Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022325.1:59547832-59551190[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.9 5.3e+02 3.3 0.4 5 23 168 187 165 187 0.89

2 14 0.89 1.6e+02 4.9 0.1 6 23 195 212 193 212 0.93

3 14 1.1e-06 0.0002 23.5 2.5 1 23 218 240 218 240 0.98

4 14 0.00032 0.059 15.7 3.3 1 23 246 268 246 268 0.99

5 14 5.2e-08 9.5e-06 27.7 1.0 1 23 274 296 274 296 0.99

6 14 3.3e-05 0.0061 18.8 0.5 1 22 302 323 302 326 0.91

7 14 1.2e-07 2.1e-05 26.6 0.7 3 23 382 402 381 402 0.99

8 14 1.2e-06 0.00021 23.4 1.2 1 23 408 430 408 430 0.99

9 14 2.8e-06 0.00051 22.2 1.8 1 23 436 458 436 458 0.97

10 14 1.6e-05 0.0029 19.9 2.8 2 23 464 485 464 485 0.98

11 14 1.8e-06 0.00033 22.8 0.6 1 23 491 513 491 513 0.96

12 14 6.7e-07 0.00012 24.2 2.7 1 23 519 541 519 541 0.99

13 14 1.8e-05 0.0033 19.7 3.1 1 23 547 569 547 569 0.98

14 14 0.00063 0.11 14.8 1.9 1 23 580 603 580 603 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.9	5.3e+02	3.3	0.4	5	23	168	187	165	187	0.89
2	14	0.89	1.6e+02	4.9	0.1	6	23	195	212	193	212	0.93
3	14	1.1e-06	0.0002	23.5	2.5	1	23	218	240	218	240	0.98
4	14	0.00032	0.059	15.7	3.3	1	23	246	268	246	268	0.99
5	14	5.2e-08	9.5e-06	27.7	1.0	1	23	274	296	274	296	0.99
6	14	3.3e-05	0.0061	18.8	0.5	1	22	302	323	302	326	0.91
7	14	1.2e-07	2.1e-05	26.6	0.7	3	23	382	402	381	402	0.99
8	14	1.2e-06	0.00021	23.4	1.2	1	23	408	430	408	430	0.99
9	14	2.8e-06	0.00051	22.2	1.8	1	23	436	458	436	458	0.97
10	14	1.6e-05	0.0029	19.9	2.8	2	23	464	485	464	485	0.98
11	14	1.8e-06	0.00033	22.8	0.6	1	23	491	513	491	513	0.96
12	14	6.7e-07	0.00012	24.2	2.7	1	23	519	541	519	541	0.99
13	14	1.8e-05	0.0033	19.7	3.1	1	23	547	569	547	569	0.98
14	14	0.00063	0.11	14.8	1.9	1	23	580	603	580	603	0.96

Sequence Information

Coding Sequence: ATGAAATCTGTGTTTCTAAATAGTGATGATTGTGGGGATTCAGATatacaattatttaaaatgtttgAGTGTTGTGCGTCTATAGagaTTAGCGAGAATGATGGTCTTCCTGCTGTGATTTGTTTGGCGTGTGAATTGAGGTTAAACAGCGCGTATAATTTTCGTGAATTGTGCCAAAGGTCCAATATAACCTTAAGAAAATACATAGAAAATGCAATGcGATATAATGTGAAGCAAGAAGTAGCAAACGATAACAAAAATGTGATACAAGATAGTGAGCCAATTGGAGAAACTGAGATTGAATATATTGAATCAGTATTTGAAGATGATATAAAGTCAGATAACGATGaacataataatgaaaatagtgATGATTCCGACGAAAAACCTTTGAAATCCAGAAATAAGGGAAAAGTTATTTTATCGTcttatgatgaagaaattgtaAATCAAGCCATAGAAGAAactaaaaaaaagaataataaaagaagagaatgcATAGTTTGTGGATTCATTTCTTCTAATTCTAGAGGACTTTCGTTGCATATTTCCCATTTACACAAAGAATTAAAGGAGAGATGGTGTAATATTTGCTTTGAACAAGTGGAAGATCTCGCCTCTCATTCAAAAGAACACAATAAAGCTAGATCTTTTTCTTGTTCTTTGTGTGAAAAATCCTTTTCTTATCAGGGCCATTTAACAGAACACATACGAAGTCATTCTGTTCAACGACCTTATAAATGTAAGGAATGCAAAAAGGGATTTTTATCGTCAAGACATCTGAGGGTTCATGAAAGAATCCATTCTGGGGAAAAACCATACTCCTGTCCTCATTGTGGAAGAGGTTTTACGCAGAAAGGATCACTTCAAGGACATATTAGAACTCATACAGGATTCAAACCTTATAGATGTGAGatttGTGGTAAAGAATGTACTACCTCAAGTGCGTTAGCTTTGCATCGTGCTAGAACAGGtcataataattttacaaaagTAGATGCTCCTGAAATAGAGAATGTCATTGTCGACGAATTAATGGAAACGGTTGAAGATGAAAATCTAGATGcgatcaaaattgaattaagcCCTCAGCCAGCCCCCACCGACCTTCCAACATCTTTAAAAGACTCCACTCGTAAGCTCTGCACCGTCTGCGGAAAAACTTTCTCCACAGCGAGCAAACTCCGCCTTCATATGCGTATTCATACAGGGGAAACGCCGTATAAGTGTCAATATTGTGCCAAGCGTTTTTCCACAAGGGGCCAACTCGTTGTCCATGTCCGAACTCACACTGGAGAGCGGCCTCATGTGTGCCACGTTTGCGGGAAAGGTTTCGCGCAGTCTAGTGTACTTAATACGCACATGAAGCTTCATACGGGAAGGCCAGAACAATGTCAAGTATGCCAGCAAAGATTTTGCAGACCAGCGGAGTTGAGGCTGCATATGAGAAAGCATACAGGAGAAAAGCCCTACCTCTGCACAGAATGTGGTCAAGCATTCATCCAGCGTTCACATTTGATGGAGCACATAAAAATCCACAGCGATGAACGTCCTTACAAGTGCCATCTTTGCGAACGAGCCTTCAAGCAGAGTTCATCTTTGAAGTCCCACATTCAAATCCATACCGGATACAAACCTTACAAGTGTTCGCAGTGCCCTTATGCCTGTCGACAGCCATATAGTCTTACTCAACATATGAAGCAACATGCTCAGGATGCTCCACAACCTAACAGACCACATGTTTGTCTTATTTGTCATAGGGCTTTTTCCACGATGGCCATGCTAACCTCACATTCTAGAAGTGTGCATCAAGCcatattttga
Protein Sequence: MKSVFLNSDDCGDSDIQLFKMFECCASIEISENDGLPAVICLACELRLNSAYNFRELCQRSNITLRKYIENAMRYNVKQEVANDNKNVIQDSEPIGETEIEYIESVFEDDIKSDNDEHNNENSDDSDEKPLKSRNKGKVILSSYDEEIVNQAIEETKKKNNKRRECIVCGFISSNSRGLSLHISHLHKELKERWCNICFEQVEDLASHSKEHNKARSFSCSLCEKSFSYQGHLTEHIRSHSVQRPYKCKECKKGFLSSRHLRVHERIHSGEKPYSCPHCGRGFTQKGSLQGHIRTHTGFKPYRCEICGKECTTSSALALHRARTGHNNFTKVDAPEIENVIVDELMETVEDENLDAIKIELSPQPAPTDLPTSLKDSTRKLCTVCGKTFSTASKLRLHMRIHTGETPYKCQYCAKRFSTRGQLVVHVRTHTGERPHVCHVCGKGFAQSSVLNTHMKLHTGRPEQCQVCQQRFCRPAELRLHMRKHTGEKPYLCTECGQAFIQRSHLMEHIKIHSDERPYKCHLCERAFKQSSSLKSHIQIHTGYKPYKCSQCPYACRQPYSLTQHMKQHAQDAPQPNRPHVCLICHRAFSTMAMLTSHSRSVHQAIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -