Basic Information

Gene Symbol
dnajc2
Assembly
GCA_009650485.1
Location
NC:1952843-1956115[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.00038 0.31 10.8 0.0 3 31 433 465 431 471 0.86
2 2 2.4e-10 2e-07 30.6 0.1 1 41 581 625 581 629 0.90

Sequence Information

Coding Sequence
atGACAAACAGTCTGCAACTGGAGTGTGGAGCGTTGAAGGTAGCGCGTCATAAAATCGAATGCGTTGGCTGCGCATATTTCAATGCACGCCGCCAAATTGGCGATGCGAGCGGCGTTGAGCGCAGCGATTCCGACGAGAAATTGGCGGGCGCTGGCGAGGATGTCGATATTAGCTACCTCAAATCCCTCGATCCCAAAGAGTGGAAGGATCAAGACCATTATAGCGTGCTCGGCCTTGGAAAATTAAGATATGAAGCGAGTGATGATGACATTCGTCGGGCGTACAGACGCATGGTGCTGCAACATCATCCGGACAAGCGAAAAGCCAAAGGCGAGGAGGTTATTACCGACGACGACTATTTTACATGCATAACAAAGGCCTACGAAATACTCGGCACCGCGAAGACGCGCCGCAGCTACGATTCCGTGGATCCCGAGTTTGACGACAACTTCCCTTCACAGTCGGacatcgacaacaactacTTCAACTCATTTAAcaagtatttcaatttgaacgCACGCTGGAGTGAAAAGCAACATGTGCCGCCATTTGGCGAAGTAGACGCCAAACGCGAGGAAGTCGAACGTTTCTACAACTTCTGGTACGACTTTAAATCATGGCGTGAATTCAGCTACCTCGACGAGGAGGACAAGGAGAAGGGTCAGGATCGCGACGAGCGTCGTTGGATCGAAAAGGAGAACAAAGCAGCGCGCATCAAGCGCAAGAAGGAGGAAATGACGCGCATTCGTGCGCTCGTAGATTTGGCTTACAACAGCGACAAGCGTATCCAGCGCTTCAAGCAGGAGGAGAAGGATCGCAAGGCAGCCGCAAAGCGTGCCAAAATGGATGCAGCTCAGGCACAAAAAGCCGAGGCAGACCGAGCGGTGCGTGAGGCGGCGCTGGCCAAAGAGAAGGCTGAGAAGGCGGAACAGAAGCGCATCGAGCAGATAAGGATTGAGCGCgagcagcagaagaagctgCTCAAGAAGGAGCGCAAAACGTTGCGCGACAAGCTCAAGGATTGCAAGTACTATGCCAAAAACGACAAGGATCAGCTGAAGCACATGGAGGGCACCGAAAAGATATGCGAAACATTCTCGTTGGCCGAACTGCAAACTCTTAACAAGGCCATGGAGACAAAGGGACGTGAATCTTTTGTGGCTGCTCTGCAAACAGCTGAGCGCAAGATTGCCGACGAGCTGGAGGAGCTCAATCTGGCGCAGCAAAAGAAGCAGACAACCAATGGGCAGGCAAACAAAACGCCAGCGGGCGTCAAGGAGGTGAAAAAGGGCGATGTGTGGAGCAATGAGAATGTGCAGCTGCTGATCAAGGCGGTCAACCTGTTTCCCGCTGGCACTGCTCAGCGCTGGGATGTGATCGCGACCTTCATCAACCAGCATGGAGGCGGCGCAACGACTCCCGTGACAGCACGCGATGTGCTCAACAAGGCGAAGGCTTTGCAGCACAGCGATCACTCGAAGAGCACGCTGAAGACGCAGGCCAACGAGGCGGCTTTCCAGAGCTTTGAGAAGTCCAAGAAGGAGGTGCAGACAACGAACGATATTACGCTCGGCGATTCGCCGGCGGAGAGCAGCAAAGAGAATGTCAAACAGAACGGTGCACCACcagtcaacaacaataacaatcagcagcaacaacagcaggagcagcagcagcaagtggagCCAAAGCAGAAtggcgttgctgctgcgccGCCAACCACGAATGGCGTATCCTCGAAATCGTCGTGGACTAAGGAGGAGCAAGCCTTGCTCGAACAGGCAATGAAAACGTATCCAACGACGACGCCCGATCGCTGGGATTGCATCGCCGCTTGCATTCCGAATCGCAGTAAAAAGGATTGCCTGCGACGCGTCAAGGAGCTGGTGGAGTTGGTCAACTCGAAGAAGGAGGCGCAGGCGGCAGTTAAATGA
Protein Sequence
MTNSLQLECGALKVARHKIECVGCAYFNARRQIGDASGVERSDSDEKLAGAGEDVDISYLKSLDPKEWKDQDHYSVLGLGKLRYEASDDDIRRAYRRMVLQHHPDKRKAKGEEVITDDDYFTCITKAYEILGTAKTRRSYDSVDPEFDDNFPSQSDIDNNYFNSFNKYFNLNARWSEKQHVPPFGEVDAKREEVERFYNFWYDFKSWREFSYLDEEDKEKGQDRDERRWIEKENKAARIKRKKEEMTRIRALVDLAYNSDKRIQRFKQEEKDRKAAAKRAKMDAAQAQKAEADRAVREAALAKEKAEKAEQKRIEQIRIEREQQKKLLKKERKTLRDKLKDCKYYAKNDKDQLKHMEGTEKICETFSLAELQTLNKAMETKGRESFVAALQTAERKIADELEELNLAQQKKQTTNGQANKTPAGVKEVKKGDVWSNENVQLLIKAVNLFPAGTAQRWDVIATFINQHGGGATTPVTARDVLNKAKALQHSDHSKSTLKTQANEAAFQSFEKSKKEVQTTNDITLGDSPAESSKENVKQNGAPPVNNNNNQQQQQQEQQQQVEPKQNGVAAAPPTTNGVSSKSSWTKEEQALLEQAMKTYPTTTPDRWDCIAACIPNRSKKDCLRRVKELVELVNSKKEAQAAVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01556055;
90% Identity
iTF_00575513;
80% Identity
-