Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022325.1:41763584-41766686[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.001 0.19 14.2 6.1 1 23 216 238 216 238 0.98

2 10 0.063 11 8.5 1.6 2 23 247 267 246 267 0.96

3 10 9.2e-07 0.00017 23.7 3.6 1 23 273 295 273 295 0.97

4 10 5.7e-06 0.001 21.3 1.5 1 23 301 323 301 323 0.99

5 10 1.7e-05 0.0031 19.8 2.0 1 23 329 351 329 351 0.98

6 10 0.00063 0.11 14.8 0.6 2 23 378 400 377 400 0.92

7 10 1.5e-07 2.8e-05 26.2 1.8 1 23 579 601 579 601 0.98

8 10 0.00014 0.025 16.9 8.3 1 23 607 629 607 629 0.98

9 10 3.3e-07 6e-05 25.2 1.0 1 23 635 657 635 657 0.97

10 10 0.0022 0.39 13.1 4.4 1 21 663 683 663 685 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.001	0.19	14.2	6.1	1	23	216	238	216	238	0.98
2	10	0.063	11	8.5	1.6	2	23	247	267	246	267	0.96
3	10	9.2e-07	0.00017	23.7	3.6	1	23	273	295	273	295	0.97
4	10	5.7e-06	0.001	21.3	1.5	1	23	301	323	301	323	0.99
5	10	1.7e-05	0.0031	19.8	2.0	1	23	329	351	329	351	0.98
6	10	0.00063	0.11	14.8	0.6	2	23	378	400	377	400	0.92
7	10	1.5e-07	2.8e-05	26.2	1.8	1	23	579	601	579	601	0.98
8	10	0.00014	0.025	16.9	8.3	1	23	607	629	607	629	0.98
9	10	3.3e-07	6e-05	25.2	1.0	1	23	635	657	635	657	0.97
10	10	0.0022	0.39	13.1	4.4	1	21	663	683	663	685	0.94

Sequence Information

Coding Sequence: ATGGAAAAATCTGAtcaattagtattaaattttcaaaaaatctgcCGAACTTGCTTGCGTGAAGGTAATATGGTCAATTTAAAGATTAACTGTGACGAAATTACTTGTTTGTTTgagaagttgatgtattgcaCGTTAATTCAGattgaACCTGATGATGGTTTGCCTTCACAGATATGTTCAAATTGTTTAGGGGAAATCAACAGTGCGTACAAATTTGCTAAAAGGTGCGAAAAGAGTGACAGATTTTTGAGAGATGTTTactcaaaattagaaaaattaggAGCCAGTGGAAGtctaataatcgataatactaaAGTAAACCAAACAAACCCGGAAGAAATATCAAGCATAACTATTAAAATTGAACCAGAAGACTCAGATGAATCCGAGGATATAATTGTTGATTTTGATTCTGAGACGTACACGGATCATActtatgaaaaacaaattagTGATATAATTATCAAGTCAAAAACTGCCGAAAAAATGAAAAACACTGGaaacaatgttgaaatttttaaaaattacgaCAAAGAACAAAATTCTCAAATTTCAGATAATTACAGTATTGAAAGCAATATTGACTTTTTAGAAAATCTCAGCACTAGCAACAAACTCAAAGTTAAAGAAAGTGATTCGtcatatatttgcaaaaaatgcgACACTTCTTTTTCTGAGTACCACGAACTAAAAATGCATCATAAATCACATGTAAATAAAAGTTATAACCGAAAACAATGTCCTATATGTGACAAAACATTGAGTTACGGACATTTTAAACCTCATCTTAGATCACATTTATCTGAAAAACGTTTTTGTTGTGAATATTGTGGAAAAAGGTTCAACCTCAGTAGCAATTTGATTCGGCATAGGCGCGTTCATTCCGGAGAAAAACCATATACGTGCGATATTTGCGGAAAATCGTTTATACAAAGCACCAGAATGCAAGAACATCGTAGGAAGCACACAGGCGAAAAACCCCACCAATGTTATCTATGCGGATTAGCGTTCGCACAATTTAGTAACTACACAATTCATATGAGGAAACATCGCCTAGAAGatattggAGTAAGAAAAGTTGGCAAATCAAGAAAATCAAGAGATTCCTCTGTAGTAACTGAAGATATAATGTGCAATATTTGCAACCaatattttccatcaaaaataCATTTGCAGACCCACATAGATGAAACACATCTTCAGAcccaaatagataaaatacatCTTCAGACTCGCGTAGATGAAACACATCTTCAGAATCACAGAAACGAAACACTTCTGCCGACCCACAGAGACAAATCACTTCTACCGACTCACATAGGCGTAACACTTATATCGAACCACAGAGACGAAACACTTCCACCGATTCACAGAGACGAAACACTTCTACAGACCCACAGAGACGAAGCACTTTTACCGGCTCACATAGAGGAAGCACTTCTCTCGACTAACATAGACGGAACACTTTTTTCGACCCACAGAGACAGATCACTTCTACCAACTCACATGGGCGAAACACTTCTATCGACTCACATAGATGGAGCTCTTCTATCGACTCATATAGAGGGAACAATTTTACCGAGCCACAGAGACGAAACACTTCTACAGATCCACAGTGACGAAACATTCCTGCAAACTCTTCCAGACGAATTTCAATCTGAAAATGGTCCTACCAATTTTTGGGAGCATCAAAAACTTGAAcgtgaaaaatttcaatttaaagaaCGTCGATTTCCTTGTGACATCTGCCAAAAAAGTTTTACTACCAAAAGTACtctgaaaaatcatatattcacTCATACCGGTGAAAAATTACACAAGTGCCACATTTGCCATAAGAGTTTTACACAATTAGGTCATTTAGGCTATCATTTGAGAGTTCACAGCGGTGAACAaccatttatttgtaaatattgtgGGAAAAGATTTTCTTTAAAAGGAAATTTGACTGTTCATCTAAGACTTCATACTGGGGAGACGCCTTATGTTTGTAATCTCTGTGGGAAGGGATATCACGATTCAAGTGGTCTGAAGAAACATAAAAAAtgtcatacaaaaaaattaagaaatattttaaaataa
Protein Sequence: MEKSDQLVLNFQKICRTCLREGNMVNLKINCDEITCLFEKLMYCTLIQIEPDDGLPSQICSNCLGEINSAYKFAKRCEKSDRFLRDVYSKLEKLGASGSLIIDNTKVNQTNPEEISSITIKIEPEDSDESEDIIVDFDSETYTDHTYEKQISDIIIKSKTAEKMKNTGNNVEIFKNYDKEQNSQISDNYSIESNIDFLENLSTSNKLKVKESDSSYICKKCDTSFSEYHELKMHHKSHVNKSYNRKQCPICDKTLSYGHFKPHLRSHLSEKRFCCEYCGKRFNLSSNLIRHRRVHSGEKPYTCDICGKSFIQSTRMQEHRRKHTGEKPHQCYLCGLAFAQFSNYTIHMRKHRLEDIGVRKVGKSRKSRDSSVVTEDIMCNICNQYFPSKIHLQTHIDETHLQTQIDKIHLQTRVDETHLQNHRNETLLPTHRDKSLLPTHIGVTLISNHRDETLPPIHRDETLLQTHRDEALLPAHIEEALLSTNIDGTLFSTHRDRSLLPTHMGETLLSTHIDGALLSTHIEGTILPSHRDETLLQIHSDETFLQTLPDEFQSENGPTNFWEHQKLEREKFQFKERRFPCDICQKSFTTKSTLKNHIFTHTGEKLHKCHICHKSFTQLGHLGYHLRVHSGEQPFICKYCGKRFSLKGNLTVHLRLHTGETPYVCNLCGKGYHDSSGLKKHKKCHTKKLRNILK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -