Basic Information

Gene Symbol
Ubp1
Assembly
GCA_009650485.1
Location
NC:23313855-23328003[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.83 5.5e+03 -4.0 1.8 123 123 64 64 24 108 0.51
2 4 2.9e-53 1.9e-49 167.5 0.2 24 186 393 552 372 562 0.90
3 4 0.19 1.2e+03 -1.9 0.3 20 30 574 583 556 611 0.43
4 4 3.3e-13 2.2e-09 36.5 1.0 188 222 638 672 631 673 0.91

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTCTTTCGCAAAATTCCGGCCTCTTGGATTTACAAAGCATATTTGATCCACAATATTCattgcaacaacatcaacaacaacaacagcagctacatttaacatcacaacaacaatcatcACAACAACGCACTTCAACGAAATTCGATTTAAGCATCTTTAACGACTTTGACCAAATGgaattcaacaacaatttgagTCGAAACCataatcaatttcaaaataataataatagtataaataataataacagtagCCACAATTCAActaccaccaacaacaataacaacaccatACATACGCACCAGACCAACGGTGAAAATCTGAATCAGGTCCAAAATCGTCATTTTATCAGCGGCTATCATCATCAGCATATTGGATCGGATTATGAGCAAGTGATTAACTTTGTTGACTCACCACCGAATTCTGAGGAATCTTGGACAGACGCACAGTCCAAGGAATCGCCAGGACCCCAAATAATCGACGTTAGAACAATTTACTCCAACAGTGGTTCACGCAAAAGACGAATGGATTGGGACTCATTAGATATCGGTCAAAGTGAAAATTCGCCGACAACACAATCTGGCGACTTACCCAATAAAGTGCAACAGCACGAGAAGGATAAACACAAGAGAGAGAAGCATTCAGGTCGCAGCAGCTGGAGCGACGACATAGGCTTCGATTTGAACGCAGAGTTTAATAGCAACTCATATTTGAACAATGAGAACTTTTTATCGTTCTCCCCGAGCCTGACGGCTCTCAAACAGGAGCCGCAAACGGAGCAGCTCAAGCCAAGTCCCAAGGATCAAAGCACTGGCAattccgctgctgctgctgctgctgctgtggtaaGCATTGGCAAGATCGACAAATCGCCATTGGGCGATGCCAATCATTCTCCGCAGCGTGCTCAGGACACAGCAACGGGGGCAACGGGCAAACATGAGTTGAACTCGGTCAATATTTGTGGCTGTGGCTCGCCGCAGGGTTCGCCAGCCGCAACGGACTTTGAACTGAATTGCAATGCCAATGGAAATGGCGCCGAGAAAGGCAAATCGGCAGCTGGCATTGAGGCCTATGCACAGGCGTCACGCTCGggattgcagcagcagctgagcgTTGTCGAGGAGGCCAAGATAGAGCCATCCTCATCGGGCGGTGCCGCACGTGCAGAGGATAACAAATTCCAGTACATTTTGGCAGCAGCCACCTCGATTGCAACAAAGAACAATGAGGAGACTTTGACCTATCTGAATCAGGGTCAAAGCTATGAGatcaaattgaagaaaattgGAGATTTATCGTTCTATCGTGATAAGATTTTGAAGAGCGTTATCAAAATCTGTTTCCATGAGCGTCGATTGCAGTTCATGGAACGTGAGCAGatgcaacaatggcaacaatcaCGTCCTGGCGATCGCATCATTGAAGTGGATGTTCCGCTCTCATACGGCTTGTGTCATGTGTCGCAGCCATTGAGCTCGAATTCATTGAATACGGTGGAGATCTTCTGGGATCCATTGAAGGAGGTCGGTGTTTACATCAAGGTCAATTGCATATCAACTGAATTTACACCAAAGAAGCACGGTGGCGAAAAGGGTGTTCCATTTCGACTACAGATTGAAACTTATATAGAAAATTCGACGGCAAGCagcggtggcaacaacaataacaacaacaacagcagcagcagctcgagcagcagcagcagcaccagcagcaatagcaacagcagcagcaacaacaacaatggcagtacaacaactagcaacaacaacaacaacactaacaactTAACAATCACTTCACCCGGCACACCCGACAATCGTGCGGCGGGAATTGGTGGCAATGGCGGCGGTGGCAGTAGCGGCAACATTGCCGCACTTGCCGCACTCAACGGCAAACAGGCGGTGCATGCAGCTGCCTGTCAGATTAAGGTATTCAAGCTAAAGGGCGCCGATCGCAAGCATAAGCAAGATCGCGAAAAGATCCAAAAGCGTCCACAGGCCGAGCAGGAGAAATTCCAGCCCAGCTACGAGTGCACCATCATGAATGATATATCATTGGATCTGGTAACGCCAGCGACCACAACAACCGGCTGCTACAGTCCCGAATAtATGAAATTGTGGCCAAATTCGCCGgttcatataccaaaatacgaTGGAATGCTGCCATTTGCGAGCAGCGCATCACCGGCGACCAGCAGCAGTCCAATTGCAATCAATTCAGTGACATCAACAAATTCGCCAACATTGAAACTAATGGATGCCACAAACATGGTATCGCCGCAGCATGTGCCAGCGGATATGGATGATTACAATCAGAACATAATGCCGGAATCGATGCCAGCACAAGTGACACAATGGCTGACCCAACATCGTCTGACGGCCTATCTCACCACTTTTGCCCACTTCTCGGGCGCCGATATTTTGCGCATGTCCAAGGAGGATCTGATACAAATATGTGGACTAGCCGATGGCATACGCATGTATAATATTCTGCGCGCTAAAACAATTGCACCACGTCTGACTCTCTATGCCAGCATGGATGGCTGCAGCTTCAATGCCATCTATTTGCTCTCGAACACGGCCAAGGAGCTGCAACAGAAGCTTTACAAGTTACCTGGTTTCTACGAGTTCATGGCCAAGGGCGGCTCCGCTGGAGGTATGGAGAATGGAGGCGTGGCAGCCGCTGCGCTCTACAACAATTGGGGCATGCATTCAAAGTTCTCCGGCAGCGGGTCGAACATCTTCAATGAGGTGAACAAGAGTTGTGTGTACATTTCGGGACCGTCCGGCGTTCATGTCAGTGTCACCGATGAGGTGCTTAACAATGAGATCAAGGATGGCAGCCTCTATGCATTGGATGTGCAGGCGGGCAAAGTTGTATTGAAATTGATCAATAAGCAGGATAATAAttga
Protein Sequence
MALSFLSQNSGLLDLQSIFDPQYSLQQHQQQQQQLHLTSQQQSSQQRTSTKFDLSIFNDFDQMEFNNNLSRNHNQFQNNNNSINNNNSSHNSTTTNNNNNTIHTHQTNGENLNQVQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTDAQSKESPGPQIIDVRTIYSNSGSRKRRMDWDSLDIGQSENSPTTQSGDLPNKVQQHEKDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKPSPKDQSTGNSAAAAAAAVVSIGKIDKSPLGDANHSPQRAQDTATGATGKHELNSVNICGCGSPQGSPAATDFELNCNANGNGAEKGKSAAGIEAYAQASRSGLQQQLSVVEEAKIEPSSSGGAARAEDNKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQQSRPGDRIIEVDVPLSYGLCHVSQPLSSNSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENSTASSGGNNNNNNNSSSSSSSSSSTSSNSNSSSNNNNGSTTTSNNNNNTNNLTITSPGTPDNRAAGIGGNGGGGSSGNIAALAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQAEQEKFQPSYECTIMNDISLDLVTPATTTTGCYSPEYMKLWPNSPVHIPKYDGMLPFASSASPATSSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYNQNIMPESMPAQVTQWLTQHRLTAYLTTFAHFSGADILRMSKEDLIQICGLADGIRMYNILRAKTIAPRLTLYASMDGCSFNAIYLLSNTAKELQQKLYKLPGFYEFMAKGGSAGGMENGGVAAAALYNNWGMHSKFSGSGSNIFNEVNKSCVYISGPSGVHVSVTDEVLNNEIKDGSLYALDVQAGKVVLKLINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00803364;
90% Identity
iTF_00553522;
80% Identity
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