Basic Information

Insect: Drosophila affinis
Gene Symbol: JARID2
Assembly: GCA_037356375.1
Location: CM074802.1:44092456-44101001[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.7e-22 4.7e-19 68.9 0.0 6 89 1969 2050 1964 2050 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.7e-22	4.7e-19	68.9	0.0	6	89	1969	2050	1964	2050	0.93

Sequence Information

Coding Sequence: ATGGTTGTCTCAAAAGACAACAAGCGTCGCCGCAAGGAGACCGATACTCCGCCACCAGCTGCCGCGGCAGCGTCCGCGGcatccgctgctgctgctgctgccgtggaGTCATCACCCGAAATGCCCAAGAGAACCAAGGTGCAGGCCCAGCGTAAGTTCGCCCAGGGCCAGAGTGCGCCCAGCAGCTCGTCGAGTGGCATGGCATACAGCAGCGTCGTGGCAGCAGCGTCTggagcgggagcaggaggCACTGGTCCGAGCACTTCGGGTGCAGAGAGCTCGCAGCCGCCCATCGAGATACTGCCCAATAAGTGCCCCAAGCCGCAGGATTTCCTCACGTTTCTGTGCTTTCGCGGCACACCCGCTTTGCCCGCACATCTCGACTATCTGAATCAGGGTAAATCCAAGGATTCCAAAGAATCCGAGCCCACATTAccgggcaacaacaacaacaacaataacagcagcagcaagaaggcCCAGAACAGTCGAGCGGtcaacaacaagaagaaaCGTGGCAGGCCGGCCAAGGGGGGAGCGGCcgcaacgaaaaaaaaagacgCGGAGGTTGAGCCGCAGCCACCAGCGGGGGCTGATAAGTCATCaacagcagttgcagcagcagcttcagcagGAGACAAAGCAGCAAGTGATAAACCCAATCTCATACCAGCAGCAGGGGCTCCAACGACAGCGACGACCTCACTGCTTCCCGGAGCTGTACGGAAGCGAGCCGAAGTTGTTACCGATGGCAATCGACGtggcggcaggggcagggcagcacCTGAGAGCAACAGTAACAGCCTGGGTGCTGCCACATCGTCATCCGCTGCAGCAGACACCAATAAGCGTCGTTCCAACCGTTCCAGCACCAAGGAGAGCAAGGCCATAATCGATGAtcaggcggaggaggagcatgaggatgaggaggatgatgatgaatATTTTTCAGCCCATGATGCCACCTCCCGCAATGGGGACGAGGCCTCGAAGGAGGGCCCAGCGAAAGCCGAACCAGCCAAAAGGGGGCGAaacgcagccgcagcagcagcagcaaagaaacCATCATCGGAGCCACCATCCGTTACCGTTGCGGAGGTTGCGCTCAAGGAAAAGGGCCCCGCGAAGCGTTTAAGGCAACGGGAATCACCTATATTCATACCCTCGCCAGAGTCCTCAGGCCGCATGACGCGGCAGCGGGCTTTTTTCGAGCCCGTCAAAGTGCCACCCCATCAAGAGGAGCCAGAAAAGGTAAAAGAAGActgcaagaagaagaaggagaaggatcCAGAGGTGGCCAAGGAACCAAAGGGAGCGCAGTCGCAGCCGGAACCAGAACAGGAGCCGGCCAAGCAGCTGAAGGAAACAAAGGAGAAGACAAATTCTAGTATTTATGCCAAAGAAgccaagcagaagcagcaacagcagcagctggagaacGGCGACAGCCAGCACGGCGCCGGCAGCAAGGGTAAAAAGAGTTTGAACGTCTTCGACTTCAGTTCCGACGATGAGCAGCCGCTGGCCAAGTCCATTAAGCTGAAGAAGGGCGCCAAGGGGCCCAGTCCCAAGAAGGGGAATGCCGCGGTGGCTCCTCCACCAGCCAGGAGTCGCAAAGCAGCCACCAAGAAGCAGGACAAAGAGAAGGAAAAAGAGGAGGAAAAGGAGAAAGAAGTTGCGGTGGCAGCAACACTCGCAGCGACATCGGAGCCAAACAAACGCGGAGCGGCCAAGGCGGGAAAAAAGAAAGCCGAGGACCCACCGGCCGATGAACAGGACCTGGCGCCCCCCTGCCCAAAGAAAGCCACGACGAACGCCCGCCCAGGACGAAAGACAGCCAAGAGCAAAGCCACAGCGGAAGAAGCAGCCGCTGCTGAGGTggaaccacagccacagcgcTCGCAGCGGCCCTCGAGGAAGACCAAGGAGGCAGCGGCCATATACATGGGCATCATTGGCCACAAGCTGCAGATGGCCgacgacgatgaggatgaTCTGTCGATGGACAGCTTCCCGGACATTCCCAACGTCAAGGAAATGGAGAAGATGGAGAAGGAGATCAAAAAGAATGCGGCGGGAAAGTTGAACGTGCCCGAGGCAACGACGGTGCCAACGGCAGGTAAACAATCGCGAAAGCCGTCGCCCAAACCACCTCCAAAgggggaagcagcagcagcacctccaACATCTGCTGCGACAGTAGTGCCCCGAGCAGATCCGCCCTCCCCACCCGagttggaggaggagaagccACCGCCTCCGGCAAGACGTGGACGACCTCCAAAGCAGGGaaaggcagcagctgctgctccggcaCCTCCCGCCAAACCTCCTATCGAGGGTATGCTCGTGAAGAAGGGCTCACTGACGAAGATGAGCGAACAGGCTAAGCCCAAAGCCAAGTCCGAACAGTCAAAAGTCGACTCCGACGAGGAGGAAGACTTTCTAATCAACGAGGAGCTGAACGAAACGAAGCGCAACCTGGAAAAGAGTTTCAGCGACTCGGATGACGAACCACTGGCCATCAAAGTGCCGTGTGTGCCCAAAGGTGGCAGCCAGGAGAAGGATAGTCCATTGCCAGTGGCCGCCAAGCTATCAGCCACCACACCCCACCGACCATCAGCAAAGCTCCAGTCTGCAGTCGTTCCATCCGTCGCCACAGCGACGACTTCAGCGTCGGTTCTACCATCAGTGGTCGTCCAATcgatgcagctgcagctccaggcGCCCAACATTGCCCCCTTGATCACACAGCAGCTGTCGATGCTGCCGCTGACCACCAAGCCAACGACAACGCAagcggcaacgacaacgactacGCCAGTGGTAACGCCAGTGGCAACGCCGGTGGCAACGCCAGTTGCAACGTCAACGCCAATGCTGACAacactgcccctgcccagTGGCATCCAGGTGACAACAGCATCCAATTGCATCTCCATTCCCCCGCTGAACTATACCCCGCTAAAGACGATGGAGAAGAAGTCGCCGGTGCCGACATCAAAGATTCTCAATGTACCCGCCACTTATGCCCTACCCGGAGGCAGTGCGGCCGCCGCTGTAGCAGTGGGATTCCAAAAGGCAACATCGTATCTGCCGCAGGCATCGCCGCATTACCATTCCGGTTATGTGCGTCCCCCACCGACGCCCTCACATCCGTTTGGCTCTGGAGGAGGCGGTGgcggaggagtaggaggaggaggaggaccgTCTGGCAGCAAGACTCCTGCCCAGGGATCGCCAATGAAATACCAGACACCGCCAACAACCTATCCACCACCCATTGAGGCTTACCAGTGCCCCAAGATTAATCCAAACTTTCTCACGCCCAAATACGAGCGGAGTCCCCTGCCACCACGATCCTCGGCTTCGAGCAACTTTCCTACACCCTCACCGGTGAAGTTTTTGCCAACTCCAACGTCCACGACGGTGGGCACCGCcacgggcacaggcacaggaaCAGGCACAGCTACAGCCCCCTCGTCGGCCACCAAAAGCCCTCTGGCACCTCCAACGACACCTGCCACGCCGCCAGTCGTTGCAtccaccagccagccagcagtagTGTTACAGACGTGCAGCCTCAGTTTGAGCACTGCAACAGCCCCGACGCCCAGCTCGGCACCGGCTCCGCCATCGGCGCCGCCGTCGGCACCGCCAGTGGCCTCCACGTCTGCGGCAGCTGCACAGCAGCAAGccagcgcagcagcaggaggagccgTTCCAACGtcaacgccaacgccaccgCCTGCCCACAGTAACAGCAATGCAGGGGCCGCAGTGGCTGGCGGCAGTGGCGATCCATTGAAGGACGAGATTGGCAGCATACTGGCGCAGGCCACTCTGATGCCCAGCAAGGAGGAGTCTGGGAAGATCTTTGGGATAGCCAGCGTTAGCCTGGCCCAGAGTTCCGGCCCCGACAACACCAAGTGCACGCTGGGCAAATGCGGATCGATCCACAAGCCTGTTCTGGGGCCAGTGGTGCCCACCGAGGGATATTTTGGGGATCAGCTGACCAGTAAGGAGCGGCGTAAGGCCAAGGTGAATATGACGCACGAGCAGATACAGAAGTGGCTGATGGAGTGCTCCTCTAATCCGGATGAGATACTCCAAGACGATCTGGACGATGATTTTGATGACAATATGCGGGTGCAGCAGCCCACCACGCCGCCACCCACGCGGGACGAGAAGGAGCTGAGCGCCAGCTTCTCATCCTCGTCGAAGAACACCCGGGGGGGAGATCTCGGCAAAAGCGAGAGCGCCTGGTCAGCCAAGGGGCCGTCGTTGAAGGCCACGCCCGTTGTGGTGACGGCCTCCAGTCGCAAAGAGCAGGCGCAAGCCGACTGTGATGTCCTGGACGGCGAAAAAACATCGACGCCCGTGAATCTCACACAGAAATCGGAGCCAGCGACGGACAAGACAGCGACGGACAAGACTGCGGCTGCTGACAAGAAATCCGCGATCGAGCGAAAGCCCAAGGAAACTGTCCGAACCAGGGCCCCTCCTCAGGCGCGCAGTGCTGCTACCACTCCTTCCACTCCAACTCCCACTCCTGTCACGCCTACCAAGAGCACACCACCAacaccgccgccgcctgccagcagccagcagaaaggaaacaaggggaaaaagaatgccacagcagcagcagcagtgtctCCGCCGCCTCCACCGCCACCCACTCCGCCCACGCCCAAGCGGACGCCAGTGTACAACCAGAAGGCAAACAAGGCGACGGCCCAACAACAGGCAGAGACGAAGCAGCCGCCACCAGTGGCAGCATCGCCGAGCGTGCCAGCGAAGCGAGGAAGCGAATCTGTGTATGCCTTCGGCAAGGAAGAGGAGACCCCAACGGGGGCCAAGCCAGGCAATCGCCGCACCCGGGTGGAGCCGGCGCCGACGCCAccgccagcagctgcagcaccagTGCCGAATGCATTGAGTGAGCGGTCGCCGACCAAGAAGCGGgcggcagccgctgcagcggccACTGCCGTCCAACTGACGCTTAGTCCCACCGAAAACTGCAAGATTGAGGGATCGAAACCCAAGACGGGACCGGGAAGGGCAGCcaagaagcaacagcagcaggtggCTCCACCTCCGCCAACGTCAGCAGTGGAGCCGAGTGGTGACTCGGATCCCGAGGGAGCCACTTTCTACATACCCCTGCAGGGAGCGGGTGTCGGTGGCAGTGGCGACGGTGGCATCCAGGGAGTGGCCGTCAAGCTGGGACGCGAGGGTCCCGATGGACCCAACCAGAAGGTGGTGATGCAGGCCACGCTGGTGACCAAGGCCCAGATGGACACCAATTCGAAGCCGCTGCCCGAGTCCCTGAATACGAATGAGCTAGTGAAGACGCTCTTCCATGCGGCATCCAACAATGATGCCGCCTCCACAACTAGCCTGAAGAGCCTGCCCAAAGCCAGTACCTCAActgcagctggaggaggagtcGCAGGCGCAGGTGCAGTTGCAGGCGTAGGTGCAGGCGCTGGCGGTGCCTCGTCGAGTCTGGTGCGTGTCAATTCCAATTCGTCACTCTTCTCGGGCTCCGCCAAGTCGCGGACAGCGGCCcagaccagctcaacagctgcggctgtggccaaaaagtaCAAGGATGACACGCCAATCAAGATGGCCAACAATACGGCCTTCCCCCGGCACGACGATCCCACCCAAATGGTGGAGGCACCCATATTCCGTCCGACGGAGAAGGAGTTTGCCGATCCCATCGAGTTCATTGAGCGAATCACACCGATTGCGGCCAGATTTGGCATCTGTAAGATCATTCCACCAGCTAGCTTCAAGCCAGAGTGTCGGATATCGGATGAGATGCGGTTTACGGCGTACAATCAGTACGTGCACAAGATGCTGCATCGGTGGGGGCCCAGTGCCAAGGAGTTGAGTGCCATCAAGAAGTACCTGGCCACCCAGAGCATCACGATGAATCATCCGCCCTGGATTGGGGGCATGGAGGTGGATCTGCCGCGGCTCTATCACACCGTCCAGGAACTGGGTGGCCTCAAGGAGGTCATCGAGAAGAAGAAGTGGTCGCGTGTGGCCGAGGAAATGTGCATACCGAAGCTGGCCCAGGACCGGGTCACCAAGCTGGATGACATCTACTGCAAGTACCTGTTGCCCTACGATACCCTGTCGCCGGCCGAGCGCCAGAAGCTCTTCGACGAGGTCGAGGCGGACTGGGCCAAGCGggaggccagagccagacggAATGCGGATCGGTTTGTCAACACGGAGAGCGTCTCGAACGAGGAGGATGACCTGAGCagcgatgaggatgaggagtcGGAGGAGGAGATCGATGGCGTGTCCATGGAGTGCATTGTCAAGGGCAGGAGCATGCCCCTCAGCCAGTTCTATCGCATAGCGAGGAACACGATGGCCCTGTGGTTCAAGAGTACCGATCCCACCGTCAACGAGGTGGAGGCCGAATTCTGGCGCCATGTCGCCGTCCGTGACAGTCATGTGTGTGTCCATTCGGGATCTATCGACAGCTCTGGCTGGGGCTATGGTTTCCCCAGTCCCGGTCCTAAGGGCAAGGGCTCAAACTATGCTCGCCATCCGTGGAACCTCAAGGTTCTCACCAACAATGCTGGTTCGGTGCTGCGTTCGTTGGGGCCCGTAATGGGCGTCACAGTGCCCACCCTCCACGTTGGCATGCTCTTCTCGGCGTGCTGCTGGTACCGGGATCCCCATGGTCTTTCCTGGATTGAATACCTCCACACGGGTGCCTCCAAACTGTGGTACGGCATACCCGATGATCAGAGCGCCAACTTTAGATCCGCCCTCACGTCGCTGATCCCCACCCACTGCCAGAACAAGACCATTTGGCTGCCCTGCGACACGGTGATGGTTCCCCCGCACATGCTCACGGATCGGGGTGTGTCTCTGTGCCGTATCGAGCAGAAGCCGGGCGAGTTTATTGTGGTCTTTCCCCGGGCCTACACCTCCAGCCTGGCCACCGGATACGTGGTCTCCGAGAGTGTTTATTTCGCCACCATGTCGTGGTTGGATTTGGCCAAAGATGATTTCAGGGACATCCATGAGAGCTGCGAGCCAGCAATGTTCTCGCTGGAACAGCTACTGTTCGCCCTGGGCTATGACCAACGCGTCAATCCCGATACCCTCCACCAAATGCTGCCCATGCTGAACGAAGTCTGTGAGAAGGAGTCTGCAGCACGAGAGCAGCTTAGAGCCGCTGGCGTGACATCCACCGAAAAAGTTCAGGCAGAAAAGGGTCAAAAGGccaagaagcagcaacagccgccgCACAAGTCCATCGAAAGTGAATGCGATCTCTGTCGTGCCAATCTGTACATATCCATGGTGCGCACCGACGACGGCAACGTCTACTGTCTGCAGCATGCCCTAAAGAACCTCAACAACGGCAACATCCAGGCGAAGCAGTGCAAGCTGATTTACGCATACAACGTGGACGACATACAGCAGTTAATACGCCAGCTGCAGGAGAAGATAACCCACAAGGCGGCCGTGAAGAAAAAGTAG
Protein Sequence: MVVSKDNKRRRKETDTPPPAAAAASAASAAAAAAVESSPEMPKRTKVQAQRKFAQGQSAPSSSSSGMAYSSVVAAASGAGAGGTGPSTSGAESSQPPIEILPNKCPKPQDFLTFLCFRGTPALPAHLDYLNQGKSKDSKESEPTLPGNNNNNNNSSSKKAQNSRAVNNKKKRGRPAKGGAAATKKKDAEVEPQPPAGADKSSTAVAAAASAGDKAASDKPNLIPAAGAPTTATTSLLPGAVRKRAEVVTDGNRRGGRGRAAPESNSNSLGAATSSSAAADTNKRRSNRSSTKESKAIIDDQAEEEHEDEEDDDEYFSAHDATSRNGDEASKEGPAKAEPAKRGRNAAAAAAAKKPSSEPPSVTVAEVALKEKGPAKRLRQRESPIFIPSPESSGRMTRQRAFFEPVKVPPHQEEPEKVKEDCKKKKEKDPEVAKEPKGAQSQPEPEQEPAKQLKETKEKTNSSIYAKEAKQKQQQQQLENGDSQHGAGSKGKKSLNVFDFSSDDEQPLAKSIKLKKGAKGPSPKKGNAAVAPPPARSRKAATKKQDKEKEKEEEKEKEVAVAATLAATSEPNKRGAAKAGKKKAEDPPADEQDLAPPCPKKATTNARPGRKTAKSKATAEEAAAAEVEPQPQRSQRPSRKTKEAAAIYMGIIGHKLQMADDDEDDLSMDSFPDIPNVKEMEKMEKEIKKNAAGKLNVPEATTVPTAGKQSRKPSPKPPPKGEAAAAPPTSAATVVPRADPPSPPELEEEKPPPPARRGRPPKQGKAAAAAPAPPAKPPIEGMLVKKGSLTKMSEQAKPKAKSEQSKVDSDEEEDFLINEELNETKRNLEKSFSDSDDEPLAIKVPCVPKGGSQEKDSPLPVAAKLSATTPHRPSAKLQSAVVPSVATATTSASVLPSVVVQSMQLQLQAPNIAPLITQQLSMLPLTTKPTTTQAATTTTTPVVTPVATPVATPVATSTPMLTTLPLPSGIQVTTASNCISIPPLNYTPLKTMEKKSPVPTSKILNVPATYALPGGSAAAAVAVGFQKATSYLPQASPHYHSGYVRPPPTPSHPFGSGGGGGGGVGGGGGPSGSKTPAQGSPMKYQTPPTTYPPPIEAYQCPKINPNFLTPKYERSPLPPRSSASSNFPTPSPVKFLPTPTSTTVGTATGTGTGTGTATAPSSATKSPLAPPTTPATPPVVASTSQPAVVLQTCSLSLSTATAPTPSSAPAPPSAPPSAPPVASTSAAAAQQQASAAAGGAVPTSTPTPPPAHSNSNAGAAVAGGSGDPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEGYFGDQLTSKERRKAKVNMTHEQIQKWLMECSSNPDEILQDDLDDDFDDNMRVQQPTTPPPTRDEKELSASFSSSSKNTRGGDLGKSESAWSAKGPSLKATPVVVTASSRKEQAQADCDVLDGEKTSTPVNLTQKSEPATDKTATDKTAAADKKSAIERKPKETVRTRAPPQARSAATTPSTPTPTPVTPTKSTPPTPPPPASSQQKGNKGKKNATAAAAVSPPPPPPPTPPTPKRTPVYNQKANKATAQQQAETKQPPPVAASPSVPAKRGSESVYAFGKEEETPTGAKPGNRRTRVEPAPTPPPAAAAPVPNALSERSPTKKRAAAAAAATAVQLTLSPTENCKIEGSKPKTGPGRAAKKQQQQVAPPPPTSAVEPSGDSDPEGATFYIPLQGAGVGGSGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLPESLNTNELVKTLFHAASNNDAASTTSLKSLPKASTSTAAGGGVAGAGAVAGVGAGAGGASSSLVRVNSNSSLFSGSAKSRTAAQTSSTAAAVAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSITMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWSRVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDLSSDEDEESEEEIDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNPDTLHQMLPMLNEVCEKESAAREQLRAAGVTSTEKVQAEKGQKAKKQQQPPHKSIESECDLCRANLYISMVRTDDGNVYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKITHKAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00517499;
90% Identity: -
80% Identity: -