Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022329.1:58501719-58505223[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.13 24 7.5 2.1 1 23 528 550 528 550 0.92

2 10 0.0012 0.22 13.9 5.8 1 23 556 578 556 578 0.96

3 10 1.5e-06 0.00027 23.1 1.5 1 20 587 606 587 608 0.94

4 10 5.4e-05 0.0099 18.2 0.5 1 23 615 638 615 638 0.97

5 10 4.2e-06 0.00076 21.7 0.4 2 23 645 666 644 666 0.96

6 10 8.8e-07 0.00016 23.8 3.5 1 23 672 694 672 694 0.99

7 10 0.0025 0.45 13.0 1.5 1 23 700 722 700 722 0.96

8 10 7.6e-05 0.014 17.7 0.4 1 23 728 750 728 750 0.97

9 10 0.24 44 6.7 1.5 3 23 759 777 758 777 0.94

10 10 0.0065 1.2 11.6 1.0 3 23 785 806 783 806 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.13	24	7.5	2.1	1	23	528	550	528	550	0.92
2	10	0.0012	0.22	13.9	5.8	1	23	556	578	556	578	0.96
3	10	1.5e-06	0.00027	23.1	1.5	1	20	587	606	587	608	0.94
4	10	5.4e-05	0.0099	18.2	0.5	1	23	615	638	615	638	0.97
5	10	4.2e-06	0.00076	21.7	0.4	2	23	645	666	644	666	0.96
6	10	8.8e-07	0.00016	23.8	3.5	1	23	672	694	672	694	0.99
7	10	0.0025	0.45	13.0	1.5	1	23	700	722	700	722	0.96
8	10	7.6e-05	0.014	17.7	0.4	1	23	728	750	728	750	0.97
9	10	0.24	44	6.7	1.5	3	23	759	777	758	777	0.94
10	10	0.0065	1.2	11.6	1.0	3	23	785	806	783	806	0.95

Sequence Information

Coding Sequence: ATGGCTGCGCAATCACGATGTGTAGTGCATGAATGTCCGTCAAAAACTTTATCCAGGGCGGAATGGGGAGCTTTATTCTGTTTTCCTGCGAATGTCATTCTTCGTGAAAAATGGTTCCGAAACTTATGTTTGGAAGGATTGTCAGATTTTACAGCCCAACAATTAAAATATAAGGGATTTCGGGTTTGCCATAGGCATTTTGAGCTGAATCAGTTTCAAAATTACCTCAAGAAGAAATTAAACTATAATTCAATTCCTCCAGCTATAATTCCAAAAGGATTGGCTGGTAAAGATGTACCTTCAACTTCAGAAGACGTACTTTTAACGTCAGAAGACGTACCTCTAACATCAGAAGACGTACCTTTAACGTCAGAAGACGTGCCTTTAACGTCAGAAGACGTACCTTTAACGTTAGAAGACGTACCTTCAACGTCAGAGTCGGCAGATGTTTTCCAAAGTGGAGCTGAGAATATCGTGAATGTTCCTTCGACATCGGACCAAGCTTGTAtagaaaatatcttgaaaactcCCAGAAAACGTAGAAAAATAGCCGATGATGATGTTTCTAAAATTGAtggtgattattttaaaaaGCAATTGATAAGATTGTTAATTATTGGCTACCCTCGTACGCAATGTGCCCAACAACCTCAACAAAATTTTCTACCTCCGTACGGTTATAATATGCCGCAACAATTAGTGTACAATCAAAATCAACCAATGTACAATATTATGTACGGTTCCCAGCCGTTATATCGTAACCAGAACACTATTAACTCATTTTCTCAACCGGTGGACTCTTGGATTCCAGAATCTTATATTGGGAACTCCGAACCGACAAATGTTCCGAAAATGAAGGAAAATAATTGTTGCGGGACAGATATGACTTGTGTTTATAAAACTATGAATAAAAGCATAATGGATTCGTGGTTTTACAACAATTATGATAACCAGAAGTATAACGAACTGCCGTCGTGCTCGAGGATTTCGGAGAATAATTTGAACCAGTGCTGTGATCTtggcgaaaaaaatattaaatctgtAAAGTATTGTAGTatccaaaaatattctgaagatATGTATTCTCAGTCAAATACTAATTATTATTTCCCGAGTAATAACGCTGATTTACATTTTGATGTTccgaaaattgatgaaaaagtgGCGGAAGATTCAAACGCAGGAGAAAGTGATATTGTTGTCGAAGACTCGGAAGAAGATACTGAAGAAAGTGATGGTGAAAAGGAAGAACGACAGTGTTTTGTTTGTCATGTTGCAATTGTTGATGGTTATGACGTAGATGCCAACACTCCTTTGTTATTGTATTCCCAAACACCCGTTTGTCaattattaaacaatattttagaaattaataatagcataaataattctttatgtAATAATTGTATTAGTTTAATTAACGCGGTGGATAATTTTCAAATGCAGTTAAATAATGTGCGAcatgaattaatttcaaaatataaatctttTAAGACTGTATTTAATTCAAATACTCAATTAGCAAgtaagaaaatcaagaaaaaacgTAAAAAATCGCGAGATGTGTGCggaattcatagttttaaatgttctgtatgcgaaaaaatattctcGCTTAAAAAGTTTTACGTATTCCACATGgcaaaacataaaataaaaactaaatacTTATGTGAACATTGCGGCTGTAGTTTTATCAAACATTCCAGCTTagtaattcatttaaaaaagcatAATAATACGTTACTAACTAAACGGTTTATTTGTCACATGTGCGGGAAAACATTTAAAAGCAAATCGAATTTGACGGaacatgaaaatttttgttcCGGAAATCCGCCGTTTACTTGCAATCTTTGCGAAAAAACATTCGCCTCATCTGCAAGATTAAAACAACACGTTCAAATTTTACACGAAAAATCTTATCCCGTTTCCTGCCCAAAATGCGACAAaggttttataaaaaaatcggATTTAAAAACGCATTTAATCAGCCACACTAACTCAAAAAAATACCAATGCACTAAATGCCAAAAAAGTTACAAGACTTTAAGCAATTTAAATCAACACTTAAAATCTCATAATCcaaaattactttttaattGCACAATTTGCTCGAAATCTTTTTTACGTAAAGAAAATTTGGATTCCCATGTAAATTTTCATAATGGACTCAAACCTTTCGCATGCAGCGTTTGTAATAAAAACTTTGCTAGCCTAAAATTCCTAAACGCGCATTTAAAAATCCATAACGGCACCGCTAAAGTTAATCCTTGTCCAATTTGTGGCAAGCACATTAGACATGGACTCGAAGACCACCTCAGAACGCACAGTAACGTCAAAGAAATTATTTGTGACGTTTGTGACATGAAATTCTTGACGAAAAGTGCGCTGAGTAAacataaaaaaagaaaacatgAAAACGAAGTTGAtgttttataa
Protein Sequence: MAAQSRCVVHECPSKTLSRAEWGALFCFPANVILREKWFRNLCLEGLSDFTAQQLKYKGFRVCHRHFELNQFQNYLKKKLNYNSIPPAIIPKGLAGKDVPSTSEDVLLTSEDVPLTSEDVPLTSEDVPLTSEDVPLTLEDVPSTSESADVFQSGAENIVNVPSTSDQACIENILKTPRKRRKIADDDVSKIDGDYFKKQLIRLLIIGYPRTQCAQQPQQNFLPPYGYNMPQQLVYNQNQPMYNIMYGSQPLYRNQNTINSFSQPVDSWIPESYIGNSEPTNVPKMKENNCCGTDMTCVYKTMNKSIMDSWFYNNYDNQKYNELPSCSRISENNLNQCCDLGEKNIKSVKYCSIQKYSEDMYSQSNTNYYFPSNNADLHFDVPKIDEKVAEDSNAGESDIVVEDSEEDTEESDGEKEERQCFVCHVAIVDGYDVDANTPLLLYSQTPVCQLLNNILEINNSINNSLCNNCISLINAVDNFQMQLNNVRHELISKYKSFKTVFNSNTQLASKKIKKKRKKSRDVCGIHSFKCSVCEKIFSLKKFYVFHMAKHKIKTKYLCEHCGCSFIKHSSLVIHLKKHNNTLLTKRFICHMCGKTFKSKSNLTEHENFCSGNPPFTCNLCEKTFASSARLKQHVQILHEKSYPVSCPKCDKGFIKKSDLKTHLISHTNSKKYQCTKCQKSYKTLSNLNQHLKSHNPKLLFNCTICSKSFLRKENLDSHVNFHNGLKPFACSVCNKNFASLKFLNAHLKIHNGTAKVNPCPICGKHIRHGLEDHLRTHSNVKEIICDVCDMKFLTKSALSKHKKRKHENEVDVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -