Basic Information

Gene Symbol
-
Assembly
GCA_035046005.1
Location
JAWNOK010000003.1:8044042-8045025[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-11 6.9e-08 33.0 0.0 13 89 140 206 133 206 0.81
2 2 9.6 2e+04 -3.7 0.1 6 15 261 270 253 277 0.56

Sequence Information

Coding Sequence
atgagcaATACTCGAGAGCATCTTCAATGCAGTAGAAGAGGATGTACTTACACTACCAATAGATCTTACAACTTGGAGCGCCACGAACGCAACCATGAAAAAGGCAAAGTGCCAGTGTCCCAGTGTCAACCGTGTCCGCATTGCACATATGCAGCCGGATCAGTTCACAATTTAATGCGCCATATTGGCAAAAAGCATGCAGGTTTAAGTATACAGGAGCAAAAGGGTCAGGGCCCTAGCAGACAACCAGAGAAGCGGAAGGAAGTGCCACCGACTAAGGAGCCAATAATTCAAGTTGTTAAAAAACCCGAAGAAGTAGAGAAATCCCCAGAACAAACGCAGGCATTTAAAGATGAACCAATTCAAAACTCTTCACTTTGGCATTGGAGCTcaccacagcaacaagagcGGAATTTCCTGAGACGTAGTGAGCTTAGCGCAGAATTTAAAATACTCGATCGCACCATCAACATGTTCAAGTTGTATACGTTGGTGAAAGCCAGGGGTGGAGTCATTACTGTGCGCAAATGGGATGACGTTGCTGCAGCCCTGGGTCTCCCAACAGGGTCAGGTCGTCATGTGCATGCAAAATACATGGATTTACTGAATAAATTTGAGCAAAATGAGGAAGAACGTTTACAGGAATGTGAGAAAGTGGAAGGGTTGCCTACTTGGTGGGATGACGGTGATTATATCGCTGATACGGAGACTTACATCCCCGACGACAAACAGTTCGAAAGCCCATCCATTAATATTCAGAATGCCCTTGTTAAACTAATATACAATAAGTATTATTCGAATCACGAAAAGAATGCCAAGCCGTTCCAACGGTTTCGCGTGAAGGATTCGTGGATTTGTGCCACAATGTTAAAATATCAAGCTTTAATTTGTCAACTGCATTTCAAACATTATACAGATCCTTGA
Protein Sequence
MSNTREHLQCSRRGCTYTTNRSYNLERHERNHEKGKVPVSQCQPCPHCTYAAGSVHNLMRHIGKKHAGLSIQEQKGQGPSRQPEKRKEVPPTKEPIIQVVKKPEEVEKSPEQTQAFKDEPIQNSSLWHWSSPQQQERNFLRRSELSAEFKILDRTINMFKLYTLVKARGGVITVRKWDDVAAALGLPTGSGRHVHAKYMDLLNKFEQNEEERLQECEKVEGLPTWWDDGDYIADTETYIPDDKQFESPSINIQNALVKLIYNKYYSNHEKNAKPFQRFRVKDSWICATMLKYQALICQLHFKHYTDP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00478501;
90% Identity
iTF_00478501;
80% Identity
-