Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022325.1:62120803-62126943[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.5e-05 0.0065 18.8 6.6 1 23 44 66 44 66 0.98

2 13 1.3e-07 2.3e-05 26.5 2.6 1 23 72 94 72 94 0.99

3 13 0.00023 0.042 16.2 3.3 1 23 100 122 100 122 0.98

4 13 0.0014 0.25 13.8 7.7 1 23 128 150 128 150 0.97

5 13 3.4e-06 0.00062 22.0 1.8 1 23 156 178 156 178 0.98

6 13 2.4e-06 0.00044 22.4 0.9 1 23 189 212 189 212 0.97

7 13 8.9e-05 0.016 17.5 0.5 1 23 333 355 333 355 0.99

8 13 0.0001 0.019 17.3 3.9 1 19 361 379 361 379 0.99

9 13 0.00012 0.023 17.0 5.4 1 23 389 411 389 411 0.98

10 13 2e-06 0.00036 22.7 3.0 1 23 417 439 417 439 0.98

11 13 3.3e-07 5.9e-05 25.2 2.5 1 23 445 467 445 467 0.99

12 13 5.4e-05 0.0098 18.2 5.2 1 23 473 495 473 495 0.98

13 13 3.9e-05 0.0071 18.6 0.9 2 23 502 523 501 523 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.5e-05	0.0065	18.8	6.6	1	23	44	66	44	66	0.98
2	13	1.3e-07	2.3e-05	26.5	2.6	1	23	72	94	72	94	0.99
3	13	0.00023	0.042	16.2	3.3	1	23	100	122	100	122	0.98
4	13	0.0014	0.25	13.8	7.7	1	23	128	150	128	150	0.97
5	13	3.4e-06	0.00062	22.0	1.8	1	23	156	178	156	178	0.98
6	13	2.4e-06	0.00044	22.4	0.9	1	23	189	212	189	212	0.97
7	13	8.9e-05	0.016	17.5	0.5	1	23	333	355	333	355	0.99
8	13	0.0001	0.019	17.3	3.9	1	19	361	379	361	379	0.99
9	13	0.00012	0.023	17.0	5.4	1	23	389	411	389	411	0.98
10	13	2e-06	0.00036	22.7	3.0	1	23	417	439	417	439	0.98
11	13	3.3e-07	5.9e-05	25.2	2.5	1	23	445	467	445	467	0.99
12	13	5.4e-05	0.0098	18.2	5.2	1	23	473	495	473	495	0.98
13	13	3.9e-05	0.0071	18.6	0.9	2	23	502	523	501	523	0.97

Sequence Information

Coding Sequence: ATGCCACGAACAGGTGTGATCAGCTGTGATAGCGTCATTAGTGTAGGAACGGTGCGAGAGACACTAAATCAATCATACCCAATCAATTTAACATATTCCCCCGACATCAAAGAGCAAAAAGATCTAAAATTCCAATGCTCTGACTGTAACAAACTATTCCGCACCTCCCACCACTTGAAAGTCCACAGCCGGATGCACACAGGAAAACGTCCTTACCagtgtgaaatttgcaacaaatcattcaaacagCAGCCACATTTAAAAGCACACGAAAAAACGCATTCTGGTGTAAGACCTTACGTCTGCGACATTTGCAGCAAATCTTTTACATTAGTACAGCATTTGAAGACCCACCTTCACATACACACAGGGGAACGGCCCCATGAATGCGACGTTTGTCACAAAAGGTTTACCGAAAAATGTACTTTGAAGGTTCATAAAAGAATTCATGAAAGGGCGGAGCCTTATAAATGCACGCAATGTGAGAGGACTTTTAAGGTATCCGGAAATTTAAGTAGACATTTGAAATTACATGAAGATAAACGATACGAAGtTGAAAAACCGTTTGCGTGTCCAATTTGCGACAAACGTTTCACAAAATCCCGAGGTTTAGTAAAACACAAACGAAAAATTCACGGAATTCGCAGCGCAAGAAGAGTAGAAAGAATTTATTTAGATAATCCCTCGGATGGAAAACCTCCAGACGAAAAATTACCAGATAAATCTTCAAACGAAAAATCTTTAGATAACGACTATTCTTCGGACAGAGTTGAAAATCTTGAGCCAGAATGTGATTTACAGTCAGAAAACTCTGAATCAAGCGATGAAAAAAAGAAAGATTTCAGTGAAGTTAAAAAAGAACGAAGAGAAGGTGCTGGAGATGCCACAGGAGTCCAAATGCATTTTTTATCAGAAGGAATGGATATTGAAGAGGATGGTTTCAATGAAGACGatatTAATTCGGATTCACAAGACCAGGACCCTAATTTTCCGGAATTTAAGTGCTCGATATGTGCCAAAATTTTATCTACCAAAAGGGCTTTACGTATTCATACAAGAATACACAGCGGGGAACGCCCTTATAAATGTACAACTTGTAACAAAACATTTAAGCAATTGTACCATCTCAAAGTTCATGATCTTTGCCATACAGGGGAGAAACCTCACAAATGTGAGATTTGTAGCAAGCAATTTTATACAATGCCCCATTTAACGCGCCACCGTCGAATACACAACAACGAACGTCCTTACCATTGTACTTACTGCGAAAAAACCTTCACAGAAAGCGGAAATTTAGGTCGCCATCTACGAACACATACCGGCGAGAAACGCTACGAATGCCATATCTGTCAAAAATCCTTCACCTATTCAGATGTTTTAAAAAAACATATCCGTATTCATACGGGAGATAAGCCGTACTCGTGCGATTTGTGTgacaagaaatttttcactAATTTTCACCTTCAAACACATAAAAGAATTCATGAGAATTTAAAGCCGATTGAGTGTTCGATATGTAGGCGACATTTTAGATCACAAATTAATTTAGGAAGACATATGATTGTACATGGAATACATGTGCAAGAAACTGAAGATGAAATagaaattaaacaagaaaatattgatggGATTGCGGCAAAAAATGAAGAGATGTCCGAAAATGATGGGGAAgaagaaaattga
Protein Sequence: MPRTGVISCDSVISVGTVRETLNQSYPINLTYSPDIKEQKDLKFQCSDCNKLFRTSHHLKVHSRMHTGKRPYQCEICNKSFKQQPHLKAHEKTHSGVRPYVCDICSKSFTLVQHLKTHLHIHTGERPHECDVCHKRFTEKCTLKVHKRIHERAEPYKCTQCERTFKVSGNLSRHLKLHEDKRYEVEKPFACPICDKRFTKSRGLVKHKRKIHGIRSARRVERIYLDNPSDGKPPDEKLPDKSSNEKSLDNDYSSDRVENLEPECDLQSENSESSDEKKKDFSEVKKERREGAGDATGVQMHFLSEGMDIEEDGFNEDDINSDSQDQDPNFPEFKCSICAKILSTKRALRIHTRIHSGERPYKCTTCNKTFKQLYHLKVHDLCHTGEKPHKCEICSKQFYTMPHLTRHRRIHNNERPYHCTYCEKTFTESGNLGRHLRTHTGEKRYECHICQKSFTYSDVLKKHIRIHTGDKPYSCDLCDKKFFTNFHLQTHKRIHENLKPIECSICRRHFRSQINLGRHMIVHGIHVQETEDEIEIKQENIDGIAAKNEEMSENDGEEEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -