Basic Information

Gene Symbol
Camta1
Assembly
GCA_037356375.1
Location
CM074799.1:12062905-12071357[-]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-41 6.4e-37 126.1 1.7 19 116 30 125 27 125 0.96
2 2 0.26 5.9e+03 -2.7 0.3 54 96 329 372 288 385 0.62

Sequence Information

Coding Sequence
ATGCGTCTGTGCCACTTGGTGGTTCCTGGCCTGGTCGGGCCTGACCTGACCAGCTTGGTTAAGTGTCAACTGCCGGGGCGACACCTCTTTGACAAGCATTGCGAGTGGCAGTCTAAGGAGGTTCGAACCAGACCCAAGAGCGGATCCCTGTTGCTGTACTCGCGGAAGAAGGTGCGCTACCGTCGCGATGGCTATTGCTGGAAGAAGCGCAAGGATGGCAAGACGACCCGCGAGGATCACATGAAACTGAAAGTACAAGGCACGGAGTGCATCTACGGCTGTTATGTACACTCGGCCATATTGCCCACGTTTCATCGCAGATGTTACTGGCTGTTGCAGAATCCGGACATTGTTTTGGTGCATTATCTGAATGTGCCGTATCCGGATGATAATAAAATGGCAGTGATTGCCCCCAGCATCACTCTGTGGGGCGACAAGAAGGAGTGgaccaaggaagagctggtCAGCCAGCTGAAGCCAATGCTCTCCACAGTCAACTCCGATGATGATTCCGATTCGGGCAATGACATTGAGATATCGACGGCCGAGACCGTGGAGTCGATTGTGTGCCAGCTGATGGAGAAGCAGCGCTTGTCCCGGCAAGCGGCCCTGGTCAAGCAGCtcgactgcggctgcggtgACTCGGGCTGTGCCGATGGCAAGACCTGCACGCATCCCGTGATGCGTCGCACGGGCGGGATCATCAAGTCCGCGGTGGCCACATCGGCCTCAGAGAAGCGACTCAATGAGGGGGCCTTCAACAGCGGCACGCCGAATGTGGTGGTGGCCAGCAAGCTATACTCCCGCTGGGCGGAGCGGCCCCGCCAGCGCAACGATGGCATGCACCTGGACAATCCACACGCACAGTTCCATAATGCCACGCAACAGCTGCCCCAGGAGTCGGCCATCAAGTTTCAGATCATTCCTccccaacagcaacagcaacaacagcagcaacagcatcagcagacgGGACATGGCGATGGAAACTATCAGCAGCAATATCGTGGTGCCAATCAGATGCTGGCCGCAAGAAGCAATCTGgtgatgcagcagcagcaacagcagcagcagcaatatcaccagcaacagcagcaacacttGAGTCTGCAACGTTTCGTGGCCAGTCAGAGCCAGAATACGGGGCATTTgaatcagcatcatcatcgccTGCAAATTGCCAATACAACAATCACGGCCACAGCCAGAGATCCttccacaacagcagcagcagcagcagtagcagtagcaggagcagcagcagcagcagcaggaggaggaagctCCGTCTTAAATGGCATGGATACGGAACTAATTgaaatccaaagccacatgaCTGCAAACAAAATCACAAACTCCGTcagcagcaatggcaatggcagcggcagtggcagcagtgccattgccagtgccaAGCAATTAGCAGCTCAAACGAACAACGAATTAAATGTCGTAAATAATAACGACCCCAGCAACAATAACTTCATGtacaatcaacaacaacaacagcagcaactgaATACTTCCAGCAAcaacacacagcagcagcagcaacaacagcaacattatTATAAATTGCAACAGACATCAGCAACCCCAAACAGTGGCCAACTCCAAACTCAAACACAAACCCCAACCCTTGTCCAACCCCCTGTTGAGGCCATGTGTATGTCACCTGAGCAtcgtagcagcagcaacagcagcaacaacagtgcTTCAACGTCTTCCGCTGTCAATAGCCATaacacctccacctccacagCCTTAGCCCCAGCCACAACCACATCTATAGCCgcatctatatctatatccaCATCGACGTCCGGCACTTCGTCCACCTCGAGTTCCTTACAATCGATTATCGATGGcaatcagcagcaacaaattacAACGACATCGACGGCAGCAACTTGTGATAATTTAATGAGCGCCAATGCGCTCACTGAGCTGAATggagggagcagcagcagcaacagcagcaacaatcagGCCACAGATGGCCATAACAAGAGTCAATCCCAATCGCAGTCTCAGCCTCAAACTCTGAGCCAAAATGGTTGTGCAACATTCAGTGCTTCCAGTGATAATAGCAGCCAAATTAGCGCCAGCGACGAGAGCAGCAGCTTCGGGGCCAACAATCAGAACAACAGCATCCACAGCATCCACAGCAtacacagcagccacagcagcagcagcaacagcagcgaagACGAGCCCCAGGCGGGCAATGCTGCCGAGACCTTGAGCTTCTTCAACGAAACTCTAGATCTATCCCATGAGGATATTCAACGTACACTGATAGCCAATATGCAGTCGTACAATACGGCTGCCGCAGAAGTAGCCACGACAACGATAGAACCTTTAGCAACAAGCGGCGgcaacagtagcagcaacagcaatccCCAAGAAGTGGAGAAGAAACCTCCACTTGGCCATGAAGCCGATGGCGAGCCTGAGGAGGATGAAACAGACGATGTGTTTGCCAATTTGGATGCATTTGATATGCTCGTGGAGTTCCCCGAGCTGGATCTGGATGACAAGCAGGCCCTGAACAACACGGCCCTGGAGCAGAGCTCCTATCTGGGGCAGGCGGCCGCTCAAACACAGCAGCCCCGCAAGATCCACAACATTTGCGACTTCAGTCCGGAGTGGTCGTACACCGAGGGCGGAGTCAAGGTACTTGTAGCCGGACCCTGGACGAGCAGCAATGGTGGTGGCGCCTACACGGTCCTCTTCGATGCCCAGCCCGTGCCCACGCAGATGGTGCAGGAGGGAGTGCTCCGTTGCTACTGTCCTGCCCATGAGGCGGGTTTTGTGACGCTCCAGGTGGCCTGCGGCGGCTTTCTCGTGTCCAATTCGGTCATGTTCGAGTACAAGCTGTCGCTGCTGGCCGATGCCCCGTTCGATGCGAGCAGCTCCAACGATTGCCTGTATAAGTTCACGCTGCTCAATCGCCTCTCGACCATCGATGACAAGTTGCAGCTGAAAACGGAGCAGGAGCCGACGGACCACACGACTCTCTATCTGGAGCCCAACTTTGAGGAGAAACTGGTTGCGTATTGCCACAAGCTGACCAAGCATGCGTGGAGCATGCCCAGCACAGTGGCAAGCTGGAGCGTGGGCCTGCGGGGCATGACGTTGCTGCATCTGGCCGCCGCCTTGGGCTATGCCAAGCTGGTGGGCGCCATGCTCAATTGGCGAGCGGAGAATCCACATATCATACTCGAAACGGAACTGGACGCCCTCAGTCAGGATGTCTATGGTTTCACGCCGCTCGCCTGGTCCTGTGTGCGTGGCCATGTGGAgtgctctctgctgctctaCAAGTGGAATCACAATGCGCTGAAGATCAAGACGCAGGGCCAGCAAACACCACTGGATCTGGCAAACCTTAAGGGGCACAAACATCTTCTGGCCCAGATGTTTCGACTGGAGAAGGAGCGCTGCCGCAAGCCGCACTTGCGTGGTGGCCTGGCTAACCTTTCCATGAACATAGGCGTTGAAACAGAAACGGAGGagtcgcagcagcagaccTACAACAGCTTTGACCTGGAGATTCTCCAAAGAAAGCACGATGGCGTCTTTCTCAGGCCTGGGGCAGTGCACAGCAATCAAAGTCCTCCCAACAATGGCAGTAGGTACTCCAAACGCTCATCCATAGACAGCGGCATCAACATGGACATACGCAGCAAGTCGGGCAAGTCTCTGGCCAGGCTGCACAGCAACTTTGAGGGCCACGACAACTATGCACTGGGCGTGGATTCGCCGCTGGATACGCTGACTGGGACCAATTGCTTGCTCTCGCCGCTACGTAAAATGGATTTTGCCCTGTGCGAGGTATCCACGGGCGAATCGAGTCCCATACACGACAAAGACATCGATGGCGATGACACCTCGACGAGCGCCACCGATGTGACCATAGGCAATgacctggccctggccctggccgaTGCAGTTGTAGGGGACTCGGAtgccaaagtgctgaccctGGCCGAACACATTATAGCAGCAATGCCAGAGCGCATCAAAAATGAAGCCGATGAAATGATGGTTTTGGGCAGCCCCTTGACTGAGCCATTGACCTCAGAGTCCTCAGCCCTGACAGACAGCTTTATGGATCCCCTGCTGGACTCGCTGCCCAATACGCATTTTGACAGCGATTTCAGCTTCGATTTTCATGACCACAGCTATCGGTACCACGATGTGAGCACGCCCTGCTCCAGCCTGAGTCCCGCCAGCTCGGGGCCCCTGCAGTCACCGGCCAGCTACTCCATCCTGGGCACAGATCCGTCTGTCAGCTCACCCAGTCCGCCGCCGTCGACCAAGCAGCTGACCGAGTTCCTGCACGCCTCCAGCCTGTCGCAGTATCCGTTCGAGGCGGACTTCTCCAAGCTGACGCTGACCGACACAGAGCAGCGAGAGCTGTACGAGGCAGCCAAGTGCATACAGAAGGCCTACCGCTCGTACAAGGGCCGGCAGAAGCTCGAGGAGCAGAACAAAGAGCGCACTGCAGCCATTGTCATCCAGAACTATTACAGGCGGTACAAGCAGTACGCCTATTACAGGCAGATGACCAATGCCGCCCTGGTCATCCAGCATGGCTATCGTTCCTATCGCAAGAACAAACGCTTTAAGAAAAGCGGCCTGGGCCAGGGCATGACAGGGGGCAGCGATCATGGCAGCGTCAGCAGCAACTCTCAGTGCCTGTCCAGCTTCTATGACCACTACAAGcaggatcagcagcagcagcatgagaTGGGCTCACAGCCGAGCACGCCCAAGGAAACAAGTCCGTCGGGTCCTTTGAAACGAACCTACTCGCAGTCCACCCAGAATCAAGCTGCCAGGAAGATCCAACAGTTCATGAGACAATCACGCATCAAactacagagagagcgagccgAAAAAGAGAAGCTTGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTATCAAGGGCAGCAGGAAATCTTGGCTTGCCTAGAAAATAACAGTTCTGCccagagcagcggcagcaacaccTATACGAACAGCATCAACAATCTACAATCCAATCAGTGA
Protein Sequence
MRLCHLVVPGLVGPDLTSLVKCQLPGRHLFDKHCEWQSKEVRTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDDDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDSGCADGKTCTHPVMRRTGGIIKSAVATSASEKRLNEGAFNSGTPNVVVASKLYSRWAERPRQRNDGMHLDNPHAQFHNATQQLPQESAIKFQIIPPQQQQQQQQQQHQQTGHGDGNYQQQYRGANQMLAARSNLVMQQQQQQQQQYHQQQQQHLSLQRFVASQSQNTGHLNQHHHRLQIANTTITATARDPSTTAAAAAVAVAGAAAAAAGGGSSVLNGMDTELIEIQSHMTANKITNSVSSNGNGSGSGSSAIASAKQLAAQTNNELNVVNNNDPSNNNFMYNQQQQQQQLNTSSNNTQQQQQQQQHYYKLQQTSATPNSGQLQTQTQTPTLVQPPVEAMCMSPEHRSSSNSSNNSASTSSAVNSHNTSTSTALAPATTTSIAASISISTSTSGTSSTSSSLQSIIDGNQQQQITTTSTAATCDNLMSANALTELNGGSSSSNSSNNQATDGHNKSQSQSQSQPQTLSQNGCATFSASSDNSSQISASDESSSFGANNQNNSIHSIHSIHSSHSSSSNSSEDEPQAGNAAETLSFFNETLDLSHEDIQRTLIANMQSYNTAAAEVATTTIEPLATSGGNSSSNSNPQEVEKKPPLGHEADGEPEEDETDDVFANLDAFDMLVEFPELDLDDKQALNNTALEQSSYLGQAAAQTQQPRKIHNICDFSPEWSYTEGGVKVLVAGPWTSSNGGGAYTVLFDAQPVPTQMVQEGVLRCYCPAHEAGFVTLQVACGGFLVSNSVMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDDKLQLKTEQEPTDHTTLYLEPNFEEKLVAYCHKLTKHAWSMPSTVASWSVGLRGMTLLHLAAALGYAKLVGAMLNWRAENPHIILETELDALSQDVYGFTPLAWSCVRGHVECSLLLYKWNHNALKIKTQGQQTPLDLANLKGHKHLLAQMFRLEKERCRKPHLRGGLANLSMNIGVETETEESQQQTYNSFDLEILQRKHDGVFLRPGAVHSNQSPPNNGSRYSKRSSIDSGINMDIRSKSGKSLARLHSNFEGHDNYALGVDSPLDTLTGTNCLLSPLRKMDFALCEVSTGESSPIHDKDIDGDDTSTSATDVTIGNDLALALADAVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSLSQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRKNKRFKKSGLGQGMTGGSDHGSVSSNSQCLSSFYDHYKQDQQQQHEMGSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQYQGQQEILACLENNSSAQSSGSNTYTNSINNLQSNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00603331;
90% Identity
iTF_00517694;
80% Identity
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