Basic Information

Gene Symbol
Camta1
Assembly
GCA_009650485.1
Location
NC:37226324-37289945[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.2e-49 8.2e-45 150.9 2.2 2 116 428 540 427 540 0.98
2 2 0.084 1.1e+03 -1.1 7.1 5 108 679 782 675 790 0.70

Sequence Information

Coding Sequence
ATGAATCTAAATCTGAATCTAAATCTGCAGCAAACCAACACAAAGAATGGTTTGAGCCGTTTGAGCCTGATCAAATCGCAGAGCAGCGGCAAGCTGAGTCTCAGCAATGAGGTCGATgccacaacaaacagcaaaacgaCGAAAACGACAAGTTTACGCGCTGCCAAACTCAAGATCGAGGCcatgcaacaacatcatcagcaccaacaacagcaacagaagcagagTGCCAGCAACATTATATTGTTGCGTGGCACACGCAATGAAAATGGCCAGATCATCATACAGAACAAGCAGGACATACTTAGCCTGCtcagcgagcagcagcaacagcaacagcagcaacaggataAGGCCACTGCCATAACGCTCAATCAGctgccgacaacaacaactgtggcACGCAAGACCATCGTGCAaacgagcagcaacagcatcaacagctcGAGCAGCATTTCCATAGTCGCCAGCAGTGGCAAGGAGTCCAATACGATACTGCTGCAGACGCCCATCAATGCCAGCCAGCTGGAGAGTGTGCTCAAGGCTCAGAACACGGCGACAACCAAGCTCAATGGCAACGTCAACAACAAGCTGATTGAGCGTCCCTTTATGCTGAAACATGCCTCGCGTAGTCTCAGCTCGGAGAGCAACTGCGACAGCAAGTCACCGTTTGTGCTGCAGACGCTCAAGCGTTTGGAGAAATCACAATCCATTCTGGTCATACGCAATTCCACAACCACAAGCTCAAGCACAGCCATGGCCACatcgccaccgccgccgccacctccgaacagtagcaacagcaacaagaatcACAATggaacacagcagcaacaacagcagcagcagcaacatgtgtTGAATGTGACACGCAACGCTAAGGTGTCCAAGGCGGTAGCTGCCACGTTGCACAAGTTGAAGTCGCCAACGGGtgccacagcagccacagctgcCGCAGCGGGCACAACAACCATACTGCGGTTGAGCAAGAGCgttaacaacagcaacaacaacaagcagctgACAACAACGGCCACAACAACGtcagtagcaacaacagcaaccacaacaacaacggcagcagcagcaacggcaacatcAACGCCAGCAAATAAAGTTGccacaacatcagcaacaacaacggcaacggcaatggaACAACAGCAGACGCCACAAGCgacaatgcaacaacaaacgaatgTGCCACTTGGGAGCGATGGCGAACCTATCAAACTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTTCCATCGCAGCGCCATCGTTGGAATACAAATGAGGAAATCGCAGCGATTCTTATCAGCTTTGATAAGCATAGCGAATGGCAATCAAAAGAAGTCAAAACAAGACCGAAGAGCGGCTCCCTGCTGCTCTACTCCAGAAAAAAGGTGCGCTACAGACGCGATGGCTACTGCTGGAAGAAGCGTAAGGATGGCAAGACGACACGCGAGGATCACATGAAACTGAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTATGTACACTCTGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTATTACAGAATCCAGACATTGTTTTGGTGCATTATCTGAATGTGCCGTATCCGGATGATAATAAAATGGCCGTGATTGCGCCAAGCATAACGCTCTGGGGCGACAAAAAGGAGTGGACCAAAGAGGAGCTGGTCAGCCAGCTGAAGCCTATGTTGTCCACAGTGAATTCGGATGAGGACTCTGACTCGGGCAACGATATAGAAATATCGACGGCTGAGACTGTGGAGTCTATTGTATGCCAGTTGATGGAGAAACAGCGTCTGTCGCGACAGGCAGCTCTAGTCAAGCAACTGGATTGCGGTTGTGGCGATGCAGCCTGTGCCGATGGCAAGACCTGCACGCATCCTGTCATGCGTCGCACGGGCATCGTCAAGTCGGTGTCCGAGAAGCGACCCAGCGATGGTTACAGTGCTGTCAATGGCACGCCTAATGTGGTTGTGGCCAGCAAGCTTTATTCGCGCTGGTCGGAGCGGCATCGGCAGCGAGAGGCGGCCTTGCATATGGAGAATTCCCACGCGCAGTTCCACAATGCCACGCAGCAGTTGCCGCAGGAGTCGGCGATCAAATTCCAAATCAttccgcaacagcagcagcagcaacaacagggaGACGGCAGTAACTATCAGCAGCAATATCGTGGTGCTAATCAGATGTTGGCCACAAGAAGCAATCTGATaatacagcagcagcagcagcaacaacaacaacaacaacagcaacagcagcagcaacatcagcaatatcaacagcagcagcaacaacaacacttgaaCTTACAACGCTTTGTGGCCAGTCATAATCAGAGCAATCAAAGTCATAATCAgaatagcaatagcaacaacaataattcaGCACATTTAAATCATCGCCTGCAAATTGCCAATACaacaatcacagcaacaacacgagAGGCGgtcgcaacagcagcagcaacaataacaacaacaacagcagccgcagcaaccaCCTCAAATGTCATGGATACGGAACTAATTGAAAACCAAAGCCAGCACCTGaccacaaatgcaaataacaataataaaatcagcctcaacaacaataacaattgcaacagcagcagcagtaagcaattaacagcagcagcaacaacaacaaatacaacagcagcagcagcggcatctCAAACAAACAACGATTTAAATGTCGTAAATAATAAtggacacaacaacaacagcagcaataactttatatacaatcagcagcagcagcatgcgAGTGCTACCAGCAATAGCAGtagtagcagcaacaataacaacaaccagcattattataaattgcaacagacaacaacaactacagcagcagcagccaccctcagcaacaacaatcaaccCCCAGTTGAGGCAATGTGCATGTCACCAGAgcatcacagcagcagcgtgggtagcagcagcagcagtatcagcaataacaataacaacaacagcagcaatagcaatagcaacagcaatctGTTGAGAGAAACAACGTCTTCCGCTGGCAACACCCCTTCCACGTCGGCAACAACATCCACCTCGAGTTCCTTACAGTCGATTATCGATGgcaatcagcagcaacaaattgcaacgacaacagcagcaacaacaacatccacaacaacaggagcaggagcagtagcagcaacagcagcaaattgtGATAATTTAATGAGCGCCAATGCCTTGGCAGAGCTGGAGTTGGGTGAGCAAGCGGCAAggagctacaacaacagcaacgacaacagcgtCAACAATCAGGCCACAACGGCCCCCATCCATAATGGTTGTGCAAACTACAGTGCTTCCAGTGATAATAGTAGCCAAATTAGTGCCAGCGATGACAGCAGCTATggcgccaacagcaacagcaacaccaacaacaacaacaatcagaaTAATCAGAGCAATAACAACGAGGAGGAAGCACACACGGAAACGATGAGCTTCTTCAATGAAACGCTGGATCTCTCGCATGAGGACATACAGCGCACTCTCATTGCCAACATGCCGTACAGcaatgccacagcaacaacagctacagcaactgcaacatcaacaacaacagcagcagctgcagtagCAACATCAGCAGTTAGCAATGAACTCAACGGCGAAATAATTGATGCAGCTAAGCAACAGCAGACAATCAGCGTAGAGTCGCCACAGGGCGAGGATGAAGACACCGCCGATGTCTTTGCCAACTTGGATGCCTTCGACATGCTCGTAGAGTTCCCAGAACTCGATCTGGATGACAAGCAGGCGCTGAATAACACGGCACTCGAACAGGAGCACAGTCATGGTCACAACTTGCATGCCACGACATCACACTATCTCGACTCAACGCATTCGCAAGCACAACGAAAGCTGCTCAACATTTGTGACTTTAGTCCCGAGTGGTCGTACACTGAGGGCGGCGTCAAGGTGCTAGTTGCAGGTCCCTGGACCAGTGATGGTGGCTGCTACACAGTGCTCTTTGATGCTCAACCGGTGCCAACGGTGCTGGTGCAAGAAGGAGTGCTGCGCTGCTATTGTCCTGCCCATGAGGCAGGTCTAGTCACTCTTCAAGTGGCCTGCGGCGGTTTTCTAGTCTCCAATTCGGCAATGTTCGAGTACAAGCTGTCGTTGCTGGCCGATGCACCGTTTGATGCCAGCAGCTCTAACGATTGTCTGTACAAGTTTACGCTGCTGAATCGCCTCTCGACCATCGACGAGAAGTTGCAACTGAAAGTAGAGAATGAGCTGGCAACTGATCAGACAGCTCTTTATCTGGAGCCCAACTTTGAGGAGAAGCTGGTGGCTTATTGTCATCGTCTGATGAAGCACGCCTGGAACACGCCGAGCACCGCGGCCAGCTGGAGCGTCGGCCTGCGTGGCATGACGCTGCTGCATTTGGCCGCCGCTCTGGGTTATGCCAAGCTGGTGGCAGCCATGCTCAATTGGCGTGCCGAGAATCCACATATCATACTCGAAACCGAGTTGGATGCACTCAGTCAGGATGTGCATGGTTTTACACCGCTCGCTTGGGCGTGTGTGCGTGGCCACTTGGAGTGCACGCTTCTGCTGTACAAATGGAATCACAATGCGCTGAAGATCAAGACGCAGGCACAGCAAACGCCACTGGATCTGGCCAACCTCAAGGGACACAAGCAGCTGTTGTCGCAACTGTGTCGCCTGGAGAAGGAGCGTTGCCGTAAGCCACATCCACGCGGTGGTCTGGCCAATCTGTCCATGAACTTGCCCATTGAGTCACCTAGCGAGGAATCAGGCTACAGTGCTTACGAGCTGGAGCTGCAGCGTCGCCACGATGGCGTCTTCCTGAGGCCCATTGCCATGCACAGCAATCAAAGTCCGCCGAACAACAGCAGTCGCTATGCAAAACGATCCTCCATTGACAGCGGTATTAATATGGACATGCGCAGCAAGTCTGGCAAACCTCTGCCTAGACTGCATGGTAACTTCGATTGCCACGATAACTACGCTTTGGGAGTGGATTCTCCGCTGGAATCGCTGTCAGCGGGTACCAATTGCTCTGGACTTTTGTCGCCGCTGCGCAAAATGGATTTTGCCTTATGCGAGGTATCCACGGGCGAGTCGAGTCCCATACACGACAAAGACATCATCGATTGCGATGACAATTCGACGAGCGTCACCGATGTTACCATTAACAATGAGCTCAACGATGTAGGGGATTCGGATTCGGCCAAAGTGTTGACGCTAGCGGAGCACATTATTGCCGCTATGCCAGAGCGTATTAAGaACGAGGCGGATGAGATGATGGTCTTGGGCAGTCCTATGACTGAGCCTCTCACCTCGGAATCATCAGCATTGACTGACAGCTTCATGGATCCGCTGCTTGATTCACTGCCGAATACGCATTTTGACAGTGATTTCAGCTTTGATTTTCATGATCACAGCTATCGCTATCACGACGTTAGCACACCTTGCTCCAGCCTTAGTCCAGCGAGCTCGGGACCATTGCAATCGCCGGCCAGTTACTCGATACTGGGCACAGATCCGTCTGTCAGCTCACCAAGTCCGCCACCCTCGACCAAGCAGCTAACCGAGTTTCTGCATGCCTCCAGCATTTCGCAGTATCCATTCGAGGCGGACTTCTCCAAGCTAACGCTCACCGATACCGAGCAACGAGAACTCTACGAGGCGGCCAAGTGCATACAGAAAGCGTATCGTTCGTACAAGGGCCGGCAGAATAAGGAGCGCACAGCTGCCATTGTTATACAGAACTATTATCGTCGATACAAGCAGTATGCCTACTACCGACAGATGACGAATGCTGCTCTGGTTATCCAGCATGGCTATCGCTCGTATCGTCGCAACAAGCGCTTCAAGAAATCGCAGCATACGCCAAGTGGCTTGGGTACTAGCAGCGATCTTGGAAGCGTTAGCAGCAACTCGCAGTGTTTGTCCAGCTTCTACGATCACTACAAGCAGGATCAACAGAGCTCACAGCCCAGCACGCCCAAGGAGACGAGTCCGTCTGGTCCCTTGAAgCGCACCTATTCGCAGTCTACGCAAAATCAGGCTGCACGTAAAATACAACAGTTCATGAGACAATCACGTATCAACATTTGGGATAGCAACTTGACGAGCTTGActacagagagagcgagccgAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTATCAAGGGCAGCAGGAAATGTCAGTTTGTCATAG
