Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022327.1:60350807-60360779[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.16 29 7.3 3.6 2 23 199 221 198 221 0.95

2 19 0.014 2.5 10.6 0.8 2 21 295 314 294 315 0.93

3 19 2.1 3.8e+02 3.7 4.1 1 21 322 342 322 343 0.94

4 19 0.18 32 7.1 0.5 1 23 364 386 364 386 0.92

5 19 3.9 7.1e+02 2.9 0.3 3 20 397 414 396 416 0.90

6 19 0.87 1.6e+02 4.9 3.0 2 23 423 443 422 443 0.87

7 19 0.021 3.8 10.0 1.6 1 23 476 498 476 498 0.98

8 19 0.0029 0.52 12.7 0.4 2 23 504 525 504 525 0.97

9 19 0.0001 0.019 17.3 0.8 6 23 590 607 587 607 0.96

10 19 0.022 4.1 10.0 1.0 1 21 623 643 623 644 0.95

11 19 0.13 24 7.5 5.1 1 23 670 692 670 692 0.91

12 19 0.00029 0.054 15.9 1.8 1 23 700 722 700 722 0.97

13 19 0.00095 0.17 14.3 0.7 3 23 734 754 733 754 0.97

14 19 0.24 43 6.7 1.0 3 23 757 778 755 778 0.90

15 19 0.013 2.4 10.6 1.4 3 23 788 808 786 808 0.97

16 19 0.016 2.9 10.4 4.0 1 23 814 835 814 835 0.97

17 19 0.008 1.5 11.3 0.1 1 21 844 864 844 865 0.96

18 19 0.2 36 7.0 0.2 6 23 873 890 873 890 0.95

19 19 0.00016 0.028 16.7 0.8 1 23 946 969 946 969 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.16	29	7.3	3.6	2	23	199	221	198	221	0.95
2	19	0.014	2.5	10.6	0.8	2	21	295	314	294	315	0.93
3	19	2.1	3.8e+02	3.7	4.1	1	21	322	342	322	343	0.94
4	19	0.18	32	7.1	0.5	1	23	364	386	364	386	0.92
5	19	3.9	7.1e+02	2.9	0.3	3	20	397	414	396	416	0.90
6	19	0.87	1.6e+02	4.9	3.0	2	23	423	443	422	443	0.87
7	19	0.021	3.8	10.0	1.6	1	23	476	498	476	498	0.98
8	19	0.0029	0.52	12.7	0.4	2	23	504	525	504	525	0.97
9	19	0.0001	0.019	17.3	0.8	6	23	590	607	587	607	0.96
10	19	0.022	4.1	10.0	1.0	1	21	623	643	623	644	0.95
11	19	0.13	24	7.5	5.1	1	23	670	692	670	692	0.91
12	19	0.00029	0.054	15.9	1.8	1	23	700	722	700	722	0.97
13	19	0.00095	0.17	14.3	0.7	3	23	734	754	733	754	0.97
14	19	0.24	43	6.7	1.0	3	23	757	778	755	778	0.90
15	19	0.013	2.4	10.6	1.4	3	23	788	808	786	808	0.97
16	19	0.016	2.9	10.4	4.0	1	23	814	835	814	835	0.97
17	19	0.008	1.5	11.3	0.1	1	21	844	864	844	865	0.96
18	19	0.2	36	7.0	0.2	6	23	873	890	873	890	0.95
19	19	0.00016	0.028	16.7	0.8	1	23	946	969	946	969	0.96

