Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022333.1:41802788-41808162[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00023 0.041 16.2 0.0 1 23 118 141 118 141 0.95

2 16 8.5e-05 0.015 17.6 1.5 1 20 146 165 146 169 0.92

3 16 2.9e-05 0.0052 19.0 0.1 1 23 187 209 187 209 0.98

4 16 7.9e-05 0.014 17.7 2.6 1 23 221 244 221 244 0.96

5 16 0.0065 1.2 11.6 1.3 1 23 253 276 253 276 0.93

6 16 0.077 14 8.2 0.0 1 23 287 309 287 309 0.97

7 16 0.13 24 7.5 0.2 1 21 322 342 322 345 0.89

8 16 1.4e-06 0.00025 23.2 0.1 1 23 365 389 365 389 0.98

9 16 0.13 25 7.5 2.2 2 23 396 418 395 418 0.95

10 16 1.5e-06 0.00028 23.1 1.9 1 23 424 446 424 446 0.98

11 16 0.00014 0.026 16.8 0.4 1 23 452 474 452 474 0.98

12 16 0.00047 0.085 15.2 1.5 1 23 480 502 480 502 0.98

13 16 0.001 0.19 14.2 1.4 1 23 508 530 508 530 0.98

14 16 0.0098 1.8 11.1 0.6 1 23 536 558 536 558 0.97

15 16 1.9e-07 3.5e-05 25.9 1.9 1 23 564 586 564 586 0.97

16 16 0.044 8 9.0 0.1 1 14 592 605 592 607 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00023	0.041	16.2	0.0	1	23	118	141	118	141	0.95
2	16	8.5e-05	0.015	17.6	1.5	1	20	146	165	146	169	0.92
3	16	2.9e-05	0.0052	19.0	0.1	1	23	187	209	187	209	0.98
4	16	7.9e-05	0.014	17.7	2.6	1	23	221	244	221	244	0.96
5	16	0.0065	1.2	11.6	1.3	1	23	253	276	253	276	0.93
6	16	0.077	14	8.2	0.0	1	23	287	309	287	309	0.97
7	16	0.13	24	7.5	0.2	1	21	322	342	322	345	0.89
8	16	1.4e-06	0.00025	23.2	0.1	1	23	365	389	365	389	0.98
9	16	0.13	25	7.5	2.2	2	23	396	418	395	418	0.95
10	16	1.5e-06	0.00028	23.1	1.9	1	23	424	446	424	446	0.98
11	16	0.00014	0.026	16.8	0.4	1	23	452	474	452	474	0.98
12	16	0.00047	0.085	15.2	1.5	1	23	480	502	480	502	0.98
13	16	0.001	0.19	14.2	1.4	1	23	508	530	508	530	0.98
14	16	0.0098	1.8	11.1	0.6	1	23	536	558	536	558	0.97
15	16	1.9e-07	3.5e-05	25.9	1.9	1	23	564	586	564	586	0.97
16	16	0.044	8	9.0	0.1	1	14	592	605	592	607	0.88

Sequence Information

Coding Sequence: ATGGCAGAAATAGCTGTTGAACAATGTAGAACGTGTTTAATTAAagaagttgagatgatttcgtTGATGGCAGATCATGTCGTTTGCGATAAGGTTATGTCTGTCattgaattaataaaaacttGTACTTCAGTACAGATTGAATTTGAAGATGGTTTTCCCCAATTTATTTGCGTGGATTGCATACATTCAGCTGAAAAATCGTATGAATTTAGGATACAGTGTGAGAAAGCTGACAATTCGTTAAGGAAGTTTGATGAAATTGGGAATTTGGAAGCCACTGAATTAATTAACCTTTTGCACGATAAAGATAGTATTAAGTGCGAAGAAGTCGATATTGCGGATACTAATTTTACTTGTACGGTTTGTGGATTGATTTTTCCGAGTAGTGCGGCATTAGCTAAACATGCAAGTGTGGCACATCAACCGAATTTTTATCAGTGCTCGTATTGTTCTGTGAGCTTTATCACGCCCGATTTATTGAAGAAACATCTTCCAAAACATCATGATAGAGCTAGAAAAGGGTTGAAGAATGGGCGGAAAAGGCGGCGGGTTGAATTTATTTGTGCAGTTTGTGGCAAGAAGTACGCAACTTTAGGTAGTTTAAATGGACATATACGGAAGCATTCGTCCGGTAAGACAAATTCTAATAGCCCTATTTTCATTTGTCATGATTGTGACCAACATTTCGAGTCCAGTTCTGATTTACAAATGCATTTTGAAACGATACATAACCTCAAAAGGGAAGAAGTGCGATTTAAATGTAAATGCtgctataaaatatttgaaagtgaGGATAATTTGCGGGATCACATTGCGGCGGAGCATAAGAAGAAAATACAACCAAACAAAGTGTCATATAAATGCAAGATTTGCGAGGAAATGTCAGCAACGCTTCCGGGTATTAAAGATCATTTATCGGTACATAATATAGCCtcaaaagatatttttaataatctttTATATCAATGTTCGGAATGCGCGGAAGATTTTCCATCTGTTTACGATTTTTTCACACATAATTCCGCCGTACATTCTGGCATAAAAGTTGAGAATTCAGTCGCCGGCACGCGAGTTGTAAGGAATCGCCCTTATTCTTGTACTATAGCAGATTGCGATAAAGCATTTCCTTCGCCGAGCGCTTTGAAAAAGCATATATCAAGCCACCAGTCGCAATGGCCGAAAAAATGCCGATATTGCGATACAATAGTCGAAAAATGGCACGATTATATGACGCACTTGAATCAAAAACATGACGATAGTAAAACTTTTATTTGTGCACAATGCGGGAAGAAGTTTTTCCGGGAACGGAACCTTCAAAGTCATATGAAAACTCACACGGGGGAAAGAAATTACATGTGCGACTTTTGCGGGTTTAGTTTTCAAGCGCAAAATAATTTGGTGGCTCATCGACGTATCCACACGGGAGTTAAGCCCTATAAATGTACTTTTTGCTCGCAAGCGTTTGCTCAACACGCAGGGCTCCGTTCGCATTTATTAAACCACAACGGAGAAAAGAAACACGAATGCCCAACATGTTTAAAGAAATTTCTACGGCTGGGAGCGCTCCGAAACCACATAAAAACACACACAGGAGTCAAAGATTACGCTTGTCATATTTGCGGGGCCCTATTTGGAGCCTCCTCAACCCGAAAAAAGCATCTATTGACGCATACAGgcGAAAGAAACCACGTCTGTGATTTTTGCGGGAAAGCATTCTCTCGCAGATCAAACCTAAACGTTCACCGAAAAATACACACGGGGGAAACGCCTCATGTGTGCGATATATGCGGAAAAGGCTTCATACAAGCTCACGAAACCTTTGAAAATGAACCAATTGAATCACCAGACGATGTCGAAGATGATGCTATTATCGACAGCTCTGAGGATAGTTGCGACGAAAATGAATACGGATCAGACACCACAGAAGCCCTTAACGATTTCGATCagtga
Protein Sequence: MAEIAVEQCRTCLIKEVEMISLMADHVVCDKVMSVIELIKTCTSVQIEFEDGFPQFICVDCIHSAEKSYEFRIQCEKADNSLRKFDEIGNLEATELINLLHDKDSIKCEEVDIADTNFTCTVCGLIFPSSAALAKHASVAHQPNFYQCSYCSVSFITPDLLKKHLPKHHDRARKGLKNGRKRRRVEFICAVCGKKYATLGSLNGHIRKHSSGKTNSNSPIFICHDCDQHFESSSDLQMHFETIHNLKREEVRFKCKCCYKIFESEDNLRDHIAAEHKKKIQPNKVSYKCKICEEMSATLPGIKDHLSVHNIASKDIFNNLLYQCSECAEDFPSVYDFFTHNSAVHSGIKVENSVAGTRVVRNRPYSCTIADCDKAFPSPSALKKHISSHQSQWPKKCRYCDTIVEKWHDYMTHLNQKHDDSKTFICAQCGKKFFRERNLQSHMKTHTGERNYMCDFCGFSFQAQNNLVAHRRIHTGVKPYKCTFCSQAFAQHAGLRSHLLNHNGEKKHECPTCLKKFLRLGALRNHIKTHTGVKDYACHICGALFGASSTRKKHLLTHTGERNHVCDFCGKAFSRRSNLNVHRKIHTGETPHVCDICGKGFIQAHETFENEPIESPDDVEDDAIIDSSEDSCDENEYGSDTTEALNDFDQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -