Basic Information

Insect: Drosophila albomicans
Gene Symbol: salm
Assembly: GCA_009650485.1
Location: NC:3628794-3641717[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 4.1e-06 0.00025 20.9 0.9 1 23 487 509 487 509 0.98

2 7 8.1e-06 0.00049 20.0 2.1 1 23 515 537 515 537 0.98

3 7 0.014 0.82 9.8 1.5 2 23 927 948 926 948 0.98

4 7 5.8e-08 3.5e-06 26.8 0.5 1 23 954 976 954 976 0.98

5 7 0.00018 0.011 15.8 2.3 1 23 986 1008 986 1008 0.98

6 7 0.024 1.4 9.1 2.9 2 23 1410 1431 1409 1431 0.97

7 7 2.3e-08 1.4e-06 28.0 1.3 1 23 1437 1459 1437 1459 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	4.1e-06	0.00025	20.9	0.9	1	23	487	509	487	509	0.98
2	7	8.1e-06	0.00049	20.0	2.1	1	23	515	537	515	537	0.98
3	7	0.014	0.82	9.8	1.5	2	23	927	948	926	948	0.98
4	7	5.8e-08	3.5e-06	26.8	0.5	1	23	954	976	954	976	0.98
5	7	0.00018	0.011	15.8	2.3	1	23	986	1008	986	1008	0.98
6	7	0.024	1.4	9.1	2.9	2	23	1410	1431	1409	1431	0.97
7	7	2.3e-08	1.4e-06	28.0	1.3	1	23	1437	1459	1437	1459	0.99

Sequence Information

Coding Sequence: ATGACAAACGTTCTGTGTGCAATGCGTAGTGACTTTAAGGATAATCACCAGGAGACCATCAATAAAATGATACAATTTGGTACCGTCAAATATGGCATTGTCAAACAGCTGAAGGATCGCGCTAGAAGTGCCGACAAAGAGATAGCCAGTGATCAAGAGGATAATGGAGCCTGCTCGCCACTGACTACCGCAACGGCAAGCGCAAGTGCGGGCAACAGTCCCAGTCCCAGTCGGAGTCCGCCGCGGCAAAGCGAGGACGAGGCAGAGCGTGAGGTGGACACCTCAGAACCAGGGGCAGTGAGTAAACTGGAACAATTAGATAATTATAATGCCGATAAGGCCATTGAAGATCataatcacaatcacaataacaacaataacaaagtgaTTATGACTAAACCGCCCGTGGAGAACGAGATAGAAGAACACAGTGGCAACTCCGATGCCTCTATGCCACATTCACCCACCGCGGCGACATCTGTGACAGAGGAGGCCGCTACGCAGCCGGCATCCACGGAAAAAAACGTGGACGTGGATGTGGAGATGCAGGAGGACGACGCGCCGATGGCGATTCCCTCATGTGATCAAACCTCGACGACGCAAACAGCGTCTCAGGTGGGCAGTGCTGGAGTTGCAGCTGGTGCTGGAGCAGCGCCTGTTACTCTCGAAGCGATACAAAACATGCAGATGGCCATTGCTCAATTCGCGGCAAAGACCATTGCAAACGGTTCTTCAGGAGCGGACAACGAGGCTGCCATGAAGCAGCTTGCCTTTTTGCAGCAGACGCTCTTCAatctgcagcaacagcaactcttCCAAATTCAGCTGATTCAACAGTTGCAATCGCAGTTGGCCCTCAACCAGGTGAAGCCGAATGAAGAAGATGCTGAGGATGATCTCGAGCCTGAGGAACGGGAGGATGGAGAGACAGATACttatgaggaggaggagcgaATTGCGGATATGGAGCTGCGTCAGAAGGCCGAGGCACGTATGGCTGAGTCCAAGGCGCGACAGCATCTCATCAATGCTGGTGTCCCACTACGTGAACACTCCCGAACTATTTCACCTCCAGCCTCAGGGGAAGCCCTCTCTGCGGATTCCTTGAAGCGCAAACGTGAGGAGGACTCCTGTGTGAAACCACTCAGCTCCAGCATCAAATTGAGTGGGGATCGTACCAGAGAAACGGATAGAAATGGGGAAAGTGCTAAGGATGCACTGTCCAAGCTTaaggaaatggaaaatatgcCGCTACCCTTCGGCTCTGACCTTGCTTCCAGCATCATCACCAACCACGATGATCTCCCCGAGCCAAACTCTTTGGATTTACTGCAGAAGCGAGCACAGGAAGTGTTGGACTCCGCTTCTCAGGGAATTTTGGCCAACAATATGGCCGATGACTTCGCCTTTGGCGATAAGTCCGGTGAGGGCAAGGGCCGCAACGAGCCTTTCTTCAAGCATCGCTGTCGGTATTGCGGCAAGGTATTTGGGTCCGACTCGGCTCTGCAAATTCACATACGATCCCATACTGGTGAACGTCCCTTCAAGTGTAATGTGTGCGGCAGTCGCTTCACGACCAAGGGCAACTTGAAGGTGCACTTCCAGCGACATGCGCAGAAGTTCCCACATGTGCCCATGAACGCCACGCCCATACCAGAGCACATGGACAAGTTCCATCCGCCGCTGTTGGATCAAATGTCGCCAGATAGTTCACCCACACATTCACCTGCTCCAGCACCAAGTCAGCCCGCGACTTCGACGTCAGCTTTGACACAGGCCCAGGCTCAGGCCCAAGCAGCGATGTCGATGACCTTTCCCTCGAGCCCAGCCTTTCCTGGTCTGCAGGGCCTCTACCGCCCTCCCATGGAGCTGCTGAAGTCGTTaggcgctgctgctggcagTTCCGCCGGACTACCCTTCTTTCCCCAAATGCCTGGACTGGGCGCTGCTCTGAAGCACAGTCAGCAGCAGAGTCAGGAGATGCCCACAGACCTGCGAAAGTCCTCAGGCCCCAACTCACCACATGACGAGGAGGAAGACCTGTCGACGGGTCGACTTCCCGTCAAGACAGAGCTGGTGGAGGAAGATAAGCCCGAAAACTTAATGCAGGAACAGACAGCAGAAGAAACCTCTGAGCTGGAGGTGGATACCGAGCCAGAGCCAGAACCACTGCCGCTTGAGGTGCGCATCAAAGAAGAGCGTATCGATGAGGAGCTTGAGCAGGATCAGCAGCGCGGATCACAGTCAGAAGGAATCTCTCGCCGTACGCCGTCGCCTTCAGCCTCGACTGCGGCGCAATCGCCACCTTTGATAGCACGTCAGCATCATCATAGCCACTCGGCGGCTATGCTAGGCTACCCACCGGTGGTGCAACCAATTCAACCAGCAGCCATCATGCATGCGCAGTGTTCGCCTGGCTCACAATCACATCTCGATCAACTGCCGACGCCGGGACAGCTGCCACCAACGATGTCGCATCGGGAGGACTTCTTCGCCGAGCGCTTTCCACTTAACTTTACTACCAAGACGCTATCGCCGGAGCATCACTCACCAATTCGTTCGCCGGCCAACCATGGCCACGCGCATGGTCACGTCCATACCCACGCCCACATTCCCCGATCGCCATTCTTCAACCCGATCAAGCATGAGATGGCAGCGCTACTGCCGCGTCCCCACAGCAACGATAACTCATGGGAGAACTTCATCGAAGTGTCCAACACGTCGGAAACGATGAAGCTAAAAGAGCTTATGAAGAATAAGAAGATCAGTGATCCCAACCAATGCGTCGTCTGCGATCGCGTCCTCTCATGTAAAAGCGCCCTCCAGATGCACTATCGCACCCATACGGGGGAGCGACCTTTCAAGTGCCGTATCTGCGGACGCGCCTTTACCACCAAAGGCAACCTCAAGACTCACATGGCGGTGCATAAGATCCGGCCGCCAATGCGCAACTTCCACCAGTGTCCAGTGTGCCACAAGAAGTACTCGAATGCGCTCGTGTTGCAGCAACACATTCGCCTGCACACAGGTGAACCCACCGATCTGACTCCGGAGCAGATTCAGGCTGCCGAGATCCGCGATCCGCCACCCTCGATGATGCCCGGTCACTTTATGAATCCCTTTGCCGCTGCCGCCTTTCACTTTGGCGCTATGCCCGGCGGCGGACCCGGTGGTCCACCAGGAGCACCGGGCATGCCCGGCGGTCCACACAATGGCACTTTAGGTTCGGAGTCGTCGCAGGGGGACTTGGACGATAATATGGACTGTGGCGATGCAGATGACTTTGATGATGCCTCCTCGGACCATTTGTCAAACAATAACGAATCGGCAAGCGATGATCGACCGCGCTCTGGCGATGACTTCAAGTCGCTACTCTTTGAGCAGAAGCTGCGCATTGATCCCACCGGTGTGGTCAACATTAATAGCCATCAGCGTCCTCGTTCCGCCGCCAGCAATGCCAACTCAATTGGTTCCGTCTCCGCCTCTGCTTCACCTTCCGCTCCCACCAGCCCCAGCTCACAACCCAAGCCCAGCTGCTCCCCTGTGCGCTCTCTTTCGGAAGCCTCTCAGGGTGCATTGGATCTGACGCCACGTGCGGCTCCCACGACGCTAGGCTCCAGCTCTAGCTCGAGGTCACCGCTTCCACTTGCTGCCGAGCGAAAGGAGAAGACCCTCAGCCCGCAAATAGACAGACAGCAACCGCCGCCACGAAGTCCCAATGGTCCGACTTCACTGCTCTCCTCCCCCCTGCCGCCCTCGGTGGGCATCGATTGCCTGCCTCCGGGATTGCAGCATCACctccaacagcagcaccagcatCTGATGCAACAACAAGCCGCAGTggcggctgcagctgccgcccagcatcatcatcatcaaatgCAGCAACATGCCGCCGCTCTGCATCAGCATCAGGAGCAACTCCGTCGCGAAGCGCAGGAGGTGCAGCAGAAGgcggccgcagcagcagcagctgccgcagccGCTGTTCAACGCCAGACATCGCCTCAGCCATCGCCGCGAAGCAGTGAGCCAAGCGGTCCGAGTCCCGCTCAGCCCAATCCCTTGATGGCGGCACGTCCGCCATTCGGCATGTTTCCCAACCTTCCCATCTTCCCGCCGGCGACGACGCAGAACATGTGCAATGCCATGAACCAGATCGCGCAATCCGTGATGCCGGCGGCACCGTTCAATCCGCTTGCACTGAGCGGCGTTCGCGGCAGCACGACATGCGGCATCTGCTACAAGACATTCCCCTGCCACTCTGCTCTTGAGATTCACTACAGAAGCCACACCAAGGAGCGTCCCTTCAAGTGCAACATCTGCGATCGTGGATTCACTACTAAGGGCAACCTCAAGCAGCACATGCTGACTCACAAGATACGAGACATGGAGCAGGAGACCTTCAGAAATCGTGCAGTAAAGTATATGAATGAGTGGAGCGATGACCGCGAATAA
Protein Sequence: MTNVLCAMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSADKEIASDQEDNGACSPLTTATASASAGNSPSPSRSPPRQSEDEAEREVDTSEPGAVSKLEQLDNYNADKAIEDHNHNHNNNNNKVIMTKPPVENEIEEHSGNSDASMPHSPTAATSVTEEAATQPASTEKNVDVDVEMQEDDAPMAIPSCDQTSTTQTASQVGSAGVAAGAGAAPVTLEAIQNMQMAIAQFAAKTIANGSSGADNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLALNQVKPNEEDAEDDLEPEEREDGETDTYEEEERIADMELRQKAEARMAESKARQHLINAGVPLREHSRTISPPASGEALSADSLKRKREEDSCVKPLSSSIKLSGDRTRETDRNGESAKDALSKLKEMENMPLPFGSDLASSIITNHDDLPEPNSLDLLQKRAQEVLDSASQGILANNMADDFAFGDKSGEGKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPDSSPTHSPAPAPSQPATSTSALTQAQAQAQAAMSMTFPSSPAFPGLQGLYRPPMELLKSLGAAAGSSAGLPFFPQMPGLGAALKHSQQQSQEMPTDLRKSSGPNSPHDEEEDLSTGRLPVKTELVEEDKPENLMQEQTAEETSELEVDTEPEPEPLPLEVRIKEERIDEELEQDQQRGSQSEGISRRTPSPSASTAAQSPPLIARQHHHSHSAAMLGYPPVVQPIQPAAIMHAQCSPGSQSHLDQLPTPGQLPPTMSHREDFFAERFPLNFTTKTLSPEHHSPIRSPANHGHAHGHVHTHAHIPRSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTSETMKLKELMKNKKISDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHFGAMPGGGPGGPPGAPGMPGGPHNGTLGSESSQGDLDDNMDCGDADDFDDASSDHLSNNNESASDDRPRSGDDFKSLLFEQKLRIDPTGVVNINSHQRPRSAASNANSIGSVSASASPSAPTSPSSQPKPSCSPVRSLSEASQGALDLTPRAAPTTLGSSSSSRSPLPLAAERKEKTLSPQIDRQQPPPRSPNGPTSLLSSPLPPSVGIDCLPPGLQHHLQQQHQHLMQQQAAVAAAAAAQHHHHQMQQHAAALHQHQEQLRREAQEVQQKAAAAAAAAAAAVQRQTSPQPSPRSSEPSGPSPAQPNPLMAARPPFGMFPNLPIFPPATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMNEWSDDRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00534052;
90% Identity: iTF_00553889;
80% Identity: -