Sequence Information

Coding Sequence: ATGAGTAGACAAGATGTACGAAATAGTACTTTTAACATAATGTGTCGCTTGTGCTTGGCGTCCGACGATAAGTTATTAtctatttttgatgaaaattacaCGTTTTTACCACAGAGGATTGCAGCTTGTGTAAATGTTGAAATTTATAGAGATGACAGCTTACCAAAAACTATTTGTGAACATTGCTTAAAGAAAGTCGAAAATTggtttgatttcaaaaaatgttgcgaTGATTCCCAATCCAAATTGCGGCAATGGGCCAGCATTAATAGTATTATATGCAACAAGTCCGTATGCGCGacTGAAGTTAAACAAGAGGAGAATACTTTTTTCGTAGATAGCGAAGTTGAAATCGTGGAAAATGATttgataataataaaagaagaagctGTGGATCCCATAGCAACTGACGATTGTTTTCCTCAGCCTGAGCAAGAAGAAATTCCTTCATCACTTAGCGAACTTCAAGTTTCAACCCATGAATCAACTGATTCGTTACTTGTGCCTACTTTTGAGTGCCCCGCATCAGTTCACGGACTGAACGCGCCTATTGAAAACAGAGGTACAACTATAAAAATATCcgatttaacaaaaaaatgtagAGAATGCTCTAAAGAATTTAGCACCGTTCATAGTCGCTTACGTCACGAAAAAAGTGTTCATTATAGTATCAAgtttaacaatgaaaaaaagAGCTTTGAAAATGCTACTATAGACAATATAGTCAGTTTGAAAGACACTACTGAATCGAATGAAGTTACTATTGAACAATTCGCAGCTAGCCTACAATTGGTACTGAATAATGTGCCTGTTCATAAACCTAAAACTgagaaacattttattgaatttaataatgtaatacTTAACAtgatgaatgaattaaaatgttACATCTGCAAAACAGACTTTCAGACGGCTAAAAACCTACATTCTCATATTATAAAGATATTTCCAGTCGATAAGTTTTCTTGCTTTACTTGTTGCATTGCGTTTCCAAATTCTCATCAGTATAAGAAGCATCAAAGCATGAATTTTTGCAAAGAACGTTCTATTTTGattcaagataaaaatataaaagcttATCAGCATTATCAATGCACAATTTGTGGTGAATTATACGTACATGACAAGCTTGTGAGCAGCCATTTGACTGAGCATTTATTGCCTGGACCAACTCATCCACGGTCTTGCGAAAGATGCAAAAAACCTTTAGAAAACATGGATGAATACAAAGAACATTTCCAAAGCTCTTGTTTCTATAAAATATACTGCAGTATGTGTAAAGAAAGTTTTACAAATGAAGAATTTGAACAGCATTGCAACAAACATGACGATGATGGTTCAGAATTTTGTCTCGAGGATTATCTTATTACAGAAAATGATTGCAGAAGTGTGCCCGCAAAAGATAGCGAAGTGCTCAATAATTATTCCTGCAGTACATGCGGGGATCAGTTTTCTACTTTAGATTTATGGTGTGAGCATCAAAAACTTCACGACGACAGCATTAATCGCTGTACCGAATGTAATCGAGTTTTTGGTACTGAACTTGAACTAGAAGAGCACAAAAGCactcataataataatattaaattaaaattattccgTTGTTCTTCCACAAATTCTTACAAAGCAGTATCTGATTTTTCTTCCTCGAATTCTAACTCTCCTCATTTAGAAGAAACTACTGAAGGCACTGAAAAAGGAAATATTAATGGGCAAACTAATGAAACGGATGTTACTGAAGCTTCAAATGAGAATAAATGCTTTTGTGGAAAAGAGTTTGCATCTCCGAGCTCATTAGAAAAACATAGAAAGACGCACGCTGTCACCAAAAGAGTCGATCAAAGCTACATAAAATACAAAAGATATTCATGTCCTAAATGTAAAGGTTACTTCAGGCGCTTAGGGACGTACAGAGCACATCGAAAAAATTGTATCCGTACTAGCAACCGAGAAATTGTTGTATTAAATGTTAAAAAAGAATATGATGATTCTCAAGGAAATGGTTTCGAGTGCAATATTTGCCATCGAAGCTTTGAAACTGAAAGAGGTCTAACTTGTCATTCAAAATATCACACACAAGGCATTCCTTCAACTTATTCCTGCGATATTTGTCACAAAAGTTTTGATACAGAAAGAAAACTTGCTGTCCATTCTAAACTTCATTCACCTGACAATTATGAGGATGAAGATAATATTTGCTATATTTGTAACAAAAGTTTTGAAACCGATCGAGGCCTCCAAAATCATAACAGAATGCATGGCCACTGtcaaatttgtaacaaatatttCGATACAGACCGGGGACTGAGTTCCCATAATGCCAAAGTCCATCCATCCGCTGATGCAGATAAAATGAATTGTCAATTTTGTAAGAAGACTTTTTTGAATGTTCAGAATCTAATTGATCATTTGAAAACGCACACTGGCAAAAAATCCTTCCACtgtaatttttgtaacactgctTTTCAAAACCGATTACTGCAACAGCATCTCAAAGTGCACGCAAAACTACCTGCtagcaaaaaatataaatgtccCAATTGTTTCCAAAATTTGCCGTCTGCAAGTGCACTATCGCGTCACCTTAAAGCAAATTGTATACATTGTATACcttgtgacaaatattttactactCCAAAAGGATTAAGTAGTCATAAAGGCTCTCATAAAAAACCTAATAAAGATGGAACATATAGTTGTTTGAAATGTGATGAACATTGCGCAATCGCGCATGATATTCATCTAAAACCTAAAGTCGATAATAAATCTGTTACTATTAAACAAGAAAATACCACTGTCGTCAAACAAGAAAACCCGCCTCccaaaaatatgtatagatGTACAGAATGTAATACAACTTTTGTTAATTCTAAACGGTTGAGGCTGCATGTCTTGTCGGCTCATGTGGTTAATGACGTAAAAGATGAACTTAAGTTTTAG
Protein Sequence: MSRQDVRNSTFNIMCRLCLASDDKLLSIFDENYTFLPQRIAACVNVEIYRDDSLPKTICEHCLKKVENWFDFKKCCDDSQSKLRQWASINSIICNKSVCATEVKQEENTFFVDSEVEIVENDLIIIKEEAVDPIATDDCFPQPEQEEIPSSLSELQVSTHESTDSLLVPTFECPASVHGLNAPIENRGTTIKISDLTKKCRECSKEFSTVHSRLRHEKSVHYSIKFNNEKKSFENATIDNIVSLKDTTESNEVTIEQFAASLQLVLNNVPVHKPKTEKHFIEFNNVILNMMNELKCYICKTDFQTAKNLHSHIIKIFPVDKFSCFTCCIAFPNSHQYKKHQSMNFCKERSILIQDKNIKAYQHYQCTICGELYVHDKLVSSHLTEHLLPGPTHPRSCERCKKPLENMDEYKEHFQSSCFYKIYCSMCKESFTNEEFEQHCNKHDDDGSEFCLEDYLITENDCRSVPAKDSEVLNNYSCSTCGDQFSTLDLWCEHQKLHDDSINRCTECNRVFGTELELEEHKSTHNNNIKLKLFRCSSTNSYKAVSDFSSSNSNSPHLEETTEGTEKGNINGQTNETDVTEASNENKCFCGKEFASPSSLEKHRKTHAVTKRVDQSYIKYKRYSCPKCKGYFRRLGTYRAHRKNCIRTSNREIVVLNVKKEYDDSQGNGFECNICHRSFETERGLTCHSKYHTQGIPSTYSCDICHKSFDTERKLAVHSKLHSPDNYEDEDNICYICNKSFETDRGLQNHNRMHGHCQICNKYFDTDRGLSSHNAKVHPSADADKMNCQFCKKTFLNVQNLIDHLKTHTGKKSFHCNFCNTAFQNRLLQQHLKVHAKLPASKKYKCPNCFQNLPSASALSRHLKANCIHCIPCDKYFTTPKGLSSHKGSHKKPNKDGTYSCLKCDEHCAIAHDIHLKPKVDNKSVTIKQENTTVVKQENPPPKNMYRCTECNTTFVNSKRLRLHVLSAHVVNDVKDELKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -