Basic Information

Insect: Drosophila acutilabella
Gene Symbol: -
Assembly: GCA_035046005.1
Location: JAWNOK010000095.1:591906-593899[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 2.5e-05 0.002 18.7 0.4 1 23 437 459 437 459 0.99

2 6 0.0065 0.5 11.1 0.7 2 23 472 493 471 493 0.96

3 6 1.3e-06 0.0001 22.7 1.0 1 23 499 521 499 521 0.99

4 6 1.9e-05 0.0015 19.1 5.8 1 23 527 550 527 550 0.97

5 6 0.00076 0.059 14.1 6.5 1 23 557 579 557 579 0.98

6 6 8.5e-06 0.00066 20.2 0.3 1 23 584 607 584 607 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	2.5e-05	0.002	18.7	0.4	1	23	437	459	437	459	0.99
2	6	0.0065	0.5	11.1	0.7	2	23	472	493	471	493	0.96
3	6	1.3e-06	0.0001	22.7	1.0	1	23	499	521	499	521	0.99
4	6	1.9e-05	0.0015	19.1	5.8	1	23	527	550	527	550	0.97
5	6	0.00076	0.059	14.1	6.5	1	23	557	579	557	579	0.98
6	6	8.5e-06	0.00066	20.2	0.3	1	23	584	607	584	607	0.95

Sequence Information

Coding Sequence: ATGTCGGCCACAGATGAAATATATCCAGATATAGAAGCATGGTGCCGCCTTTGCTTAAAGGAACACAAGGACGCGTATACAATTTTCGCCGAGGACGACTCACAATTGTCGGTGCCGATGCGCTTGATGGCGTGCGTCTCGCTTGAGGCCAAGCCAACGGATGGTTTGCCGAAAAAGATTTGCGGCGAGTGTCGTTACCAGCTGGAAAAATCGTTTCTATTTCGCCAACGTAGCCAAGCGGCGGACAAGAAGCTACGCAAACACAATCGCCTTGTCGGCATGGGTAAGAAGAGCCGCGTCTTTGCCAAGTCCTCCGACAACGAATCTGATGAGGACGAACTGGAGTTTGAAGAGTCAATTGAGTTTATAAATAGACTAGAAGAGATGCGTGAGAAGAGCTCACAAAAATGGCGGGAAAAATTCAAGGAAGaacaagagaaagagatgttaACGCGCTTGGATTTGATGCGAGATGAGCTAAGAGGTGAAATTCGCAAAGAGCTAATGGAGGAAGTGCGCAGTGATGTACGCCATCAACTGCATGACGAAGTGCAGGAGGAGAGCCGCAAGGAACAGCTTGCCAAGCTATTGGGCGAACTAGAAGTCTTCTTGGATGAAAAGAAAGCAGGTCTCTGGGAATCTCTAGAAGAGGAACCAGCCAAAGCCAAGCAAAATACCAAGTCACCAGCGGTGGCATCCAACACATTGTCTAAGCTAAACACCGATCAGCGAGCAACCCGAAAGCGTGGGCGTATCAATTCGCCCATAGTACCAGCAAAGCGTAGACAAAACACATCGGAAACGGAGACAACCGAATATGAGTTGCAGAGCGCAACCAAAGTGGAACCATTGTCCACAGATGATGTCGAAACGGACACTTCACCCACCGACACCACGTCAAATTTCAATGATGTGAAAATAGTGGACTCCGCCGATGTGGTGACCACTGAAAGTGGCGAGATTTACATCATAAATGCTGGACGTAAAACCAGTGCAACGCCGGCAACATCTATAGATTATCAGCAGGACAAGAATATAACCTCCTACAACATACGGGATAATGGAGAGATTCAGTTTACGGACAACAAATCGGAGGATTTAAGCGATGTGGTTGTGTTTGATTTGGATCCCGAGATCGGCGATGATCAGCAGCTCTACGAACTAAACGATGTCATCATACTGTCGAATGAGAAAGCAAATAGCGAGAACTTACCCACTGCGCGGGAGAAGAAAAACGATTTTGTGGTGAAGCAATCGCCACGTAATGCTCAACCCACCGTTGGACGTGCCAGCGATACGCTGAAATCATTTCAATGCCAATTGTGTCCGATAGCATTCGGCACATCCAAGTCGCTGTCGCGTCATCTCAGCACCCACATCAAGACCATGAAAAACGGCACGGGCGGAGCACTCAAGTGTCCCGTTTGCCAGCTGCAATTGTCCTGTGCCAGTTCACTTAAGAGGCATATGATCATACACACTGGCCTCAAGCCATACAAATGCGATGAATGTCAGCTCTCGTTCTCACAGCGTGAGGTGCTCAAACGTCACatggacacacacacgaaGGAGAAGCGACATCAGTGTCCCCATTGCACGGCCTGTTTTGCCCAAAAGACCAATCTGCAGCAGCATATCAATCGGATGCACACGGAGGGTGAGCGTCAACACAAGTGTCATCTTTGCCAGCGGACCTTCAATCATGTTTCGGGTCTGAGTCGTCATCTGGTCACACATGCCGGAGTCACGTTCGCCTGCAAGGAGTGCGGACGACAGTTTACTGATCGCAGTGCGGTGCAGCGACATGTGCAGAATGTGCACAAGATTAAGGACAACGACGATGCGGAGGGCAATGAAAATGATGCAGAATTTATCTAA
Protein Sequence: MSATDEIYPDIEAWCRLCLKEHKDAYTIFAEDDSQLSVPMRLMACVSLEAKPTDGLPKKICGECRYQLEKSFLFRQRSQAADKKLRKHNRLVGMGKKSRVFAKSSDNESDEDELEFEESIEFINRLEEMREKSSQKWREKFKEEQEKEMLTRLDLMRDELRGEIRKELMEEVRSDVRHQLHDEVQEESRKEQLAKLLGELEVFLDEKKAGLWESLEEEPAKAKQNTKSPAVASNTLSKLNTDQRATRKRGRINSPIVPAKRRQNTSETETTEYELQSATKVEPLSTDDVETDTSPTDTTSNFNDVKIVDSADVVTTESGEIYIINAGRKTSATPATSIDYQQDKNITSYNIRDNGEIQFTDNKSEDLSDVVVFDLDPEIGDDQQLYELNDVIILSNEKANSENLPTAREKKNDFVVKQSPRNAQPTVGRASDTLKSFQCQLCPIAFGTSKSLSRHLSTHIKTMKNGTGGALKCPVCQLQLSCASSLKRHMIIHTGLKPYKCDECQLSFSQREVLKRHMDTHTKEKRHQCPHCTACFAQKTNLQQHINRMHTEGERQHKCHLCQRTFNHVSGLSRHLVTHAGVTFACKECGRQFTDRSAVQRHVQNVHKIKDNDDAEGNENDAEFI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00569214;
90% Identity: iTF_00569214;
80% Identity: -