Basic Information

Insect: Drosophila albomicans
Gene Symbol: -
Assembly: GCA_009650485.1
Location: NC:7797671-7832293[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0018 0.11 12.6 3.0 1 23 1151 1173 1151 1174 0.95

2 8 0.17 10 6.4 1.0 1 23 1179 1202 1179 1202 0.96

3 8 9.3e-05 0.0056 16.7 1.0 1 23 1389 1412 1389 1412 0.96

4 8 0.0054 0.33 11.1 0.5 2 23 1421 1442 1420 1442 0.96

5 8 0.048 2.9 8.1 0.6 1 23 1449 1472 1449 1472 0.96

6 8 1.4e-05 0.00085 19.2 1.4 1 23 1478 1500 1478 1500 0.97

7 8 2.9e-06 0.00018 21.4 2.0 1 23 1505 1527 1505 1527 0.99

8 8 0.0026 0.15 12.1 6.2 1 23 1533 1555 1533 1555 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0018	0.11	12.6	3.0	1	23	1151	1173	1151	1174	0.95
2	8	0.17	10	6.4	1.0	1	23	1179	1202	1179	1202	0.96
3	8	9.3e-05	0.0056	16.7	1.0	1	23	1389	1412	1389	1412	0.96
4	8	0.0054	0.33	11.1	0.5	2	23	1421	1442	1420	1442	0.96
5	8	0.048	2.9	8.1	0.6	1	23	1449	1472	1449	1472	0.96
6	8	1.4e-05	0.00085	19.2	1.4	1	23	1478	1500	1478	1500	0.97
7	8	2.9e-06	0.00018	21.4	2.0	1	23	1505	1527	1505	1527	0.99
8	8	0.0026	0.15	12.1	6.2	1	23	1533	1555	1533	1555	0.99

Sequence Information

Coding Sequence: atgagtgccaacagcagcaatcagAAATTGCAACAAATGTCTACAGATGCTGATCAATTAGCAAAGGTGACGATGACAAAGACAAAGAACGAAGAAgcaggcggaggaggaggaggagaaggtgGCGGAGAAGTAAGCGAGCTTACGGAAATGCCACGTgtgtgtcgttgttgttgcaaacGCGACATGGAATTGCTGCAAATATTCGACGAGTCAACCAATCATacgacaccaacaacagcaaaacaaacacaacaacaacaacatcaattgTCATCGCTGTCATTACGTCGacgcagcaaacagcaacaacgccacgaagaagagcagcaaaagCGCAAATGTGATAATCCCGTGGACTATGCACTGAGTGGAGCACACAGCAACATGGACACTGTACTCGAGGAGATGATCATTTGGAAGCTCAATATATCATGTAACGATGGATTACCCCAAGAGATTTGCCGACAATGCAAAGCACAGTTCATTATGCTGGCCAAGTTCCGACGGCGTTGTGGGCGCGTGCAGCAGATACTTCGGGGATACGCTCAGCAGATTGCCGAGCGTCAGTCGTTGAACAAAGATCTCGATAAGGATAAGGAAACTAATAAGCCACCACAAAATCAGACTGAATCACAATTAGAGCGCAAGCGTCGCTTGGAGGAACCGCAAACAGTTGAGAAGGAAGCTTCTTCAGCCAAGATACAGCGACGTCTCGATTCTCCGCAAGCCAATCGTGGAACGAAGCAATCTACGACGACGACCACTTCGAGAGTCTCGAAGTCGCGTTCACCCTGCAAACGAATGAATAAACCCTGGCGAACGAAGGCAGCGCGAAAGCAACTATCGGACACAAGCTCTTCGAGTGTGTCTGGGCCACGTTTAGAAGCCTTCACAGCAGTCACAACATTCGCTTCCTCCACATCTTCCTCGTCGGCTCCGACAACTCCAGACTATCTCAGCGATTTGTCGGTGAATCCGTGTCGTGGTTTTGCCAACGACGACAGTTCCTCAATCGCATTGTCCAGCTGCGATGGTGAAACGTCACCGCCAAGCAATTCTAAATTACAGTTTCCGCCCAAACGCGCCTTGCAAAGATCGCAAATAGTACTGCGAAACAGACGAAGATTAAGCACACCCGTGAAGCGAGCTAAGCGCATCGTACGCAAGACTCCGGAGAAATCAAAGCAGCTAAAAATAAAGCCGGAAGCTGATGAGCCAAATGCTCAAGATGTGGGCAATAAATTGGCGGAGTCTCCGACGAGCAGCACAGATGAATCCAGGGCAGAGGAAAGCAAGGCGACAGAAATAGTTAATGAAGAGCAAATCCGCAAATCAGAAGCCATCAACACTGCAATTaaagagcaaacaaaagaTGAAACAATGCCAAATGAAGAAATGAAgagcaaagccaaagaaaCAATTGAAGAGAGTGACAAACTGAGAGAggaaaatgaaactgaaacagaatcTGGAACAAAGCCAGAGcaggagatggagatggagcaAGCTGTGCAATTTGAGGAGTTGACTTCGTCCACGGAGCAAACTCAACCCGCAGTACCATCTCCCGAATGTGAAGTGGAAGTGAGTCTGGCATCAAATGATGAGCAGCAAAAGTCCGAGCTGATTGTCAGCATACCTCTGGAGGCGCTCGATGATGAGCTGCAGCACAAACTGTGCAATGCTGAGGCAAAGGAGGGGAGAGCAGAAGaggaaggagaaggagaagcagCAGTTGGCAAGGAGAACGGCGAGATCGATGATGTGAATAACAATGAGAATGAGCATTTTTGCCGGAGTGCTACAGCAGATAGCTTCAATGCTGCTGTGGCACTCGagacaaaacaaattgaagcaGAACCCGATGGAGGAagtggaggaggagaaggagcagGAGGCGTGGATGATGATATGCCAACACTAGAAAGTCTCGTGGAGCTGCAGGAAAAGAAAGTGGATGAAGAGAGCGAACAGGTTGTGCTGTCAGTGCCACGCATAACGCACAGCTCGATGGATTTTTTGGCCGAGTTCGAGAAGCACTGCGAAAAGACGTTGAAGGAACatcagcagaagcagcaacagcagcagccacaggcGCCATTGGAGCCACTGCAGCTGGAGGAGGCCAAGCAGCAGATGCAGGTTGAAATGAACGATGTGGAGAGCACGCTGCATGGCATACTCAACGAGATGCAGGATCAGCATCTCTACACGCCCGTCTGCACACCCATCGATGAGTTTCTCACACCCGCCGACTATGCGCCGCTGCCCGAGACGGAATCCGCGCCGCCAACACCTGCGAATGCCAGCGATCTCTATGAGCCAGCGAcggtgcaacaacagcaacaatcacagcagcagccacaagtGAAGGATGGCAATCTGTTTGATAGCAGCAACTTCAGCAACGAGCTGATTGGCTTCCAGAATGATATGCCCTGTTTTGAGAACATCGAGTCATCGCCTGAATCGATGGCCGCGCAGCAAAGTCTGCAGCTAGAGCTGACGCAGCTGCTCAACGATTTGCAACCGCCAACCGttatcaacagcagcagcagcaacaacactccacaacagcagcagccacagctgcaaacgcaacagcaacagttgttgcCGCCTGCCCAGCTGGTGCCGCTAGAGACAACCAGCTATGATGCACTGTATCCTGCAGCGCCGGCAGCAACACCAGTCACCGCACCCATCTCTCCGCTCTCCGACAACTCAGCCAGCAAATTGCAGCTGATACAAATGCAACCACAAGAGCCACTGTGGCAGGCACAAGCAGCCGCCgcagttgccgctgccgccgcccaCCAGACGACACATTTGCAATGGTCCACTGTGGGTGGGCTGGAGGCCATCAAGACGCTGCCCAGCAGCAATTTggacaacacaacaacaacgtacTACATAAATGCCAGCGATCTCTATCAGCAGACAAACAATTTGACGAGCGACAGTTATGCGTTGCTCGACAACAATGAGAACTACATCttggagcaacagcagcagcagcaacaacaacagcagcagcagcagcaaccgatAATGATACTCATTCAGCAGCCGGAGCTGCAGCCAGTGGCATCAGCGAGTAATCCGCAACAGGCGCCGTTGCACATCACGTATGCTTCGGCGCTGGGCAACGAGTTGCACGGCTATCAATCACCACAACatcagcagccgcagcagcagcagcaaccacaccagcagcaacagcaatcgtcgccgccgccgccacagcggcaacaacagctacagctgcagcaacaagtacaaaatccaaatcaaaCAGTATTAGGTTTACCACAACTTGTggcgccgccgccaccgcgaGGAAGGCCGCCAATGTTAAAGTGCCGCTTCTGTCAGAACGGACCGCGTTTCGCGAGCAGCTTGGAGTACAGTCGCCACATCATCGAACTGCATCCCGCCGTGGCACCCTTCAACTGTCCGCACTGCCCGCAATCGTTTGCCGGCCGCAGCAAACGCAACCAGCACATCCTCAGCCATCATGTGGTGCAGCAGTTCCATTGCGGCCAATGCTCACAAATGTTTCCCGCCCAGCGAGCCCTCGACCTGCATCTGCAGCGCTTTCACATGCCGCTTCTCGCCGACGCAGGCGGCGATGGTGTCCGGCTAGAGGAGGTGCAGCTGCAGATAGCCACCAAGGCGCAGCAGCCATCGCAAGCGTTGCAAACATCGCCTCTACTGGCAGCGCTTGAACAgccgtcgccatcgccatcgcagCCACGAAGGACGCGCATACTTTGCTGCCCCGATTGCGAAGACTGCACTGCATCTGTGAGCAGCCATCAACATCGCAAGGAGCAGCCTTACGAGGAACTGAGCAATCTACAGCCACCGCCCACAGTGCTGACTCCACCATCGACAATTGCGTCGCTACCATCGCCGCAACCAGTGTGCCCAACGTCGCATATAACGCTGCCCTCGCCGGAGCAATCGGAGCCGGACTCGACGACAGCGACGCTGCGGCACTTCCGCAAACGTTCGGTGCCCACAAGTGCAGTGTCAAcgccaacgacgacaacagcgGCCACAACAATGCTGATGACTGCAGCATCGCCTTCGTCGTCACCATCGTCATCCACAATGGAGAACAGCGCATCGCTGCAGATGAGCAAACTTCGCGGCAGCCATCAGTGTCTGGTGTGCGACAAGCGATTCACCAACATCATTGCGCTGCGCAAGCATCAGCAGCTGGCTCACGACTCACAGACGACGATGCCGTGGGTCTGTGCGATCTGTAAGCGGGGATACCGGAAACGCACCGACATGGACAATCACATGAAGTCACATGAGCCGAAGGGTCGACCGTATGAGTGCAATAAGTGTTGGGTGAGATTCCCGGAGTTTAAGCAGCTGGCGATGCACAAATTCACCGTCCATGAGCTGATCAAGCCGCATACGTGCGATGAGTGTGGTAAACAATTTGGTACGGAGAGCGCCTTGAAGACGCACATTAAATTTCATGGTGAGCGAGGCTTCCAGTGCGAAGAGTGCAACGAGACATTCGCAAATCTCAAAGAGTTTCGCAAACATCGACGCACCCACAACAGCGAACTGTTTTACAAGTGCGAACACTGCCCACGTACTTTTCTACATTTTACGAGCTTTCGTGCTCATATGAACACACACTTGCCGCTGGGCGTATTTCTCAACGATAAAACTACAGCGCAGCTGCCCAACAAATTGGAGCATCCGGGCAACGAAGAATTATTGCCACTGACGCCTCTGAGCAACGTCCACAGTGGCGGCAGCATCAGTGAAGATTGCCCCGGATCCGTGGAGATGGTTGAGAGCAGCATGGCCCAGTCGCTGGAGATGATTATCGATGCGCCATAA
Protein Sequence: MSANSSNQKLQQMSTDADQLAKVTMTKTKNEEAGGGGGGEGGGEVSELTEMPRVCRCCCKRDMELLQIFDESTNHTTPTTAKQTQQQQHQLSSLSLRRRSKQQQRHEEEQQKRKCDNPVDYALSGAHSNMDTVLEEMIIWKLNISCNDGLPQEICRQCKAQFIMLAKFRRRCGRVQQILRGYAQQIAERQSLNKDLDKDKETNKPPQNQTESQLERKRRLEEPQTVEKEASSAKIQRRLDSPQANRGTKQSTTTTTSRVSKSRSPCKRMNKPWRTKAARKQLSDTSSSSVSGPRLEAFTAVTTFASSTSSSSAPTTPDYLSDLSVNPCRGFANDDSSSIALSSCDGETSPPSNSKLQFPPKRALQRSQIVLRNRRRLSTPVKRAKRIVRKTPEKSKQLKIKPEADEPNAQDVGNKLAESPTSSTDESRAEESKATEIVNEEQIRKSEAINTAIKEQTKDETMPNEEMKSKAKETIEESDKLREENETETESGTKPEQEMEMEQAVQFEELTSSTEQTQPAVPSPECEVEVSLASNDEQQKSELIVSIPLEALDDELQHKLCNAEAKEGRAEEEGEGEAAVGKENGEIDDVNNNENEHFCRSATADSFNAAVALETKQIEAEPDGGSGGGEGAGGVDDDMPTLESLVELQEKKVDEESEQVVLSVPRITHSSMDFLAEFEKHCEKTLKEHQQKQQQQQPQAPLEPLQLEEAKQQMQVEMNDVESTLHGILNEMQDQHLYTPVCTPIDEFLTPADYAPLPETESAPPTPANASDLYEPATVQQQQQSQQQPQVKDGNLFDSSNFSNELIGFQNDMPCFENIESSPESMAAQQSLQLELTQLLNDLQPPTVINSSSSNNTPQQQQPQLQTQQQQLLPPAQLVPLETTSYDALYPAAPAATPVTAPISPLSDNSASKLQLIQMQPQEPLWQAQAAAAVAAAAAHQTTHLQWSTVGGLEAIKTLPSSNLDNTTTTYYINASDLYQQTNNLTSDSYALLDNNENYILEQQQQQQQQQQQQQQPIMILIQQPELQPVASASNPQQAPLHITYASALGNELHGYQSPQHQQPQQQQQPHQQQQQSSPPPPQRQQQLQLQQQVQNPNQTVLGLPQLVAPPPPRGRPPMLKCRFCQNGPRFASSLEYSRHIIELHPAVAPFNCPHCPQSFAGRSKRNQHILSHHVVQQFHCGQCSQMFPAQRALDLHLQRFHMPLLADAGGDGVRLEEVQLQIATKAQQPSQALQTSPLLAALEQPSPSPSQPRRTRILCCPDCEDCTASVSSHQHRKEQPYEELSNLQPPPTVLTPPSTIASLPSPQPVCPTSHITLPSPEQSEPDSTTATLRHFRKRSVPTSAVSTPTTTTAATTMLMTAASPSSSPSSSTMENSASLQMSKLRGSHQCLVCDKRFTNIIALRKHQQLAHDSQTTMPWVCAICKRGYRKRTDMDNHMKSHEPKGRPYECNKCWVRFPEFKQLAMHKFTVHELIKPHTCDECGKQFGTESALKTHIKFHGERGFQCEECNETFANLKEFRKHRRTHNSELFYKCEHCPRTFLHFTSFRAHMNTHLPLGVFLNDKTTAQLPNKLEHPGNEELLPLTPLSNVHSGGSISEDCPGSVEMVESSMAQSLEMIIDAP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -