Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022324.1:51598371-51604013[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.062 11 8.6 0.1 1 19 240 258 240 260 0.96

2 10 0.018 3.2 10.3 0.9 1 23 273 295 273 295 0.97

3 10 0.00015 0.027 16.8 1.9 3 23 332 353 330 353 0.91

4 10 0.26 48 6.6 0.4 2 21 412 431 411 432 0.90

5 10 1e-05 0.0019 20.5 3.6 3 23 465 485 463 485 0.96

6 10 1.9e-06 0.00035 22.7 0.4 1 23 491 513 491 513 0.98

7 10 0.0038 0.7 12.4 6.8 1 19 519 537 519 542 0.91

8 10 9.5e-08 1.7e-05 26.8 0.7 1 23 548 570 548 570 0.99

9 10 7.5e-07 0.00014 24.0 2.0 1 23 576 598 576 598 0.99

10 10 1.4e-06 0.00025 23.2 0.9 1 23 604 626 604 626 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.062	11	8.6	0.1	1	19	240	258	240	260	0.96
2	10	0.018	3.2	10.3	0.9	1	23	273	295	273	295	0.97
3	10	0.00015	0.027	16.8	1.9	3	23	332	353	330	353	0.91
4	10	0.26	48	6.6	0.4	2	21	412	431	411	432	0.90
5	10	1e-05	0.0019	20.5	3.6	3	23	465	485	463	485	0.96
6	10	1.9e-06	0.00035	22.7	0.4	1	23	491	513	491	513	0.98
7	10	0.0038	0.7	12.4	6.8	1	19	519	537	519	542	0.91
8	10	9.5e-08	1.7e-05	26.8	0.7	1	23	548	570	548	570	0.99
9	10	7.5e-07	0.00014	24.0	2.0	1	23	576	598	576	598	0.99
10	10	1.4e-06	0.00025	23.2	0.9	1	23	604	626	604	626	0.97

Sequence Information

Coding Sequence: atggaaggATCTGACTCAAGCCGTGAACTTTTGGATAATGTAACTATGACAGAAGTATCGCCTCCTTTTATGATGCAGAGGATGGGAGTTGAGCCACAACTTCTCAGTGGTGAACTTCTGCAACCTCACAATGGTTTAGTTGTGGATatgacaaataatgaatatccgTTAGCTGTTAGTTATGCTGCCGAAGATTTATTAGATCATGATCTGACAGAAGAAGATCGTAACTTAGCTGCTGCACTTGTTGCTGTTCAACTTGTCCAGCAGCAAAAACAGCAACAACTCCATCAGGATTCAAATGTTATAGTTAGCACAAATTCTTTAGCATCTTTAGTTTCTTCCTCTCATCTAGaAAATGGTAAAGTAAACTTAACAGATCAACAACTTGTTATTTCGTCTGTTGATAAACCTGTGATATCTTCAATAAATAACGCATATATGAGCACAATTGAAGAAAGACATTTACATCATGATTCTCTTCCTATTATAAAAAAGTATGGTACCATACCCATAGATCCCAACGATAGATATTCGACTGattgtattaaaaatgagtACATTActataaaacatgaaaatgaggATTCGATTCAGCATCAGCGGGATTCAGACTGCGATAACAAaaACGATGTACGCTCATCTAAGAAAAGTCTTCCACATAAAAAGCGAATATCAcgtaaattaaaaaagaatataaCAGTTTCAAGAAAAGGGCATAAATGTACTGCTTGCGATCAAGGTTTTAATACAATAGAAGAACTAAATGTCCACAGTGCGTGCCATCCTGTAAATATTGTTGTGCAACCAAATCCGTTTTCCTGCCAAATATGCGGTGCTATGTGTAACGACCAATTACTGTTTTTTGAACACTTGAAAGCTCATTATGAACCAAACTTAGTTTCACAGCAGACAAAACAGAACGGCTCATCATCATCAAAATTAGAAGAACAAAAAGATTCCTTACTTAGCTCACTTCTGCAACCTTTAAGCTGTATTCATTGTGGTAAAAACTTCCGGAGGCAAAGAACTTTCGAAGCTCACATGAGAGATGTTCACAACAGAATAGAAGATGAATTCAGCGAACCTGAAGACCTTATGGAGGGAATCCGCAATGTGGTAGAAGCCAATAATCGCGATTCAGATGAAGATGGTCCCGATTCGAAGATTTGGTACCACGCTAATGGTTTGCAGGCAGAATCCAATCTTCAAGAATTCGATGTACAGGGCCAAGTTTGCCATTTATGTGGCCAAATTTTCACTTGCAATGAAGAAGTCATTCAACATATTCAGGAATGCAAGGCAAATATTGAAACTAAAATGGAACAAACGTCTGATTCGGAGTCAAAGAATAGAATTAGGAAAAAAAGACGAAAAAATGGGAATTTATTCTGCCCGCACTGTGATCGGGTGTTCAGTCACAGGAATTCTTTAATGTATCACATGAGGGGGCATACGGGAGAGCGGCCCCATCAGTGTGATATTTGTGGGAAGAGCTTTTTCGCTGCCAGTGCCCTCAAAgttcaTATACGCTTACATTCAGGAGACAAACCATATAAGTGCGAATATTGCGGTAGACATTTTAGGCAGTGCGGTGATTTGAAATATCATTGCATATCCATACATTCTGATGAAAAGCAATATCAGTGTGAATACTGTGGTAAAGATTTCGCCCGAAAATATTCCCTTATTGTTCATCGAAGAATTCATACAGGAGAAAAGAATTATCGTTGCGAATTTTGTGGAAAAACTTTCAGGGCGTCTTCTTATTTACAGAATCATCGAAGAATTCACAcaggTGAAAAGCCTCATCCTTGCGAAGTATGCGGTAAACCGTTTCGCGTTCGTTCGGATATGAAACGACATTTAAATACACACACACGTCGGAGAAATTCCGGTTCCCAACCTCCTAGATTAGCAAGTGCCACAACTGCTGTGATAGAAGTTCAGGATGCTGATAATTCAGAAAGTATTGTTCCTGATAACGATGAAGGGATAATAGACAATCAAGAACTACATATTGATAATGAAGAACAGGCGTCTGAAGAAAGCGTTCAATACCAAAGCCAAAGAGATCCTCTCGAAACTGTCAGAGAAGGGACAAATACTTTGTATGTTATGCCATTAATCAttacttaa
Protein Sequence: MEGSDSSRELLDNVTMTEVSPPFMMQRMGVEPQLLSGELLQPHNGLVVDMTNNEYPLAVSYAAEDLLDHDLTEEDRNLAAALVAVQLVQQQKQQQLHQDSNVIVSTNSLASLVSSSHLENGKVNLTDQQLVISSVDKPVISSINNAYMSTIEERHLHHDSLPIIKKYGTIPIDPNDRYSTDCIKNEYITIKHENEDSIQHQRDSDCDNKNDVRSSKKSLPHKKRISRKLKKNITVSRKGHKCTACDQGFNTIEELNVHSACHPVNIVVQPNPFSCQICGAMCNDQLLFFEHLKAHYEPNLVSQQTKQNGSSSSKLEEQKDSLLSSLLQPLSCIHCGKNFRRQRTFEAHMRDVHNRIEDEFSEPEDLMEGIRNVVEANNRDSDEDGPDSKIWYHANGLQAESNLQEFDVQGQVCHLCGQIFTCNEEVIQHIQECKANIETKMEQTSDSESKNRIRKKRRKNGNLFCPHCDRVFSHRNSLMYHMRGHTGERPHQCDICGKSFFAASALKVHIRLHSGDKPYKCEYCGRHFRQCGDLKYHCISIHSDEKQYQCEYCGKDFARKYSLIVHRRIHTGEKNYRCEFCGKTFRASSYLQNHRRIHTGEKPHPCEVCGKPFRVRSDMKRHLNTHTRRRNSGSQPPRLASATTAVIEVQDADNSESIVPDNDEGIIDNQELHIDNEEQASEESVQYQSQRDPLETVREGTNTLYVMPLIIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00029560;
90% Identity: -
80% Identity: -