Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022329.1:50615086-50621912[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0058 1.1 11.8 5.0 1 23 29 51 29 51 0.95

2 15 8.5e-05 0.016 17.6 5.3 1 23 57 79 57 79 0.98

3 15 0.00015 0.027 16.8 0.1 2 23 88 109 87 109 0.97

4 15 1.5e-06 0.00028 23.1 1.5 2 23 116 137 115 137 0.97

5 15 1.3e-07 2.3e-05 26.5 2.0 1 23 143 165 143 165 0.99

6 15 3.9e-06 0.00071 21.8 1.2 1 23 241 263 241 263 0.98

7 15 0.00033 0.06 15.7 1.2 1 23 269 291 269 291 0.98

8 15 0.19 35 7.0 0.8 2 21 297 316 296 317 0.92

9 15 0.11 20 7.7 1.3 1 23 324 347 324 347 0.88

10 15 0.0019 0.35 13.3 1.1 1 23 351 374 351 374 0.95

11 15 0.0001 0.019 17.3 0.6 1 23 382 405 382 405 0.98

12 15 7.9e-05 0.014 17.7 0.1 3 23 413 433 412 433 0.97

13 15 5.8e-06 0.0011 21.2 0.9 1 23 439 461 439 461 0.97

14 15 7.1e-08 1.3e-05 27.3 1.9 1 23 467 489 467 489 0.98

15 15 0.0021 0.38 13.2 2.7 1 23 495 518 495 518 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0058	1.1	11.8	5.0	1	23	29	51	29	51	0.95
2	15	8.5e-05	0.016	17.6	5.3	1	23	57	79	57	79	0.98
3	15	0.00015	0.027	16.8	0.1	2	23	88	109	87	109	0.97
4	15	1.5e-06	0.00028	23.1	1.5	2	23	116	137	115	137	0.97
5	15	1.3e-07	2.3e-05	26.5	2.0	1	23	143	165	143	165	0.99
6	15	3.9e-06	0.00071	21.8	1.2	1	23	241	263	241	263	0.98
7	15	0.00033	0.06	15.7	1.2	1	23	269	291	269	291	0.98
8	15	0.19	35	7.0	0.8	2	21	297	316	296	317	0.92
9	15	0.11	20	7.7	1.3	1	23	324	347	324	347	0.88
10	15	0.0019	0.35	13.3	1.1	1	23	351	374	351	374	0.95
11	15	0.0001	0.019	17.3	0.6	1	23	382	405	382	405	0.98
12	15	7.9e-05	0.014	17.7	0.1	3	23	413	433	412	433	0.97
13	15	5.8e-06	0.0011	21.2	0.9	1	23	439	461	439	461	0.97
14	15	7.1e-08	1.3e-05	27.3	1.9	1	23	467	489	467	489	0.98
15	15	0.0021	0.38	13.2	2.7	1	23	495	518	495	518	0.98

Sequence Information

Coding Sequence: ATGGATTTAGAATATATTAGAATCCTGCACGCAGCTGATAATTTTGCATCAGTATTAGGTCCTAGTAACCGTTATCGGAAAGTTTATAATTGTGTTTATTGCTCAAAAACATTTTGTCGACGGAGTAGGTTTATTCAACACAGTTCAATTCACATGATAACCAAACCATTTGAGTGTAAAAAATGTCAGAAACATTTCAAAACTGAATATGCTTTAAGAGTTCACAAGAACAAACATTTAGAAAACGCTTATTCTTGTGctGTTTGTGATTTATGTGGAAAAGAATTGTCGTCTAAACGATCGTTACAAGATCATTTATTGATGCATTATGGTGAAAAACCGTTGACCTGTGAACAATGTGGAAAAACTTTTACGAAAATTAACACTCTCAAAGTTCACATGCGAAAACATACAGGTGAAAAACCTTATACTTGCCAGATTTGTGAAAAATCTTTTACTCAAAGTAGTTCATTGAAAATGCACGTCAGAAAGCATACCGGTGATAAACCATATTCGTGTACATTTTGTTCTGATGCTTTTGTTAGTCGATCTGAAGAAGTTTCCGTAAACGTAGATTTAGAGTACATTAAGATATTAAATGAATCTGATAATTGTACAAGTGATTCTGATAATTGTGCAACTGAACCAGAAAATTGTGCAGCTGAATCTGAAACTTATGCAACTGCTTGCATGCAGAAAAATAGCAGAGTAAAAAAACTGTATCCATGTGCTTCATGTCCAGAAACTTTCCGAAGGCGCAAAGATTTTATGAAGCACATGAGAAGTCACAATCAAGTAAATGGTTTTCAGTGTCCTGTTTGTAAGAAAATTTACAAAACCAAATATATTCTATCATCTCATGTGAAGATGCACACATTGAAACCATTAAAATGTGATAATTGCCAAAGACAGTTCatttggaataataatttcaagcaaCATGTTCAGAAATGCGCTCTGAGAAAAAGATTTCCATGTGAAAAATGTgacgaaaaatttattgatgaacacgataaaaagtttcatattttacGAGAACACGAAAAACACTTTGCTTGCTTTTCCTGTAAAGAGTCATTTACTGATAACCAAACTCTTCTAATGcacataaattattatcatgCAGATGTAGGCAACGGAGAATTCAAATGTGAATTTTGCGGAATGGGATTTCCGAACGCAATGTACATGAAAGACCATATGAAAAGACAACATCTTCACACTAGAGTTAGAATTTGCGAAATTTGTGGCAAACATATAGCAAATGCTGCTAATCTAAACGAACATATGTTGGTACACACGAACGAAAAACCGCATTCTTGCGAAATTTGTGGacaaatttttcgaaaaaaaactaGCCTGGTTGTGCACCTTCGAGTTCATACTGGAGAAAAACCTTACACTTGTCAGATATGTGGAAAAAGTTTTACCCAAAGTAGTACCCTAAGGATACATAATAGACGACACACTGGAGAAAGACCGTACGAATGCgatatttgttttaataaatttttcaccaGAAATCTACTAAATGTACACCGAAGAAAGAAGCATGAAAAAAACGATGATTTGTTATCAACTATTGAAGGACATCATCTGGAACTAAAGTAA
Protein Sequence: MDLEYIRILHAADNFASVLGPSNRYRKVYNCVYCSKTFCRRSRFIQHSSIHMITKPFECKKCQKHFKTEYALRVHKNKHLENAYSCAVCDLCGKELSSKRSLQDHLLMHYGEKPLTCEQCGKTFTKINTLKVHMRKHTGEKPYTCQICEKSFTQSSSLKMHVRKHTGDKPYSCTFCSDAFVSRSEEVSVNVDLEYIKILNESDNCTSDSDNCATEPENCAAESETYATACMQKNSRVKKLYPCASCPETFRRRKDFMKHMRSHNQVNGFQCPVCKKIYKTKYILSSHVKMHTLKPLKCDNCQRQFIWNNNFKQHVQKCALRKRFPCEKCDEKFIDEHDKKFHILREHEKHFACFSCKESFTDNQTLLMHINYYHADVGNGEFKCEFCGMGFPNAMYMKDHMKRQHLHTRVRICEICGKHIANAANLNEHMLVHTNEKPHSCEICGQIFRKKTSLVVHLRVHTGEKPYTCQICGKSFTQSSTLRIHNRRHTGERPYECDICFNKFFTRNLLNVHRRKKHEKNDDLLSTIEGHHLELK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -