Basic Information

Gene Symbol
ct
Assembly
GCA_035046005.1
Location
JAWNOK010000020.1:22511289-22548163[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.1e-26 7.6e-23 80.5 0.0 3 72 1199 1269 1197 1274 0.95
2 3 1.1e-31 7.5e-28 96.6 0.0 3 77 1681 1756 1679 1758 0.96
3 3 6.6e-31 4.6e-27 94.1 0.0 3 76 1962 2036 1960 2039 0.96

Sequence Information

Coding Sequence
ATGGGCACAGGGGTGCAAAGGGTGCTTGAGTTTGGGTTTGAGCGCGCTACTCTAGCCGAGAAGGAAGTGAATACACTCAAGGAGCAACTATCCACAAGCACGCCCGGCAGCAATAGCGatagtaacagcaacagcaacagcgataacattaacattaacacagcaacagcagctggtgaaaacgcaacagcagcagcaacagtagcagcagcagcagcagcggcagcagcattAATTAACGGTGAAGAGGAAACGAGTGGAAATATTGATAGCGATAGCGACAAACTGTTGAACAGTTCGATTGTTGCAGCGGCCTTAACGCTGCAACAGAACGGCGGCAATCTGTTGGCCAATACAAATACACCGTCGCCATCGCCGCCGCTGCTTACCgccgagcagcagcaacagttgcagagCAGTCTGCAGCAGAACGGCGTAGGTGGCGCTTGTCTCAATCCAAAGCTTTTCTTTAATCACGCACAGCAAATGATGATggaagcggcagcagcagcggctgcagcggcggctgctgcagcggcagcgcaacaacagcaacaaacatcGCCAATGCATTCacccgctgcagcagcaacaacggcagcaacagcagcaactgaaacaacgacaacaacaacagcaacagcagcaacatcaaacacagcagcaacagcagcagttggtGACATTACAGCCGCCAGCAATTGCAATGACGATGACGAGGACGATGATGAGGAAGATGCATCGATGCAATCAAATGTCGCCCATGCCGATGGTGAGctcgatgatgatgatgatatggAGCTAGATGCGGAACATGTGGCTACCGCAGCCGTTGCTGAGTCATCGGCAAGAACTGATAAAATTGCCGAATCGTTGGCAACGCAACATAATGATGTTGCCAACGATAATGATGAAGAtaacgacgatgatgatgctgttgaagagcaggaggaggagcacGATGAGGATGCCGATGCTGATGCCGATAATGATGAAGatggcgatgatgatgatgaggaagCTAGTTTAAATGTTAGCAGTAatcataacaacaacaataccgATAGCTGTAGTcgaaagaacaacaataacaacaacaacaacaacaacaacagtgagaCGCAACATGTTGCACTGCgtgataataataatgtaaatgAGCAACATGTGGCACATAGCGCTGAGGACGAAGATTgcaccaacaataacaataacaacaacaacagcaacagtaacaacaacaacaacagtggcaagCGCAAAAAGCgcaacgccagcaacaacaacaataacaacaacaacaatcagccCGCTGTTCTATTAGCTGCCAAAGACAAAGAGGTAAGCAAGTCATTCGCACACACATCGCTGACTAGCATTAAAGCACTTTTGGATGAGCTGCAACGCCTGCGTGCTCTGGAGCAAACTCACCTGGTACAAATCCAGAGGCTCGAGGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGATTGGAGGCGCGTTTGGATAAGCAACAGATAAACGAGGCATTGGCCGAGGCAACTGCATTGGCGGCTGCTGTTAATGCGGCAGCaacaattaacaataacaacaataataacaacaacaatagtaccagcaatattaacaacaataacagcagcaataacaacaatcacaGCAGCCAgagcaatgacaacaacaatgaaatatccacaacaacaacaacaagtgcgaCAGCGACAATTTtcaaatcagcagcagcagcagcagcaacaacaacaacagatcTTACATCAACTCATCAGGACGATGAtgccgatgatgatgataatgatcgCGATAATGAGCTAGccgatgctgatgatgatgacgatatGGAAATCACAGGCAgcgagcagcaacaacaacaacagcagcagcaacaacatacaATTGCCAACAATCGGCATGAGGAGGATCAGGATGATGAGGAGGGCGATGATCGGGATGCCGATATGTCGAATGCTACAGTCAACGCGGAGAGCAATGAGCTGAAAATCAAAAAGGAGCAACACAGTCCACTGGATCTGAATGTGCTCAGTCCACAGTCGGCACTggccgctgccgccgccgcagcagcagccgctgcctGCGCCAACGACCCAAACAAATTCCAAGCGCTACTTTTGGAACGCACCAAAGCTTTTGCAGCCGAGGCACTCAAAAATGGTGCCAGCGATGCCTCAAATCCAAATAGCGATGAAGAGGCACGTGCAACAGAGCCGTcgaccacagcaacaacagctgatcATGTGGCAGCCACAGCTGATCAAGATGCCAGCGTTGACATAGCCGTGAAGTCAAAGCCAGAAACAAGCCAGATTTCAGACGAAACGAATGAAATTGTAAAACTGCCGACAGTGGCAAATTTGCAGCCAAAAGTTGAAATCGTTGATGCCGACGATGCAGATGAGGGCAACCCTGTTGCAGGGCTTGAGGGGGCGTGTCAAACGCTGGAAGAGCAGCTGGTGAATAGCTATTGGAGGCGTGGCTTTGAAACAAATACAGCAGCATCAgtagtagcaacagcagcagcagcagcaggtccaacagcagcaactgcagccgCTGGGAGCAAAACGCCAACAATTTATCAAAATGCCAATAcggtgcagcagcagcagcaattgttgccgccaccgccgccgccgccgccacagcagcagcaacaacaacaacaacagcactttgccacgcaacaacaacaacaacaacactatcagcaacaacagcaacagcaacatggaCCCTCGTCCACAGTGTTGCTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTtgttccaattccaaatcgtcGCGATTAGATGCCGGGCCACATCACCATACGCAGCACCAGCATacacatcaacagcagcagcaacagacacaacagcagcagcagcaattgttgcaacagcaacatcaccatcacaacagcagcaatagcagcaacagcagcagcagcgccactGCCAGCGATCCCCtaaatcatcatcatcatgccCATCATCATGGCCATGGGCATGGTCAactgttgcatgccacacatcATCTGCAGCATCACGGTGGCGGTGATTCAAATTCATCCAGCGCCAATAGTACACCAAACAGCACTGCACAATTGGCAGCAAGTATTGCCAGTACACTCAATGGCAACAAGTCGCTGTTacaggcagcagctgctgccaatgtagcagctgctgctgctgtcgttgccgTTGGTGAGGATAATAACAACAGTCTGACACCGAATGCAAATGCCGCTGctgcggcagcagcaatggcTGCCCATGCCCAGCATGCGGCCGCATTGGGTGCACCAAATTTTTTACCCAATTTACCGAATTTACCCAGTTTACCGGCATTCCAATTTGCTGCCGCCGCAGCCGCTGGCCAAGAGGCACGTGCACATTTCCGTTTCGCCGATGCggaattgcaattgcaaccGGGTGTGTCGATGGCCGGTCGTTTGGGTGAATCTCTGATACCCAAAGGTGATCCCATGGAGGCCAAATTACAGGAGATGCTGCGTTATAATATGGATAAATATGCGAATCAAGCGCTGGATACGTTGCATATATCGCGACGTGTACGGGAGCTGCTATCGGTGCATAATATCGGGCAACGTCTGTTTGCCAAATACATTTTGGGACTGTCGCAGGGCACCGTGTCGGAGCTGTTGAGCAAACCGAAGCCATGGGATAAGCTGACCGAGAAGGGTCGTGACAGTTACCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCCGTTATGCTGCTCAAATCGCTTATACCCAAAAAAGATTCTGGACTGCCACAGTATGCTGGTCGCGGCCCTGGAGGCGAAGATTCCATGTCTGAGGATCGCATTGCCCACATACTCAGCGAGGCATCGTCGCTGATGAAGAGCAACGCAGTCGCAgcccaacaacagcatcagcaacaggaGCATCAGCGTCGTCATATTGCCGCCGATGATACGCACAGCAACGAGGATAGCAAATCACCACATCAAAGTTGTACTTCACCATTCTACAAAGTCGATCAGCAGctgaagcaacagcagcagcagcagcaacaacagcagcagcaacaacaacagcagcagcaattgcatGTCTCGGAGCATGCGCAACGTGAGCAACGGGAAGCGGTCGCTGCAGCCgtacatcagcagcagcgagaGCAGCgcgaacagcagcagcagcgattACGTCACGAGGATTTGGCACAGGACAAAATGGCGCGTCTGTATCAGGAGCTGATGGCGCGTACACCGCGTGAAGCGGCCTTCCCTGGCTTTTTGCTATCGCCGTTCTTTGGTGGTGCCGCCGGCATGCCCGGAGCAGCTGCCAATCCATTCCCTGCGGCCATGGCCGCCGATGAGAACATGCGTCACGCGTTCGAGCGCGAAATCGccaaactgcagcagcaacatcagcagcaagcgcAGGCCGCCAGTTTTCCCAACTTTTCCAGTTTGATggcactgcagcagcaggtgCTAAACGGTGCACAGGATCTGTCGCTGGCCGGCAAGGATATCAAGTTGAATGGTCAGCGCTCATCGCTGGATCAGCACAGCGTGAGCGGTAGCGGTAGCAGCAAGGACGGCGAGCGTGGCGGTAACGATGATTTCGTAGCACTACCTGGTCATGCACGCAAATCCGATGGCGGCAATACGCCCGCACCACCGGCACCACCCGCACCGCCAGCACCGCCAAACAGCAGTAATCCCAACGGATCGGCTAATGTAAGCATTGGTGGTGGCAATCATGGCAGCAATTCGGCAGCGCCAAGTCCATTGAGCAACTCAATATTGCCACCGGCATTGAGTAGTCAGGGTGAGGAATTTGCGGCAACGGCGAGTCCATTGCAACGCATGGCATCCATAACGAATTCACTGATCACCCAACCACCGGTGACGCCGCATCATTCGCAGCCACAGCGACCAACGAAAGCGGTGCTGCCACCGATAACACAGCAACAATTCGATATGTTCAACAATCTGAACACGGAGGACATTGTGCGACGCGTCAAGGAGGCACTCTCACAGTACAGCATCTCGCAGCGACTGTTCGGTGAATCCGTGTTGGGTTTATCCCAGGGCTCCGTCTCCGATCTGTTGGCACGTCCCAAGCCCTGGCATATGCTAACCCAAAAGGGTCGCGAACCCTTCATACGCATGAAAATGTTCCTCGAGGATGAGAATGCAGTACACAAACTGGTCGCCAGTCAGTATAAAATCGCACCCGAGAAACTAATGCGTACCGGCAGCTACAGCGGCAGTCCACAGATGCCCCAGGgcttggccaacaaaatgcAAGCCACACTACCCATGCAAAAGATGATGAACGAACTGAAGCTGCAGGAACCAGCGCAGGCCCAGCATATTATGCAACAAATGCAGGCTGCTGCAGCCATGTCAGCGGccatgcagcagcaacagcaacaggcagcGGCTGCACAAGCCGCAGCCGTACAACAGGCACAACAGAGTCAGgtggcacaacagcaacagcagcagcagcatcaacaggtgcagcagcatcaacagcagcagcagcaacaggcagcACAGCTACTACACCATCAGAATATGCTGCTGACGTCACCGGGCTTACCGCCACAGCATGCGATTAGTTTGCCCGGTGCCGCTGTCGGTGCGGCCAGTACGCCCAGTGGCCAGACAAGTGGCAACCCCGTGGTGGGTGTGGCCACACCAGTGAGTGGCGAAAAGAAGCCCATGATGATGCCCGTACATGTGGGCGCACACGCTCCCAATGCCATGCGTAGTCTGCATCAGCATATGTCTCCAACCGTCTATGAAATGGCTGCATTAACTCAAGATCTGGATACGCATGATATAACCACCAAAATTAAGGAAGCTCTTTTGGCTAACAACATTGGCCAGAAGATCTTTGGCGAGGCTGTGCTTGGACTATCACAGGGCTCCGTATCGGAGCTGTTGAGCAAACCGAAGCCCTGGCACATGCTGTCGATCAAGGGACGCGAACCCTTCATACGCATGCAACTCTGGCTAAGTGATGCCAACAACGTTGAGCGGTTGCAGCTGCTGAAGAATGAGCGACGTGAGGCGAGCAAACGACGTCGCAGCACTGGACCCAATCAGCAGGACAATAGCAGCGATACGTCTAGTAATGATACCAATGATTTCTATACCAGCAGTCCGGGTCCGGGTTCGGTGGGTTCATCGGTTAGCGGTGCACCGCCGAGCAAGAAGCAGCGTGTACTCTTCTCCGAGGAACAAAAGGAGGCACTACGTCTGGCCTTTGCCCTTGATCCGTATCCAAATGTTGGCACCATTGAGTTCTTGGCCAATGAGCTCAGTTTGGCCACACGTACGATTACCAATTGGTTCCACAATCATCGCATGCGCTTGAAGCAACAGGTACCGCACGGTCAACCCGGTCAGGATAATCCCATACCGAGTCGCGAGAATACCAATGCCACACCCTTTGATCCCGTCCAGTTTCGCATACTGCTGCAGCAGCGTCTGGTGGAGCTGCACAAGGAGCGCATTGGTTTGAGTGGTGCGCCCATACCATACCCACCGTACTTTGCCGCAGCTGCACTGCTCGGTCGCAGTCTTGCGGGTATACCCGGTGCTGCTGCCgcagcaaatgcagcagctgctgcagctgccgctgttgGTGCCGCTGGCGGTGATGAGCTGCAGGCTCTCAATCAGGCCTTCAAGGAACAGATGAGCGGTCTAGATCTGTCGATGCCAACGCTTAAACGTGAACGCAGCGATGATTATCAGGATGATTTGGAGCTCGATGCCAGCGGACACAATCTAAGCGACAATGAGTCCATCGAGGGTGGCCACGATGGGGACAACAATACCAGCGCTGCCAATGCCAGCAATGCTGCCGTCGCTGCCGTCTCCGAGTACGAGCAGGCGCTGCAGAAATCAGCgcttgctgctgccgctgcctacATGAGCAATGCAGCGCGTAGTTCGCGCCGCAAGCCGGCTGCACCACAGTGGGTTAATCCCGCTGCAGCTGGCACAACACCCACTGTCTCTGCTGCGGCTGTTGTCGCAGCTGCAGCggccgcagcggcagcagctgcagcagccgctgctgctggtggcgcCGAGAGCAACGAGCGTATCATTAACGGCGTGTGCGTTATGCAGCCGTCCGAGTACAGTCGCGATGAGAGCGATAGCATTAAAGGTGCCAACGATGGGGATAATGATGAGCATGCTCAGCTCGAAATTGATCAGCGTTTCATGGAGCCCGAAGTGCGTATTAAGCAGGAggaagacgacgacgaagacgaacagcagcagcagcagcagtcggaggcgtcacagcagcagcagcagcagttggtgGAGCAGCCGTGTGAGCAGCTCGACAGCGCTGCCAGTGAGCAGCAGTTAAAGGTGATCAATGAGGATAAATTGCGCTTGGTGCGTGTGCGACGTCTCAGCAGCAATGGTGAGAGCGAAGAGCATATCGTTGCTGCGCAGCAGGCAGCGTctgcgacagcgacgccagcagcagcagcggcagcagcgtgGAACTACTAA
Protein Sequence
MGTGVQRVLEFGFERATLAEKEVNTLKEQLSTSTPGSNSDSNSNSNSDNININTATAAGENATAAATVAAAAAAAAALINGEEETSGNIDSDSDKLLNSSIVAAALTLQQNGGNLLANTNTPSPSPPLLTAEQQQQLQSSLQQNGVGGACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAAQQQQQTSPMHSPAAAATTAATAATETTTTTTATAATSNTAATAAVGDITAASNCNDDDEDDDEEDASMQSNVAHADGELDDDDDMELDAEHVATAAVAESSARTDKIAESLATQHNDVANDNDEDNDDDDAVEEQEEEHDEDADADADNDEDGDDDDEEASLNVSSNHNNNNTDSCSRKNNNNNNNNNNNSETQHVALRDNNNVNEQHVAHSAEDEDCTNNNNNNNNSNSNNNNNSGKRKKRNASNNNNNNNNNQPAVLLAAKDKEVSKSFAHTSLTSIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATINNNNNNNNNNSTSNINNNNSSNNNNHSSQSNDNNNEISTTTTTSATATIFKSAAAAAATTTTDLTSTHQDDDADDDDNDRDNELADADDDDDMEITGSEQQQQQQQQQQHTIANNRHEEDQDDEEGDDRDADMSNATVNAESNELKIKKEQHSPLDLNVLSPQSALAAAAAAAAAAACANDPNKFQALLLERTKAFAAEALKNGASDASNPNSDEEARATEPSTTATTADHVAATADQDASVDIAVKSKPETSQISDETNEIVKLPTVANLQPKVEIVDADDADEGNPVAGLEGACQTLEEQLVNSYWRRGFETNTAASVVATAAAAAGPTAATAAAGSKTPTIYQNANTVQQQQQLLPPPPPPPPQQQQQQQQQHFATQQQQQQHYQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSSRLDAGPHHHTQHQHTHQQQQQQTQQQQQQLLQQQHHHHNSSNSSNSSSSATASDPLNHHHHAHHHGHGHGQLLHATHHLQHHGGGDSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAAAAVVAVGEDNNNSLTPNANAAAAAAAMAAHAQHAAALGAPNFLPNLPNLPSLPAFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGPGGEDSMSEDRIAHILSEASSLMKSNAVAAQQQHQQQEHQRRHIAADDTHSNEDSKSPHQSCTSPFYKVDQQLKQQQQQQQQQQQQQQQQQQLHVSEHAQREQREAVAAAVHQQQREQREQQQQRLRHEDLAQDKMARLYQELMARTPREAAFPGFLLSPFFGGAAGMPGAAANPFPAAMAADENMRHAFEREIAKLQQQHQQQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSLDQHSVSGSGSSKDGERGGNDDFVALPGHARKSDGGNTPAPPAPPAPPAPPNSSNPNGSANVSIGGGNHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQQQAAAAQAAAVQQAQQSQVAQQQQQQQHQQVQQHQQQQQQQAAQLLHHQNMLLTSPGLPPQHAISLPGAAVGAASTPSGQTSGNPVVGVATPVSGEKKPMMMPVHVGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERIGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAANAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDDLELDASGHNLSDNESIEGGHDGDNNTSAANASNAAVAAVSEYEQALQKSALAAAAAYMSNAARSSRRKPAAPQWVNPAAAGTTPTVSAAAVVAAAAAAAAAAAAAAAAGGAESNERIINGVCVMQPSEYSRDESDSIKGANDGDNDEHAQLEIDQRFMEPEVRIKQEEDDDEDEQQQQQQSEASQQQQQQLVEQPCEQLDSAASEQQLKVINEDKLRLVRVRRLSSNGESEEHIVAAQQAASATATPAAAAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00470767;
90% Identity
iTF_00470767;
80% Identity
iTF_00470767;