Protein Sequence
MNLNLNLNLQQTNTKNGLSRLSLIKSQSSGKLSLSNEVDATTNSKTTKTTSLRAAKLKIEAMQQHHQHQQQQQKQSASNIILLRGTRNENGQIIIQNKQDILSLLSEQQQQQQQQQDKATAITLNQLPTTTTVARKTIVQTSSNSINSSSSISIVASSGKESNTILLQTPINASQLESVLKAQNTATTKLNGNVNNKLIERPFMLKHASRSLSSESNCDSKSPFVLQTLKRLEKSQSILVIRNSTTTSSSTAMATSPPPPPPPNSSNSNKNHNGTQQQQQQQQQHVLNVTRNAKVSKAVAATLHKLKSPTGATAATAAAAGTTTILRLSKSVNNSNNNKQLTTTATTTSVATTATTTTTAAAATATSTPANKVATTSATTTATAMEQQQTPQATMQQQTNVPLGSDGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDEDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDAACADGKTCTHPVMRRTGIVKSVSEKRPSDGYSAVNGTPNVVVASKLYSRWSERHRQREAALHMENSHAQFHNATQQLPQESAIKFQIIPQQQQQQQQGDGSNYQQQYRGANQMLATRSNLIIQQQQQQQQQQQQQQQQQHQQYQQQQQQQHLNLQRFVASHNQSNQSHNQNSNSNNNNSAHLNHRLQIANTTITATTREAVATAAATITTTTAAAATTSNVMDTELIENQSQHLTTNANNNNKISLNNNNNCNSSSSKQLTAAATTTNTTAAAAASQTNNDLNVVNNNGHNNNSSNNFIYNQQQQHASATSNSSSSSNNNNNQHYYKLQQTTTTTAAAATLSNNNQPPVEAMCMSPEHHSSSVGSSSSSISNNNNNNSSNSNSNSNLLRETTSSAGNTPSTSATTSTSSSLQSIIDGNQQQQIATTTAATTTSTTTGAGAVAATAANCDNLMSANALAELELGEQAARSYNNSNDNSVNNQATTAPIHNGCANYSASSDNSSQISASDDSSYGANSNSNTNNNNNQNNQSNNNEEEAHTETMSFFNETLDLSHEDIQRTLIANMPYSNATATTATATATSTTTAAAAVATSAVSNELNGEIIDAAKQQQTISVESPQGEDEDTADVFANLDAFDMLVEFPELDLDDKQALNNTALEQEHSHGHNLHATTSHYLDSTHSQAQRKLLNICDFSPEWSYTEGGVKVLVAGPWTSDGGCYTVLFDAQPVPTVLVQEGVLRCYCPAHEAGLVTLQVACGGFLVSNSAMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQLKVENELATDQTALYLEPNFEEKLVAYCHRLMKHAWNTPSTAASWSVGLRGMTLLHLAAALGYAKLVAAMLNWRAENPHIILETELDALSQDVHGFTPLAWACVRGHLECTLLLYKWNHNALKIKTQAQQTPLDLANLKGHKQLLSQLCRLEKERCRKPHPRGGLANLSMNLPIESPSEESGYSAYELELQRRHDGVFLRPIAMHSNQSPPNNSSRYAKRSSIDSGINMDMRSKSGKPLPRLHGNFDCHDNYALGVDSPLESLSAGTNCSGLLSPLRKMDFALCEVSTGESSPIHDKDIIDCDDNSTSVTDVTINNELNDVGDSDSAKVLTLAEHIIAAMPERIKNEADEMMVLGSPMTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSQHTPSGLGTSSDLGSVSSNSQCLSSFYDHYKQDQQSSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRINIWDSNLTSLTTERASRKREAGAPTQGGIPSKLAVSRAAGNVSLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-