Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: hint-1
Assembly: GCA_963989225.1
Location: OZ022325.1:61840775-61847390[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0027 0.5 12.8 5.0 2 23 194 215 193 215 0.97

2 8 0.0041 0.74 12.3 0.9 2 23 219 239 218 239 0.95

3 8 0.0059 1.1 11.8 2.7 3 23 247 267 245 267 0.92

4 8 7.8e-05 0.014 17.7 3.8 1 23 273 295 273 295 0.97

5 8 0.0051 0.93 12.0 5.6 1 21 301 321 301 323 0.95

6 8 0.00042 0.077 15.4 1.8 1 23 329 352 329 352 0.97

7 8 0.00065 0.12 14.8 3.1 1 23 358 380 358 380 0.98

8 8 0.065 12 8.5 1.8 2 23 387 409 386 409 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0027	0.5	12.8	5.0	2	23	194	215	193	215	0.97
2	8	0.0041	0.74	12.3	0.9	2	23	219	239	218	239	0.95
3	8	0.0059	1.1	11.8	2.7	3	23	247	267	245	267	0.92
4	8	7.8e-05	0.014	17.7	3.8	1	23	273	295	273	295	0.97
5	8	0.0051	0.93	12.0	5.6	1	21	301	321	301	323	0.95
6	8	0.00042	0.077	15.4	1.8	1	23	329	352	329	352	0.97
7	8	0.00065	0.12	14.8	3.1	1	23	358	380	358	380	0.98
8	8	0.065	12	8.5	1.8	2	23	387	409	386	409	0.95

Sequence Information

Coding Sequence: ATGGATGCAAGTACAGCTAAGATTGAAGAAgtttttataaaagaagaacCAAATAAAGAATTGACATTAAATGACGAATTAAAATTACTTCTGCGTGAGGTAAAAGAAGAAAACTCAGATGACAAATGCAACAAAACTGAAAACATACAAGTATCACTTTCAACTGGAAACGACAATATTAGAAAACAAGATGAAGAACAAAAGAATCATGAAACATATCTCGCTGAAGTAGAACTGAAAAGCCATAATGTTAAAATAATAAGTAATTGCCAGGATTTAGAACAAGatcattttgaagaaacaattgatgaagagaaaaaaattttaccAACATTGCGACCATTTGACGAAACGTTAAAAATATTGCCGGAGAATTACGTCAACAATGCAACTGAAGGAGTGGAAGAATTTGGattagaaaattcaatttgcaaAGAATTTACAGTGAAGAAAGAATATGAAAGTGTTTCTGACGGTAATAAATCTCCAGAATATTCGTTTTTAGATTATgacgaaaaaataattgatggtcAAAGCAAATTAGAAAATAGTGACACTAGCTCGCCTCTCCAAGCTAATCAGTGCCCCAAATGCCGCTACATCTTTAAAACGGAAGCATACTTTAAAAGACATAAATGTAAACATTCAAAAACTGTTTGCAATATTTGCCAAAAGACATTCACTGAACTTAATATGAAAGCACATAAAAAAATTCACGATAACATTCGGACCTATTTATGCATTGAATGCGACAAATCTTTTTTGCGCTGCAATGATCTAACAAAACATTTGAAGACCCATACAGGAGACAAAAGATTCGCGTGTCATTTTTGTGAGAGAAAATTCGCTGAAAAAGGTCATCTTAGGGATCATATTCGGAGTCACACCGGCGAAAAACCTTATCATTGTAAAATTTGTGATTACAAAAGCTCGCTTTCAAGTTCATTGAAGCGTCATATCCGGTGTCATACTGGAGAGAAATTGTATAGTTGTAATTTATGCGATGGTAAACgattttccaataataattgtttgcaAATACATATTAGAGGGCATACCGGTGAAAAACCGTATGAATGTGATATGTGTCAGTATAAATGTACTAACTTAAGTGGTTTAAGGTcgcataaaaaaattcattctgatgaAAAATCGttaaaatgtgaattttgtgaATATAGAAGTAGATTTCGGAGTGATATCAAACGACATACTCTGAAAATACATCCATTAGAAGCTGAAGGTATGATGGTTCGGAAGTTTTGTACGGAAGTAGAGAAGGCTAAAAAAGCATCTTCCCAAAGTGAATCAacgatttttgacaaaattatttccaaagaAATTCCTGCGGATGTGATTTTCGAGGATGAAAAATGTCTTGCTTTTAATGATGTTATGCCGCAAGCACCAGTTCATTTTTTGGTGATACcgaaaaagaaaataacaatGTTGGATACCTGTGAAGATTACGACCAGACCATTTTGGGCCATTTATTACTAACTGCAAGATGTTTAGCAAAAGAACGTTTGCCAAATGGTTATAGGGTCGTCATAAATAATGGTGAACAAGGATGTCAATCAGTTTATCATCTACATATCCATGTTTTGGGTGGCCGGCAATTGGGGTGGCCACCAGGCTAA
Protein Sequence: MDASTAKIEEVFIKEEPNKELTLNDELKLLLREVKEENSDDKCNKTENIQVSLSTGNDNIRKQDEEQKNHETYLAEVELKSHNVKIISNCQDLEQDHFEETIDEEKKILPTLRPFDETLKILPENYVNNATEGVEEFGLENSICKEFTVKKEYESVSDGNKSPEYSFLDYDEKIIDGQSKLENSDTSSPLQANQCPKCRYIFKTEAYFKRHKCKHSKTVCNICQKTFTELNMKAHKKIHDNIRTYLCIECDKSFLRCNDLTKHLKTHTGDKRFACHFCERKFAEKGHLRDHIRSHTGEKPYHCKICDYKSSLSSSLKRHIRCHTGEKLYSCNLCDGKRFSNNNCLQIHIRGHTGEKPYECDMCQYKCTNLSGLRSHKKIHSDEKSLKCEFCEYRSRFRSDIKRHTLKIHPLEAEGMMVRKFCTEVEKAKKASSQSESTIFDKIISKEIPADVIFEDEKCLAFNDVMPQAPVHFLVIPKKKITMLDTCEDYDQTILGHLLLTARCLAKERLPNGYRVVINNGEQGCQSVYHLHIHVLGGRQLGWPPG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -