Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022325.1:66436807-66447130[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.046 8.3 9.0 0.1 2 23 103 124 102 124 0.96

2 12 0.11 21 7.7 1.0 1 23 203 225 203 225 0.92

3 12 8.2e-05 0.015 17.6 1.2 2 23 296 317 295 317 0.98

4 12 0.00026 0.048 16.0 0.5 1 23 323 345 323 345 0.98

5 12 0.00089 0.16 14.3 4.4 1 23 351 374 351 374 0.95

6 12 3.3e-06 0.0006 22.0 0.5 1 23 380 402 380 402 0.97

7 12 0.00021 0.038 16.3 1.8 1 23 408 430 408 430 0.97

8 12 0.0004 0.074 15.4 3.0 1 23 436 459 436 459 0.92

9 12 5.6e-06 0.001 21.3 3.0 1 23 465 487 465 487 0.97

10 12 0.0065 1.2 11.6 0.5 1 23 493 515 493 515 0.98

11 12 7.1e-05 0.013 17.8 0.6 1 23 521 543 521 543 0.99

12 12 4.9e-05 0.0089 18.3 1.3 1 23 549 571 549 571 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.046	8.3	9.0	0.1	2	23	103	124	102	124	0.96
2	12	0.11	21	7.7	1.0	1	23	203	225	203	225	0.92
3	12	8.2e-05	0.015	17.6	1.2	2	23	296	317	295	317	0.98
4	12	0.00026	0.048	16.0	0.5	1	23	323	345	323	345	0.98
5	12	0.00089	0.16	14.3	4.4	1	23	351	374	351	374	0.95
6	12	3.3e-06	0.0006	22.0	0.5	1	23	380	402	380	402	0.97
7	12	0.00021	0.038	16.3	1.8	1	23	408	430	408	430	0.97
8	12	0.0004	0.074	15.4	3.0	1	23	436	459	436	459	0.92
9	12	5.6e-06	0.001	21.3	3.0	1	23	465	487	465	487	0.97
10	12	0.0065	1.2	11.6	0.5	1	23	493	515	493	515	0.98
11	12	7.1e-05	0.013	17.8	0.6	1	23	521	543	521	543	0.99
12	12	4.9e-05	0.0089	18.3	1.3	1	23	549	571	549	571	0.98

Sequence Information

Coding Sequence: ATGACGGAAATGACTTGTTTATTGTTTGCCGAAACGAATCAAACTGAAATAAAGACCGAAAATACAGAAGAAGAGtttgataataatataaataacaacaataaatatgttaataataatatttttgatgtttatgaagaaaatgatgTAAATTATAGCAAAGATATTAATCGCGATTTAGATGAAGAAAAAGTTATATCTGAAGATGATTCTCATTGTCCACATTTAGATTATAGAAGCAGTAAAGAGGCTGGAAGCAGCAGTAAACGAATAAAATTGTCAGAACCAGccgaaaaaatcaatttaaaatgtttaatttgttttgaaccatttattgatgataatttattacgtgaacatttaattaatcatgaaaaaaatgataaacaaAAAGATATTTCGGACAAAACAGAAAATTTGGACGAACAAAATGTGCAACCCGAAATGTCAGCACAagaaaaaaatcttcaaaatgaTGAAACAGACGTTCAAAAGAAACCAATGCCTCAAAAATCGTTCCTAAAACGCTATCTCCTTCttctcaaacaaaaaaatccCCAAATGGAACAACAAACTAATACCGAAACACAAGAATCTCTTTTTAAACACAAATGTCAAGTTtgtaatactgaatttaatgaaGAATGGATGCTTTTTCTCCACAGTATTCAACACatacaaattaaattgaatgagTGGAGTGAGGAGGAAGAATCGGACGATCAAAGTGGGAAAGATACTGAAGAGTCAAAAGATGATTTAGGAAATAGAGAAGGTTTTATGCAAACGGAAAATGGGAGATATAAATGTATTGTTTGTTTTAGACCGTATCTCATGATAAATAATTTGAGGTATCATATTTTCGTCAAACATAAAgACGCTGTTCAATGCAAGGAATGCAACAAAATGTTgcgaaatcaagaaaaattaacaattcacGAGCGTAAGCACTCCTTCGAACGCCCTTTCCGCTGTGATATCTGCCACAGAGGTTTCATAGATTCAGCAGCAGCTGAACGTCACAAAAAAATACATTCCGACGATTTAGAATACAAATGCGATCAATGCGAGAAAAAATTTTCGACGAAAGATTTATTAAAATGCCACCAAACTTCTGTTCACACTAAAAATTACTGCTTTGTATGTGAAATTTGTGGAAAAGGTTTCaagaaaaagaataattttaccGAGCATTTGGATGTGCATAAAGGGAAGAAAAGTTATGAATGTGACACttgtttcaagaaatattcGTCTGCTGGCAATCTTCGCGTACATAAATTCAAACATTCAGGGGAAACGCATTTTCAATGCgaaatttgtgataaaaaatTCACGCTTCATGTTCAGCTCAAGACGCACAAATTTAACGCACATTCTGAAGAAAAACCTTTCAAATGTATCGAATGCAATAAagcattcaaaacaaaaactcAAGTTAAACGTCACATGAGGACTCACACAGGCAGCAAACCttttaaatgtaaaatttgCAGCAAAAAAATGGGCTCATTAATCGGTTTTGAACGCCATATGATGGTACATAAAGGCATTAAACCATACAAGTGCAAAAAATGCGATTACGCCACGGTTAATACCGCCAATCTCAAATTGCACGAAAGAGTTCATGATAAAGTCAAGCCTTTTAAATGCGATAAATGTGATTACAGCACTGGGAATAGGAGCAATTTGAAAGTGCACGCGAAACAACATGAAAAAAGAGACAAAGGGATgagaaaaagtaaaaaaaagtcGTCTGTTGTTGAAGAATTGATTGTTAAAAACAGTATTATTGACGAAATCCATCAAGaaacaattattgttaaaaaaattgaactgtCTGAAGAAAACGGCACTGAAAAAATTAAACTTGAagaaattttaatcaaaaaaagcGACGAAAATAATTGTTAG
Protein Sequence: MTEMTCLLFAETNQTEIKTENTEEEFDNNINNNNKYVNNNIFDVYEENDVNYSKDINRDLDEEKVISEDDSHCPHLDYRSSKEAGSSSKRIKLSEPAEKINLKCLICFEPFIDDNLLREHLINHEKNDKQKDISDKTENLDEQNVQPEMSAQEKNLQNDETDVQKKPMPQKSFLKRYLLLLKQKNPQMEQQTNTETQESLFKHKCQVCNTEFNEEWMLFLHSIQHIQIKLNEWSEEEESDDQSGKDTEESKDDLGNREGFMQTENGRYKCIVCFRPYLMINNLRYHIFVKHKDAVQCKECNKMLRNQEKLTIHERKHSFERPFRCDICHRGFIDSAAAERHKKIHSDDLEYKCDQCEKKFSTKDLLKCHQTSVHTKNYCFVCEICGKGFKKKNNFTEHLDVHKGKKSYECDTCFKKYSSAGNLRVHKFKHSGETHFQCEICDKKFTLHVQLKTHKFNAHSEEKPFKCIECNKAFKTKTQVKRHMRTHTGSKPFKCKICSKKMGSLIGFERHMMVHKGIKPYKCKKCDYATVNTANLKLHERVHDKVKPFKCDKCDYSTGNRSNLKVHAKQHEKRDKGMRKSKKKSSVVEELIVKNSIIDEIHQETIIVKKIELSEENGTEKIKLEEILIKKSDENNC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -