Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022329.1:50638987-50646181[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00012 0.021 17.1 1.1 2 21 50 69 49 70 0.94

2 15 0.037 6.7 9.3 0.2 2 23 78 100 77 100 0.94

3 15 0.15 28 7.3 0.3 1 23 104 126 104 126 0.98

4 15 0.00024 0.044 16.1 4.3 1 23 134 156 134 156 0.98

5 15 7.8e-06 0.0014 20.8 0.2 2 23 163 184 162 184 0.96

6 15 2e-07 3.7e-05 25.8 1.3 2 23 191 212 190 212 0.97

7 15 1.2e-06 0.00022 23.3 2.1 1 23 218 240 218 240 0.98

8 15 0.00046 0.083 15.3 0.1 1 21 298 318 298 319 0.95

9 15 0.095 17 8.0 2.5 2 23 329 351 328 351 0.92

10 15 0.035 6.3 9.3 0.6 1 23 355 377 355 377 0.95

11 15 0.00065 0.12 14.8 2.6 1 23 385 407 385 407 0.99

12 15 0.00026 0.047 16.0 0.1 3 23 415 435 413 435 0.97

13 15 9.9e-07 0.00018 23.6 2.3 1 23 441 463 441 463 0.98

14 15 5.7e-07 0.0001 24.4 1.3 1 22 469 490 469 490 0.97

15 15 0.00054 0.099 15.0 2.5 1 23 497 519 497 519 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00012	0.021	17.1	1.1	2	21	50	69	49	70	0.94
2	15	0.037	6.7	9.3	0.2	2	23	78	100	77	100	0.94
3	15	0.15	28	7.3	0.3	1	23	104	126	104	126	0.98
4	15	0.00024	0.044	16.1	4.3	1	23	134	156	134	156	0.98
5	15	7.8e-06	0.0014	20.8	0.2	2	23	163	184	162	184	0.96
6	15	2e-07	3.7e-05	25.8	1.3	2	23	191	212	190	212	0.97
7	15	1.2e-06	0.00022	23.3	2.1	1	23	218	240	218	240	0.98
8	15	0.00046	0.083	15.3	0.1	1	21	298	318	298	319	0.95
9	15	0.095	17	8.0	2.5	2	23	329	351	328	351	0.92
10	15	0.035	6.3	9.3	0.6	1	23	355	377	355	377	0.95
11	15	0.00065	0.12	14.8	2.6	1	23	385	407	385	407	0.99
12	15	0.00026	0.047	16.0	0.1	3	23	415	435	413	435	0.97
13	15	9.9e-07	0.00018	23.6	2.3	1	23	441	463	441	463	0.98
14	15	5.7e-07	0.0001	24.4	1.3	1	22	469	490	469	490	0.97
15	15	0.00054	0.099	15.0	2.5	1	23	497	519	497	519	0.94

Sequence Information

Coding Sequence: ATGATTGTATTTATCTGGTATGACTATCTGATCTTAGACAAaGCAGCAGAATACGATAAGATATACCGAGAAGATAGAAAAACAGGAACGTTTGCgctcaaaaaattaattcttaaaCGTGTTAAAGTGCCCAAAAGAGCAACAGATAAGTGCAGAATATGTCAAAAAGAATTTACTAATAAACGTTATTACGAAAGACATATTCAAAGATTCCCGCCAGATATTGTAGTACCTTGTCCAAGATGTGAACGAAAATTCCACTCACAAGAAGCAATATTAGTTCACGTAATGAGTGATCATGACAAGAATTTCAAGTGTTATAGTTGCGCACTAAAATTCGAAAATGGAAATGAATTAAAAGATCATGCAAATATTCACAATTCGGATCCATCAGCAAGATTTCAATGTGAATTTTGCGGAAAAAGATTTTGTACTAGACAATCTGCATTTGTACATCGGCGAATACATCTAGATATGCGTTCTTTAATATGTGATATTTGTGGAAAGAAATTATCTAGTAAAGATAAATTGGTTCTACACATGCGCATTCATAAAGGTGAGAAACCAGTATCTTGTGAACAATGCGGAAAAAATTTCACAACAGCCCATTCGTTGAAAGTTCATATGAGAGTTCATACAGGAGAGAAACCATATGCCTGTCCTCACTGCGCCAAACGATTCAGCCAGAAAAACACCCTTACGATTCACATCAGGCGACATACAGGAGAAAAACCTTTCGTTTGTAATTTGTGTAATGATAAATTCGTCGTGAAATATCGTTATTATTTCAGAGCGAAAAGACGTATTAAAAACTCCCAAGAAGCTGCTTATGCAATGGATCcagaattttcattcaaaaaaattatgcttaAACTACAAAAAGACAAAACATTCGAGTGTTCGATTTGCAGTAGAATTTTTGCAACTCGAAAAGCTTTGGCAAGTCACGTCAAGCGATTTCCACCAGATATTTCTGAACCAATATCCTGCGAAAAATGTGAACGGAAATTTCACAGTAAACATGACGTATCAGTTCATGTAGTTAGAGAccatgataaaaatttcaagTGCTTCAGCTGTGGACAGAAATTCGATAGTGGAAATGAAGTAAAAAAACATGCAGATATCCATAATACTGAGCCAGTAGCGAAATATCAATGCGAATTTTGTGGAAAAAGATCTCGCACTAAACAGTCTGCTTTTACCCATCGTCGAATTCATttcgataagttctcaataatATGCGAAATTTGTGGAACACAATTATCTAGTAGAGAAAAACTAGTTTTACACATGCGCATTCATACTGGAGAAAAACCATACTCATGTGAATTCTGTGGTAAAAATTTTACTAGATCTTACACATTAAGGTTACATACGAGAATTCATACTGGCGAAAAACCATATTCATGTAATATTTGTGGTAAATGTTTCAGTCAGAAAAGTGCCATCAATGAACACATGCGTAGACGTGCTGGAAGGAAAACATATTATTGTACGATGTGCGATAAAAAATTCTGCAGTGGTGCTCAACTGAAAAACCATTCAGTCATTCACACCGAACAACAAATGCAATAA
Protein Sequence: MIVFIWYDYLILDKAAEYDKIYREDRKTGTFALKKLILKRVKVPKRATDKCRICQKEFTNKRYYERHIQRFPPDIVVPCPRCERKFHSQEAILVHVMSDHDKNFKCYSCALKFENGNELKDHANIHNSDPSARFQCEFCGKRFCTRQSAFVHRRIHLDMRSLICDICGKKLSSKDKLVLHMRIHKGEKPVSCEQCGKNFTTAHSLKVHMRVHTGEKPYACPHCAKRFSQKNTLTIHIRRHTGEKPFVCNLCNDKFVVKYRYYFRAKRRIKNSQEAAYAMDPEFSFKKIMLKLQKDKTFECSICSRIFATRKALASHVKRFPPDISEPISCEKCERKFHSKHDVSVHVVRDHDKNFKCFSCGQKFDSGNEVKKHADIHNTEPVAKYQCEFCGKRSRTKQSAFTHRRIHFDKFSIICEICGTQLSSREKLVLHMRIHTGEKPYSCEFCGKNFTRSYTLRLHTRIHTGEKPYSCNICGKCFSQKSAINEHMRRRAGRKTYYCTMCDKKFCSGAQLKNHSVIHTEQQMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -