Basic Information

Gene Symbol
-
Assembly
GCA_009650485.1
Location
NC:2761980-2764965[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 5.3 4.4e+03 -2.5 0.1 22 45 202 227 202 228 0.71
2 5 1.3e-11 1e-08 34.7 0.0 1 39 234 273 234 280 0.92
3 5 0.00013 0.11 12.2 0.0 2 44 290 336 289 338 0.90
4 5 1.2e-05 0.0097 15.6 0.0 2 46 345 390 344 390 0.88
5 5 1.2e-10 9.9e-08 31.6 0.0 3 43 398 439 396 442 0.95

Sequence Information

Coding Sequence
ATGTTCGCAGCGGATAAACTGACGCTGAATCCCCAGCAAATATTAAACGAAATTGTGACACTGCTGGAAACCACAGCCGTGCCAAGTGATGGAAATGCTTTACTGTTGAATCAGGAGATGCAACGTCGTCTCGAGTACGTGCGCACGCGTATTTTGCAACTGTTGAAGCAGGTGCAAGCTCGCTATTCACGCAACGAGGAGATTCTTGTGCGCCGTCTAAAGCCACGTTCTCTCAAATCGCAGAGAGAATCGCTGGCAGCTGATGAAAGCATAAGCTTTACGGGTGCCGTGCTTCGTGGAGGAACGTTTTTTTTCAAGGGCAATTTGTACTTTCGCGATATGCATGGACGCAGTTGTCCCAACAATGAGGACTACGATAGACGCAGTAGCACTGAAATGTTTCCCACTGACTTCGATATGCGCTCTAAGCATGTGTGGACGGTGCTCGATAAAAAGAATATCGTTATGGGCATTAAAGAGCAGCTGCTGTCACATGTTACCTATAATAAAACAGGAAGTCGACCAGGCAAACGCAAGAACATTgatttgcacacacaaacattggCCAGTTTGCTGAGTTCTGTGGATAGCACTTTTAGCATTGACTGGAATGAGATCAGCATTTCGAAATTGGAGCGTCGTCATTCCGCGTACAGCTGTGAAGCCATGTGGTTCGTGTATTTGCATCCACAGCTCAAACGCGACGACTGGACTGCCGAGGAAGATGAGCGTCTCTTAGAGGTGGCTCAAAGCCACAAGCTACAGGATTGGCAAGCTATTGCAAGTGCGGTATCTCAGCGTTCCGACTATCAATGCTTTGTGCGCGTCCAGACTGCATTACGATTTTACTTGGAACCTTTGTGCAGCGTTAAATGGAGTGAACAGGATAATGTTCGATTGCGGAAGATTGTCGAGCGAAATACTGTGAATGGAGTCACTGATTGGCCTCAGGTAGTCGAGCACTTCCCAGGTCGATCGAAATCCACGCTAATTGGACGCTATTTGTATGTGCTGCATCCCAGCATATGTCATGAACCTTTTACGGACAAAGAGGACTTGATGCTGTTCGCTGCCGTCGAAGAGTACAATGGTAAATTTCATTGCTTTCCCCGCACACTCTTTCCAAATCGATCGCTGGCACAGCTACGAACGCGTTATCACAATGTGCTGGCCCAGCGTAACAAGACGGATTCGTGGTCTGTAGAGGATGACAACAAGCTAATGGGATTTGTGAAGTCCCATGGCACCTCGCAATGGGTAAACTGTGCCAGTCATTTGGGCAATCATACACGCACAAGTTGTCGCACACGCTTCATGGTTATCAAGCGGTTCTTGGAACAGCATCCCGATGCAGAAGTCTCCGATATACCTCGACGAAAGACGACAAAAAATGCAGCAGTTACCTCAGAGAATTGGGTGCAACGTTTCCAGGAGTGGCAAGAGGATCCAGACTCATTACTTGACCACTCGGATGTGaggccaaaagcaaagaaaatcaAGCGCGAGCAACTTGCCAATGTGAATAAGCGGCGCGGCATAGATGTTCACATCTATGAGTACTTCAAGTTTGCCTATCATCTCTCATTGCAATCGCCTGCGCCACAAATACCTCTGCCTAGAGAGAAAGGTAAACTGAATGTTGTAGCAAAAGCACTTAGATTTCGACCTGTAACTACTTCAAGTGATAAGCTCGTCGAGAGTATTGCGTTGCCCAAGTATCTATGTCGGTGCTATAGTGAAATGTTAAGTCAACTACCGCCGGCCACTAATGATGGTGTGTCACAAGCCGCGGCCTTGCTGCAACCCAATTGGTCCACGATGATGGGATTCCGATCCATTTGTATATTGTCAGCGCACTGTCGTAAACATGCGACGCAGTCGTCAATTGACTATGACGAATCTCATGCAGCTGTTCAGCTATTCCGACAACGTTTACGTACCCTCTTCTTTCGGACAACGCTGTTAAGTCGTTTGGAACCGTCAATGTTTGAACAACTGCCAGTGGCTTTGATGAGACTACCGCGTCCAGTTGTTAATTATCCCCTGCGCGACACGAGGACACGCGTTGATGCCCCATTACAATCACGTTCAAAATTGACGCCAACTCAAGAACAAGAAACGGCGCGCAGGCAAATTAAGGAATTGGAACCTATGTCGAAGTCCGAGCCAATTGATTGCAAAGAGGAACCTATTTTTAAGGAAGAGTTGTCTATTGATTAG
Protein Sequence
MFAADKLTLNPQQILNEIVTLLETTAVPSDGNALLLNQEMQRRLEYVRTRILQLLKQVQARYSRNEEILVRRLKPRSLKSQRESLAADESISFTGAVLRGGTFFFKGNLYFRDMHGRSCPNNEDYDRRSSTEMFPTDFDMRSKHVWTVLDKKNIVMGIKEQLLSHVTYNKTGSRPGKRKNIDLHTQTLASLLSSVDSTFSIDWNEISISKLERRHSAYSCEAMWFVYLHPQLKRDDWTAEEDERLLEVAQSHKLQDWQAIASAVSQRSDYQCFVRVQTALRFYLEPLCSVKWSEQDNVRLRKIVERNTVNGVTDWPQVVEHFPGRSKSTLIGRYLYVLHPSICHEPFTDKEDLMLFAAVEEYNGKFHCFPRTLFPNRSLAQLRTRYHNVLAQRNKTDSWSVEDDNKLMGFVKSHGTSQWVNCASHLGNHTRTSCRTRFMVIKRFLEQHPDAEVSDIPRRKTTKNAAVTSENWVQRFQEWQEDPDSLLDHSDVRPKAKKIKREQLANVNKRRGIDVHIYEYFKFAYHLSLQSPAPQIPLPREKGKLNVVAKALRFRPVTTSSDKLVESIALPKYLCRCYSEMLSQLPPATNDGVSQAAALLQPNWSTMMGFRSICILSAHCRKHATQSSIDYDESHAAVQLFRQRLRTLFFRTTLLSRLEPSMFEQLPVALMRLPRPVVNYPLRDTRTRVDAPLQSRSKLTPTQEQETARRQIKELEPMSKSEPIDCKEEPIFKEELSID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00553668;
80% Identity
-