Basic Information

Gene Symbol
pnr
Assembly
GCA_963989225.1
Location
OZ022331.1:14285980-14300826[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-18 3.2e-14 54.1 3.2 1 34 128 160 128 162 0.97
2 2 2e-19 2.3e-15 57.8 5.8 1 35 182 215 182 216 0.98

Sequence Information

Coding Sequence
ATGTTCCACTCATCGCCAGCAACTTCCTACCCGGAATCAAGCTACCAACATCTTCCCCAGCAAGCCCCTGTTTACGTCCCTTCGTCTCGGGCTGTTCCTGGACAATATCCAGGTGGTGGAGGGGGTGGAAGTCATTTTGGAGCTGCGCCCCCTCAAGCAGCTGCCACGTGGCATGCTGACCCCGCAGGGTATGTTGGCGGAGGGACTCATGGGTTAGCAACGGTTGCTGGAAACCCTCATCATAGTGCACTAAGTGCTGGGCAGTTCTACGCCCAGAATATGATGATGGGAGGGTGGAGGGCAGCGTATGACGGAAGCGGGTTCCAAAGGACTTCGCCCTACGAAAGTGCAATGGATTTTCAGTTCGGAGAAGGTCGTGAATGTGTGAACTGCGGTGCAATTTCAACCCCCCTGTGGCGCAGAGACGGCACGGGACATTATTTGTGCAATGCATGCGGATTATACCACAAAATGAATGGGATGAATAGGCCCCTTATCAAACCGTCTAAAAGACTGACTGCAACAAGACGCCTGGGCCTATGTTGCACCAACTGTGGCACGCGCACCACGACGCTTTGGCGACGAAACAACGACGGTGAACCCGTCTGCAATGCTTGCGGCCTCTACTTCAAGCTCCACGGTGTAAACCGTCCTTTAGCAATGCGCAAAGACGGAATCCAAACAAGAAAACGAAAACCGAAGAAACCTTCTGGCAGCAACAGCAGCGGTGGCGAACGAGATGAACATAGTACGGCCCCAAGTGAAGATGCCAAATCTACATCAGTCCATCACAGCCAATCAAACCAAGGCCACCAACACACGCCATCCTCCAGTGTAGACAACACTTCAAAATCATCATCAGAAAGACCCTATTTAGGGCAAACATCCCTCCTACCTTCCACACCATCATCATCAACCTCATCTTCAGGGATTAAAAGTGAACCTGGGTACGAATCTATGGCATCTTCTCAATATAACTGCCTCCAGGCCCACCAAGGGTACAGCGCGTATCATCAACAGATGTTTGGGTTCTCTGCAGGGCCCCCCAGTGGAGCTGAAGTCGCGTATCATCATCAGCATCATGTCACAGCTGCGGCTAAGCTAATGGCATCTTCGTAG
Protein Sequence
MFHSSPATSYPESSYQHLPQQAPVYVPSSRAVPGQYPGGGGGGSHFGAAPPQAAATWHADPAGYVGGGTHGLATVAGNPHHSALSAGQFYAQNMMMGGWRAAYDGSGFQRTSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPSGSNSSGGERDEHSTAPSEDAKSTSVHHSQSNQGHQHTPSSSVDNTSKSSSERPYLGQTSLLPSTPSSSTSSSGIKSEPGYESMASSQYNCLQAHQGYSAYHQQMFGFSAGPPSGAEVAYHHQHHVTAAAKLMASS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01105245;
90% Identity
-
80% Identity
-