGCGCCCGGTTCGGAGTACGGCAGCACGCCCAAAAACTGGGAGTGCGACGTGTGCACCAAAATGTTCACCACCAAGTATTTCCTGAAGAAGCACAAGCGTCTGCACACGGGCGAGATGCCCTACACCTGCCAGTACTGTGCCAGAACCTTCACCTTCCAGCAATCCTATCACAAGCATTTACTCTATCACAGCGAGGTGAAGCCGCACGCCTGCGGCATCTGTGGGCGCGCCTTCAAGGAGCTGTCAACGCTGCACAACCATCAGCGCATCCACAGCGGCGAGAAGCCCTTCAAGTGCGAGGTCTGCGGTAAATGCTTTCGGCAACGTGTCTCCTTCTTGGTGCACACACGCATCCACACGGGAGTCATGCCCTACAAGTGCGAGCAGTGCAAGAAGACATTTCGCTACAAGGTCTCGCTGCGTACACACAAATGTGAGCCACAGACGCCGGAGCAGCTGATCAAGGCGCTGCTGGACTCCAATGTGAGTGCGGCCAGTGTGCAGGCCGAGCACACAGCAAGCAATGCGGCCATTCATATGAATGGCACCACAGATCACGAGGCGTTGCTCTCGCAAACGATTGATGACATTGTCGTGGAGAGCTGCCAGAAGCTGGGCATTTGCAGTGTGGAGCCGCCGCAGCAACCACAGCCGGTTGTGATGGACAGTGGCGTGCAGTTTGATGGCAGCGGCTccccgctgcagcagctgcagaattTGCGGCTCTACTCGCCGCAGCAAACAGAGCAGGCCAGCTCGGATGGTGAGCTGTTCCGTAACTTCCTCATGGACGCCACGTAA
Protein Sequence: MCSMSVLCPLCAVPSFTSIDALQQRLIKAANGPLACPFPNCKELFLGLDKLTIHLFSHTSLMSQPAADPAPAPVPASVVVPTTIQSTPVAAEAASAVLPSTNCPAAASPPPAAAVPKRRGKKSRAKPIEQPPPLPSTPPARCDICEFNFRNEELRDIHFRLVHENAEITEPTLGQQQEPYKCHLCSKTFRMKGSLRVHLKVLHTVGAITSATSSSPNNNSSNINNNNSNSNQNNNASNSNGHIISATPKISICDRIRHKEASSSNGSSASTANSNTQPYALSGAIYMLKQELPAAAETAPGSEYGSTPKNWECDVCTKMFTTKYFLKKHKRLHTGEMPYTCQYCARTFTFQQSYHKHLLYHSEVKPHACGICGRAFKELSTLHNHQRIHSGEKPFKCEVCGKCFRQRVSFLVHTRIHTGVMPYKCEQCKKTFRYKVSLRTHKCEPQTPEQLIKALLDSNVSAASVQAEHTASNAAIHMNGTTDHEALLSQTIDDIVVESCQKLGICSVEPPQQPQPVVMDSGVQFDGSGSPLQQLQNLRLYSPQQTEQASSDGELFRNFLMDAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00516486;
90% Identity: iTF_00551805;
80% Identity: -